def __init__(self, para, creator, valid, mapping, valid_batch, valid_iter,
input_key):
self.para = para
network = creator(para)
temp_err = 0
for i in range(valid_iter):
data = valid.next_minibatch(valid_batch, input_map=mapping(valid))
temp_err += network.test_minibatch(data)
self.accuracy = 1 - temp_err / valid_iter
model_name = os.path.join('module', '_'.join(map(str, para)))
network.model.save(model_name)
cpu_timer = cntk.load_model(model_name, device=cntk.cpu())
time_cost = []
for i in range(valid_iter):
data = valid.next_minibatch(valid_batch, input_map=mapping(valid))
arr = numpy.array(data[input_key].as_sequences())
arr = numpy.reshape(arr, (-1, ) + input_key.shape)
current_time = time.clock()
cpu_timer.eval(arr, device=cntk.cpu())
current_time = time.clock() - current_time
time_cost.append(current_time)
self.time = numpy.mean(time_cost)
def test_to_sequence_basic(device_id):
dev = cntk_device(device_id)
x = C.input_variable((C.FreeDimension, 2))
x_seq = C.to_sequence(x)
assert len(x_seq.dynamic_axes) == 2
x_data = np.asarray([[[1, 2], [-1000, -1000]], [[3, 4], [5, 6]]], dtype=np.float32)
result = x_seq.eval({x : x_data}, device=dev)
assert np.array_equal(result, x_data)
x = C.input_variable((C.FreeDimension, 2, 3), is_sparse=True)
x_seq_lens = C.input_variable(())
x_seq = C.to_sequence(x, x_seq_lens)
seq1_data = [[[0, 1, 1], [0, 1, 0]], [[1, 0, 0], [1, 0, 1]]]
csr_seq1 = _to_csr(seq1_data)
ndarrayview1 = C.NDArrayView.from_csr(csr_seq1, shape=(2, 2, 3), device=C.cpu())
seq2_data = [[0, 1, 1], [1, 1, 0]]
csr_seq2 = _to_csr([seq2_data, [[0, 0, 0], [0, 0, 0]]])
ndarrayview2 = C.NDArrayView.from_csr(csr_seq2, shape=(2, 2, 3), device=C.cpu())
x_data = C.Value.create(C.input_variable((2, 2, 3), is_sparse=True), [ndarrayview1, ndarrayview2], device=dev).data
x_seq_lens_data = np.asarray([2, 1], dtype=np.float32)
result = x_seq.eval({x : x_data, x_seq_lens : x_seq_lens_data}, device=dev, as_numpy=False)
result_dense = _to_dense(result, True)
assert np.array_equal(result_dense[0], seq1_data)
assert np.array_equal(result_dense[1], [seq2_data])
def test_to_sequence_basic(device_id):
dev = cntk_device(device_id)
x = C.input_variable((C.FreeDimension, 2))
x_seq = C.to_sequence(x)
assert len(x_seq.dynamic_axes) == 2
x_data = np.asarray([[[1, 2], [-1000, -1000]], [[3, 4], [5, 6]]], dtype=np.float32)
result = x_seq.eval({x : x_data}, device=dev)
assert np.array_equal(result, x_data)
x = C.input_variable((C.FreeDimension, 2, 3), is_sparse=True)
x_seq_lens = C.input_variable(())
x_seq = C.to_sequence(x, x_seq_lens)
seq1_data = [[[0, 1, 1], [0, 1, 0]], [[1, 0, 0], [1, 0, 1]]]
csr_seq1 = _to_csr(seq1_data)
ndarrayview1 = C.NDArrayView.from_csr(csr_seq1, shape=(2, 2, 3), device=C.cpu())
seq2_data = [[0, 1, 1], [1, 1, 0]]
csr_seq2 = _to_csr([seq2_data, [[0, 0, 0], [0, 0, 0]]])
ndarrayview2 = C.NDArrayView.from_csr(csr_seq2, shape=(2, 2, 3), device=C.cpu())
x_data = C.Value.create(C.input_variable((2, 2, 3), is_sparse=True), [ndarrayview1, ndarrayview2], device=dev).data
x_seq_lens_data = np.asarray([2, 1], dtype=np.float32)
result = x_seq.eval({x : x_data, x_seq_lens : x_seq_lens_data}, device=dev, as_numpy=False)
result_dense = _to_dense(result, True)
assert np.array_equal(result_dense[0], seq1_data)
assert np.array_equal(result_dense[1], [seq2_data])
def test_set_excluded_devices():
if len(C.device.all_devices()) == 1:
return;
assert C.try_set_default_device(C.cpu(), False)
assert C.try_set_default_device(C.gpu(0), False)
C.set_excluded_devices([C.cpu()])
assert not C.try_set_default_device(C.cpu(), False)
C.set_excluded_devices([])
assert C.try_set_default_device(C.cpu(), False)
def test_set_excluded_devices():
if len(C.device.all_devices()) == 1:
return
assert C.try_set_default_device(C.cpu(), False)
assert C.try_set_default_device(C.gpu(0), False)
C.set_excluded_devices([C.cpu()])
assert not C.try_set_default_device(C.cpu(), False)
C.set_excluded_devices([])
assert C.try_set_default_device(C.cpu(), False)
def test_2d_sparse_sequences_value(device_id):
dev = cntk_device(device_id)
seq1_data = [[[0, 1, 1], [0, 1, 0]], [[1, 0, 0], [1, 0, 1]]]
csr_seq1 = _to_csr(seq1_data)
ndarrayview1 = C.NDArrayView.from_csr(csr_seq1, shape=(2, 2, 3), device=C.cpu())
seq2_data = [[0, 1, 1], [1, 1, 0]]
csr_seq2 = _to_csr(seq2_data)
ndarrayview2 = C.NDArrayView.from_csr(csr_seq2, shape=(1, 2, 3), device=C.cpu())
x = C.sequence.input_variable((2, 3))
sequence_value = C.Value.create(x, [ndarrayview1, ndarrayview2], device=dev)
assert np.array_equal(_to_dense(sequence_value.data), [seq1_data, [seq2_data, [[0, 0, 0], [0, 0, 0]]]])
def test_output_subset_evaluation(device_id):
try:
gpu_device = C.gpu(0)
except ValueError:
pytest.skip('Test only runs when GPU available')
device = cntk_device(device_id)
x1 = C.input_variable(shape=())
op1 = C.constant(value=1, shape=(1), device=device) + (C.constant(value=1, shape=(1), device=device) + x1)
x2 = C.input_variable(shape=(1))
# Deliberately locate the parameter on a different device
# instead of the actual compute target device, so that
# if we try to use this parameter, it results in an error
if (device.type() == 0):
parameter_device = gpu_device
else:
parameter_device = C.cpu()
p = C.parameter(shape=(1), init=C.glorot_uniform(), device=parameter_device)
op2 = (x2 - C.constant(value=10, shape=(1), device=device)) - p
op = C.combine([op1, op2]);
_, result = op.forward({x1 : np.asarray([1, 2, 3])}, [op1], device=device)
assert np.array_equal(result[op1], np.asarray([[3], [4], [5]]))
def convert(model_path):
device = C.cpu()
model = C.Function.load(model_path, device=device)
# Replace all python proposal layer user-functions with native proposal layer
# user functions.
return clone_with_native_proposal_layer(model)
def convert(model_path):
device = C.cpu()
model = C.Function.load(model_path, device=device)
# Replace all python proposal layer user-functions with native proposal layer
# user functions.
return clone_with_native_proposal_layer(model)
def test_native_convolution(tmpdir):
# this test needs native binary convolution library built with halide.
if not C.contrib.netopt.native_convolve_function_registered:
pytest.skip()
z = _create_convolution_model()
binz = qc.convert_to_binary_convolution(z, _filter)
# save and load to transfer the model to CPU device as native binary
# convolution does not run on GPU yet.
model_file = str(tmpdir / ('binary_model.cmf'))
binz.save(model_file)
eval_device = C.cpu()
model = C.Function.load(model_file, device=eval_device)
# convert to native halide implementation.
native_binz = qc.convert_to_native_binary_convolution(model)
functions = C.logging.graph.depth_first_search(
native_binz, (lambda x : type(x) == C.Function and x.op_name =='BinaryConvolveOp') , depth = 0)
assert(len(functions) == 3)
img_data = np.reshape(dat, (1, 1, 28, 28))
res = native_binz.eval(img_data, device=eval_device)
assert(len(res) > 0) # evaluation should work with the new model.
def test_native_convolution(tmpdir):
# this test needs native binary convolution library built with halide.
if not C.contrib.netopt.native_convolve_function_registered:
pytest.skip()
z = _create_convolution_model()
binz = qc.convert_to_binary_convolution(z, _filter)
# save and load to transfer the model to CPU device as native binary
# convolution does not run on GPU yet.
model_file = str(tmpdir / ('binary_model.cmf'))
binz.save(model_file)
eval_device = C.cpu()
model = C.Function.load(model_file, device=eval_device)
# convert to native halide implementation.
native_binz = qc.convert_to_native_binary_convolution(model)
functions = C.logging.graph.depth_first_search(
native_binz, (lambda x : type(x) == C.Function and x.op_name =='BinaryConvolveOp') , depth = 0)
assert(len(functions) == 3)
img_data = np.reshape(dat, (1, 1, 28, 28))
res = native_binz.eval(img_data, device=eval_device)
assert(len(res) > 0) # evaluation should work with the new model.
def test_output_subset_evaluation(device_id):
try:
gpu_device = C.gpu(0)
except ValueError:
pytest.skip('Test only runs when GPU available')
device = cntk_device(device_id)
x1 = C.input_variable(shape=())
op1 = C.constant(value=1, shape=(1), device=device) + (
C.constant(value=1, shape=(1), device=device) + x1)
x2 = C.input_variable(shape=(1))
# Deliberately locate the parameter on a different device
# instead of the actual compute target device, so that
# if we try to use this parameter, it results in an error
if (device.type() == 0):
parameter_device = gpu_device
else:
parameter_device = C.cpu()
p = C.parameter(shape=(1),
init=C.glorot_uniform(),
device=parameter_device)
op2 = (x2 - C.constant(value=10, shape=(1), device=device)) - p
op = C.combine([op1, op2])
_, result = op.forward({x1: np.asarray([1, 2, 3])}, [op1], device=device)
assert np.array_equal(result[op1], np.asarray([[3], [4], [5]]))
def test_cpu_and_gpu_devices():
device = C.cpu()
assert device.type() == C.device.DeviceKind.CPU
assert device.id() == 0
for i in range(len(C.device.all_devices()) - 1):
device = C.gpu(i)
assert device.type() == C.device.DeviceKind.GPU
assert device.id() == i
def test(n_fold=4):
input_xs = [np.empty([922, 93], dtype=np.float32)]
input_xs, _ = fold_batch(xs=input_xs, n_fold=n_fold)
cntk.device.try_set_default_device(cntk.cpu())
nn_model = CuteModel(dim_x=93*n_fold, dim_y=199*n_fold)
t1 = time.time()
output = nn_model.trainer.model.eval(input_xs)
print(output[0].shape, time.time()-t1)
def test_cpu_and_gpu_devices():
device = C.cpu()
assert device.type() == C.device.DeviceKind.CPU
assert device.id() == 0
for i in range(len(C.device.all_devices()) - 1):
device = C.gpu(i)
assert device.type() == C.device.DeviceKind.GPU
assert device.id() == i
def test_use_default_device():
# this will release any previous held device locks
C.try_set_default_device(C.cpu(), False)
q = Queue()
p = Process(target=_use_default_device, args=(q,))
p.start()
p.join()
assert p.exitcode == 0
assert q.get()
def test_set_cpu_as_default_device():
device = C.cpu()
assert not is_locked(device)
assert not C.try_set_default_device(device, True)
assert not is_locked(device)
assert C.try_set_default_device(device)
assert C.try_set_default_device(device, False)
assert not is_locked(device)
assert device == C.use_default_device()
def test_use_default_device():
# this will release any previous held device locks
C.try_set_default_device(C.cpu(), False)
q = Queue()
p = Process(target=_use_default_device, args=(q, ))
p.start()
p.join()
assert p.exitcode == 0
assert q.get()
def test_set_cpu_as_default_device():
device = C.cpu()
assert not is_locked(device)
assert not C.try_set_default_device(device, True)
assert not is_locked(device)
assert C.try_set_default_device(device)
assert C.try_set_default_device(device, False)
assert not is_locked(device)
assert device == C.use_default_device()
def test_lstm_over_lstm_thought_vectors_2(device_id):
dev = cntk_device(device_id)
input_vocab_size=3
emb_dim = 2
hidden_dim = 2
num_labels = 2
utterances_input = C.sequence.input_variable((input_vocab_size), is_sparse=True, name='utterances')
conversation_lengths_input = C.input_variable((), name='conversation_sequence_lengths')
label_input = C.sequence.input_variable(num_labels, is_sparse=True, sequence_axis=C.Axis('label_sequence'), name='labels')
with C.default_options(initial_state=0.1):
model = C.layers.Embedding(emb_dim, name='embed')(utterances_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.sequence.last(model)
model = C.user_function(UtteranceBatchReshape(model, conversation_lengths_input))
model = C.to_sequence_like(model, label_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.layers.Dense(num_labels, name='classify')(model)
z = model
ce = C.cross_entropy_with_softmax(z, label_input)
sentinel_utt_data = C.NDArrayView.from_csr(_to_csr([[0, 0, 1]]), device=C.cpu())
c1_utt1_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 1], [0, 1, 0], [1, 0, 0]]), device=C.cpu())
c1_utt2_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 0], [0, 1, 1]]), device=C.cpu())
c1_utt3_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 1], [0, 1, 0]]), device=C.cpu())
c2_utt1_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 1]]), device=C.cpu())
c3_utt1_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 0], [0, 1, 1], [1, 0, 0]]), device=C.cpu())
c3_utt2_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 0]]), device=C.cpu())
all_utt_data = C.Value.create(C.sequence.input_variable((input_vocab_size), is_sparse=True), [c1_utt1_data, c1_utt2_data, c1_utt3_data, c2_utt1_data, sentinel_utt_data, sentinel_utt_data, c3_utt1_data, c3_utt2_data, sentinel_utt_data], device=C.cpu()).data
conversation_lengths_data = np.asarray([3, 1, 2], dtype=np.float32)
seq1_label_data = [[0, 1], [0, 1], [1, 0]]
seq2_label_data = [[1, 0]]
seq3_label_data = [[1, 0], [0, 1]]
label_data = [_to_csr(seq1_label_data), _to_csr(seq2_label_data), _to_csr(seq3_label_data)]
param_grads, loss_result = ce.grad({utterances_input : all_utt_data, label_input : label_data, conversation_lengths_input : conversation_lengths_data},
wrt=ce.parameters, outputs=[ce], as_numpy=False)
loss_result = loss_result.as_sequences()
absolute_tolerance = 0.01
assert np.allclose(loss_result[0], [[0.678914], [0.668076], [0.728129]], atol=absolute_tolerance)
assert np.allclose(loss_result[1], [[0.679029]], atol=absolute_tolerance)
assert np.allclose(loss_result[2], [[0.705393], [0.674243]], atol=absolute_tolerance)
def test_lstm_over_lstm_thought_vectors_2(device_id):
dev = cntk_device(device_id)
input_vocab_size=3
emb_dim = 2
hidden_dim = 2
num_labels = 2
utterances_input = C.sequence.input_variable((input_vocab_size), is_sparse=True, name='utterances')
conversation_lengths_input = C.input_variable((), name='conversation_sequence_lengths')
label_input = C.sequence.input_variable(num_labels, is_sparse=True, sequence_axis=C.Axis('label_sequence'), name='labels')
with C.default_options(initial_state=0.1):
model = C.layers.Embedding(emb_dim, name='embed')(utterances_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.sequence.last(model)
model = C.user_function(UtteranceBatchReshape(model, conversation_lengths_input))
model = C.to_sequence_like(model, label_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.layers.Dense(num_labels, name='classify')(model)
z = model
ce = C.cross_entropy_with_softmax(z, label_input)
sentinel_utt_data = C.NDArrayView.from_csr(_to_csr([[0, 0, 1]]), device=C.cpu())
c1_utt1_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 1], [0, 1, 0], [1, 0, 0]]), device=C.cpu())
c1_utt2_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 0], [0, 1, 1]]), device=C.cpu())
c1_utt3_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 1], [0, 1, 0]]), device=C.cpu())
c2_utt1_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 1]]), device=C.cpu())
c3_utt1_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 0], [0, 1, 1], [1, 0, 0]]), device=C.cpu())
c3_utt2_data = C.NDArrayView.from_csr(_to_csr([[0, 1, 0]]), device=C.cpu())
all_utt_data = C.Value.create(C.sequence.input_variable((input_vocab_size), is_sparse=True), [c1_utt1_data, c1_utt2_data, c1_utt3_data, c2_utt1_data, sentinel_utt_data, sentinel_utt_data, c3_utt1_data, c3_utt2_data, sentinel_utt_data], device=C.cpu()).data
conversation_lengths_data = np.asarray([3, 1, 2], dtype=np.float32)
seq1_label_data = [[0, 1], [0, 1], [1, 0]]
seq2_label_data = [[1, 0]]
seq3_label_data = [[1, 0], [0, 1]]
label_data = [_to_csr(seq1_label_data), _to_csr(seq2_label_data), _to_csr(seq3_label_data)]
param_grads, loss_result = ce.grad({utterances_input : all_utt_data, label_input : label_data, conversation_lengths_input : conversation_lengths_data},
wrt=ce.parameters, outputs=[ce], as_numpy=False)
loss_result = loss_result.as_sequences()
absolute_tolerance = 0.01
assert np.allclose(loss_result[0], [[0.678914], [0.668076], [0.728129]], atol=absolute_tolerance)
assert np.allclose(loss_result[1], [[0.679029]], atol=absolute_tolerance)
assert np.allclose(loss_result[2], [[0.705393], [0.674243]], atol=absolute_tolerance)
def test_native_binary_function():
# user functions need to be registered before being callable by python
if not nopt.native_convolve_function_registered:
pytest.skip("Could not find {0} library. "
"Please check if HALIDE_PATH is configured properly "
"and try building {1} again".format(
'Cntk.BinaryConvolution-' + C.__version__.rstrip('+'),
'Extnsibiliy\BinaryConvolution'))
# be sure to only run on CPU, binary convolution does not have GPU support for now
dev = C.cpu()
# create an arbitrary input mimicking a realistic cifar input
x = input((64, 28, 28))
# random filter weights for testing
w = parameter((64, 64, 3, 3),
init=np.reshape(2 * (np.random.rand(64 * 64 * 3 * 3) - .5),
(64, 64, 3, 3)),
dtype=np.float32,
device=dev)
# set the convolution parameters by passing in an attribute dictionary
#attributes = {'stride' : 1, 'padding' : False, 'size' : 3}
attributes = {
'stride': 1,
'padding': False,
'size': 3,
'h': 28,
'w': 28,
'channels': 64,
'filters': 64
}
# define the binary convolution op
op = ops.native_user_function('NativeBinaryConvolveFunction', [w, x],
attributes, 'native_binary_convolve')
# also define an op using python custom functions that should have the same output
op2 = C.convolution(CustomMultibitKernel(w, 1),
CustomSign(x),
auto_padding=[False])
# create random input data
x_data = NDArrayView.from_dense(np.asarray(np.reshape(
2 * (np.random.rand(64 * 28 * 28) - .5), (64, 28, 28)),
dtype=np.float32),
device=dev)
# evaluate the CPP binary convolve
result = op.eval({x: x_data}, device=dev)
# evaluate the python emulator
result2 = op2.eval({x: x_data}, device=dev)
native_times_primitive = op.find_by_name('native_binary_convolve')
# assert that both have the same result
'''
def test_ndarray_properties():
ndav = C.NDArrayView((2, 3), np.float32, device=C.cpu())
dev = ndav.device
assert isinstance(dev, C.DeviceDescriptor)
assert str(dev) == 'CPU'
assert ndav.is_read_only == False
assert ndav.is_sparse == False
assert ndav.dtype == np.float32
def test_value_properties():
ndav = C.NDArrayView((1, 2, 3), np.float32, device=C.cpu())
val = C.Value(batch=ndav)
dev = val.device
assert isinstance(dev, C.DeviceDescriptor)
assert str(dev) == 'CPU'
assert val.is_read_only == False
assert val.is_sparse == False
assert val.dtype == np.float32
def test_lstm_over_lstm_thought_vectors(device_id):
dev = cntk_device(device_id)
input_vocab_size=3
emb_dim = 2
hidden_dim = 2
num_labels = 2
x_seq_input = C.sequence.input_variable((C.FreeDimension, input_vocab_size), is_sparse=True, name='features')
label_seq_input = C.sequence.input_variable(num_labels, is_sparse=True, sequence_axis=C.Axis('label_sequence'), name='labels')
with C.default_options(initial_state=0.1):
model = C.layers.Embedding(emb_dim, name='embed')(x_seq_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.sequence.last(model)
model = C.to_sequence_like(model, label_seq_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.layers.Dense(num_labels, name='classify')(model)
z = model
ce = C.cross_entropy_with_softmax(z, label_seq_input)
seq1_data = [[[0, 1, 1], [0, 1, 0], [1, 0, 0]], [[1, 1, 0], [0, 0, 1], [1, 0, 1]], [[1, 0, 0], [0, 0, 1], [1, 1, 0]]]
csr_seq1 = _to_csr(seq1_data)
ndarrayview1 = C.NDArrayView.from_csr(csr_seq1, shape=(3, 3, 3), device=C.cpu())
seq2_data = [[[0, 0, 1], [0, 1, 1], [1, 0, 1]], [[0, 1, 0], [1, 0, 1], [0, 0, 0]]]
csr_seq2 = _to_csr(seq2_data)
ndarrayview2 = C.NDArrayView.from_csr(csr_seq2, shape=(2, 3, 3), device=C.cpu())
x_seq_data = C.Value.create(C.sequence.input_variable((3, 3), is_sparse=True), [ndarrayview1, ndarrayview2], device=C.cpu()).data
seq1_label_data = [[0, 1], [0, 1], [1, 0]]
seq2_label_data = [[1, 0], [0, 1]]
label_seq_data = [_to_csr(seq1_label_data), _to_csr(seq2_label_data)]
param_grads, loss_result = ce.grad({x_seq_input : x_seq_data, label_seq_input : label_seq_data},
wrt=ce.parameters, outputs=[ce], as_numpy=False)
loss_result = loss_result.as_sequences()
absolute_tolerance = 0.02
assert np.allclose(loss_result[0], [[0.67126], [0.676331], [0.765814]], atol=absolute_tolerance)
assert np.allclose(loss_result[1], [[0.685199], [0.681736]], atol=absolute_tolerance)
def test_lstm_over_lstm_thought_vectors(device_id):
dev = cntk_device(device_id)
input_vocab_size=3
emb_dim = 2
hidden_dim = 2
num_labels = 2
x_seq_input = C.sequence.input_variable((C.FreeDimension, input_vocab_size), is_sparse=True, name='features')
label_seq_input = C.sequence.input_variable(num_labels, is_sparse=True, sequence_axis=C.Axis('label_sequence'), name='labels')
with C.default_options(initial_state=0.1):
model = C.layers.Embedding(emb_dim, name='embed')(x_seq_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.sequence.last(model)
model = C.to_sequence_like(model, label_seq_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim), go_backwards=False)(model)
model = C.layers.Dense(num_labels, name='classify')(model)
z = model
ce = C.cross_entropy_with_softmax(z, label_seq_input)
seq1_data = [[[0, 1, 1], [0, 1, 0], [1, 0, 0]], [[1, 1, 0], [0, 0, 1], [1, 0, 1]], [[1, 0, 0], [0, 0, 1], [1, 1, 0]]]
csr_seq1 = _to_csr(seq1_data)
ndarrayview1 = C.NDArrayView.from_csr(csr_seq1, shape=(3, 3, 3), device=C.cpu())
seq2_data = [[[0, 0, 1], [0, 1, 1], [1, 0, 1]], [[0, 1, 0], [1, 0, 1], [0, 0, 0]]]
csr_seq2 = _to_csr(seq2_data)
ndarrayview2 = C.NDArrayView.from_csr(csr_seq2, shape=(2, 3, 3), device=C.cpu())
x_seq_data = C.Value.create(C.sequence.input_variable((3, 3), is_sparse=True), [ndarrayview1, ndarrayview2], device=C.cpu()).data
seq1_label_data = [[0, 1], [0, 1], [1, 0]]
seq2_label_data = [[1, 0], [0, 1]]
label_seq_data = [_to_csr(seq1_label_data), _to_csr(seq2_label_data)]
param_grads, loss_result = ce.grad({x_seq_input : x_seq_data, label_seq_input : label_seq_data},
wrt=ce.parameters, outputs=[ce], as_numpy=False)
loss_result = loss_result.as_sequences()
absolute_tolerance = 0.02
assert np.allclose(loss_result[0], [[0.67126], [0.676331], [0.765814]], atol=absolute_tolerance)
assert np.allclose(loss_result[1], [[0.685199], [0.681736]], atol=absolute_tolerance)
def test_native_user_function(tmpdir):
if not C.cntk_py.is_native_user_function_registered('NativeUserTimesOp'):
C.ops.register_native_user_function(
'NativeUserTimesOp',
'Cntk.ExtensibilityExamples-' + C.__version__.rstrip('+'),
'CreateUserTimesFunction')
dev = C.cpu()
x = C.input_variable((2))
w = C.parameter((2, 2),
init=np.asarray([[0.5, 2], [-0.5, 1.5]], dtype=np.float32),
device=dev)
attributes = {
'param_rank': 2,
'padding': True,
'none': None,
'nested lists': [[1, 2, 3], [4, 5, 6]],
'string': 'string',
'some data': np.arange(1, 10, dtype=np.float32).reshape((3, 3))
}
def verify_attributes(udf):
for k, v in attributes.items():
if not isinstance(v, np.ndarray):
assert udf.attributes[k] == v
else:
assert (udf.attributes[k] == v).all()
op = C.ops.native_user_function('NativeUserTimesOp', [w, x], attributes,
'native_user_times_function')
verify_attributes(op.owner)
filepath = str(tmpdir / 'test_native_user_function.dat')
op.save(filepath)
op_reloaded = Function.load(filepath, device=dev)
x_data = C.NDArrayView.from_dense(np.asarray([[0.1, 0.2], [-0.1, 0.3]],
dtype=np.float32),
device=dev)
result = op_reloaded.eval({op_reloaded.arguments[0]: x_data}, device=dev)
assert np.allclose(result, [[-0.05, 0.5], [-0.2, 0.25]])
native_times_primitive = op_reloaded.find_by_name(
'native_user_times_function')
verify_attributes(native_times_primitive)
def test_set_gpu_as_default_device():
if len(C.device.all_devices()) == 1:
return
# this will release any previous held device locks
C.try_set_default_device(C.cpu(), False)
for i in range(len(C.device.all_devices()) - 1):
device = C.gpu(i)
assert C.try_set_default_device(device, False)
assert not is_locked(device)
assert device == C.use_default_device()
if not device.is_locked():
assert not is_locked(device)
assert C.try_set_default_device(device, True)
assert device == C.use_default_device()
assert is_locked(device)
def test_set_gpu_as_default_device():
if len(C.device.all_devices()) == 1:
return;
# this will release any previous held device locks
C.try_set_default_device(C.cpu(), False)
for i in range(len(C.device.all_devices()) - 1):
device = C.gpu(i)
assert C.try_set_default_device(device, False)
assert not is_locked(device)
assert device == C.use_default_device()
if not device.is_locked():
assert not is_locked(device)
assert C.try_set_default_device(device, True)
assert device == C.use_default_device()
assert is_locked(device)
def test_override_serialize(tmpdir):
dev = C.cpu()
a, b = 1.2322341, -0.29084
op = MyPlusPlus([C.constant(a), C.constant(b)], '++')
op = MyPlusPlus([op, op], '+++')
op = MyPlusPlus([op, op], '++++')
op = C.user_function(op)
result1 = op.eval({}, device=dev)
filepath = str(tmpdir / 'test_udf_with_renamed_deserialize.dat')
op.save(filepath)
op_reloaded = Function.load(filepath, device=dev)
assert result1 == op_reloaded.eval({}, device=dev)
def test_override_serialize(tmpdir):
dev = C.cpu()
a, b = 1.2322341, -0.29084
op = MyPlusPlus([C.constant(a), C.constant(b)], '++')
op = MyPlusPlus([op, op], '+++')
op = MyPlusPlus([op, op], '++++')
op = C.user_function(op)
result1 = op.eval({}, device=dev)
filepath = str(tmpdir / 'test_udf_with_renamed_deserialize.dat')
op.save(filepath)
op_reloaded = Function.load(filepath, device=dev)
assert result1 == op_reloaded.eval({}, device=dev)
def build_test_function():
dev = C.cpu()
w_value = np.asarray([[0.5, 2], [-0.5, 1.5]]).astype(np.float32)
c1_value = 2.718
c2_value = -3.141
if not C.cntk_py.is_native_user_function_registered('NativeUserTimesOp'):
C.ops.register_native_user_function('NativeUserTimesOp', 'Cntk.ExtensibilityExamples-' + C.__version__.rstrip('+'), 'CreateUserTimesFunction')
x = C.input_variable((2))
w = C.parameter((2, 2), init=w_value, device=dev)
op = C.user_function(MyPlus(x, C.constant(c1_value)))
op = C.ops.native_user_function('NativeUserTimesOp', [w, op], user_function_instance_name='my_times')
return dev, w_value, c1_value, c2_value, C.user_function(MyPlus(op, C.constant(c2_value)))
def build_test_function():
dev = C.cpu()
w_value = np.asarray([[0.5, 2], [-0.5, 1.5]]).astype(np.float32)
c1_value = 2.718
c2_value = -3.141
if not C.cntk_py.is_native_user_function_registered('NativeUserTimesOp'):
C.ops.register_native_user_function('NativeUserTimesOp', 'Cntk.ExtensibilityExamples-' + C.__version__.rstrip('+'), 'CreateUserTimesFunction')
x = C.input_variable((2))
w = C.parameter((2, 2), init=w_value, device=dev)
op = C.user_function(MyPlus(x, C.constant(c1_value)))
op = C.ops.native_user_function('NativeUserTimesOp', [w, op], user_function_instance_name='my_times')
return dev, w_value, c1_value, c2_value, C.user_function(MyPlus(op, C.constant(c2_value)))
def evaluate(model_path):
# ProposalLayer currently only runs on the CPU
eval_device = C.cpu()
model = C.Function.load(model_path, device=eval_device)
from FasterRCNN.FasterRCNN_config import cfg as detector_cfg
from utils.configs.AlexNet_config import cfg as network_cfg
from utils.configs.Grocery_config import cfg as dataset_cfg
from utils.config_helpers import merge_configs
from FasterRCNN.FasterRCNN_train import prepare
from FasterRCNN.FasterRCNN_eval import compute_test_set_aps
cfg = merge_configs([detector_cfg, network_cfg, dataset_cfg])
cfg["CNTK"].FORCE_DETERMINISTIC = True
prepare(cfg, False)
eval_results = compute_test_set_aps(model, cfg)
meanAP = np.nanmean(list(eval_results.values()))
return meanAP
def evaluate(model_path):
# ProposalLayer currently only runs on the CPU
eval_device = C.cpu()
model = C.Function.load(model_path, device=eval_device)
from FasterRCNN.FasterRCNN_config import cfg as detector_cfg
from utils.configs.AlexNet_config import cfg as network_cfg
from utils.configs.Grocery_config import cfg as dataset_cfg
from utils.config_helpers import merge_configs
from FasterRCNN.FasterRCNN_train import prepare
from FasterRCNN.FasterRCNN_eval import compute_test_set_aps
cfg = merge_configs([detector_cfg, network_cfg, dataset_cfg])
cfg["CNTK"].FORCE_DETERMINISTIC = True
prepare(cfg, False)
eval_results = compute_test_set_aps(model, cfg)
meanAP = np.nanmean(list(eval_results.values()))
return meanAP
def test_native_binary_function():
# user functions need to be registered before being callable by python
if not nopt.native_convolve_function_registered:
pytest.skip("Could not find {0} library. "
"Please check if HALIDE_PATH is configured properly "
"and try building {1} again"
.format('Cntk.BinaryConvolution-' + C.__version__.rstrip('+'),
'Extnsibiliy\\BinaryConvolution'))
# be sure to only run on CPU, binary convolution does not have GPU support for now
dev = C.cpu()
# create an arbitrary input mimicking a realistic cifar input
x = input((64, 28, 28))
# random filter weights for testing
w = parameter((64, 64, 3, 3), init=np.reshape(2*(np.random.rand(64*64*3*3)-.5), (64, 64, 3, 3)), dtype=np.float32, device=dev)
# set the convolution parameters by passing in an attribute dictionary
#attributes = {'stride' : 1, 'padding' : False, 'size' : 3}
attributes = {'stride' : 1,
'padding' : False,
'size' : 3,
'h' : 28,
'w' : 28,
'channels' : 64,
'filters' : 64 }
# define the binary convolution op
op = ops.native_user_function('NativeBinaryConvolveFunction', [w, x], attributes, 'native_binary_convolve')
# also define an op using python custom functions that should have the same output
op2 = C.convolution(CustomMultibitKernel(w, 1), CustomSign(x), auto_padding = [False])
# create random input data
x_data = NDArrayView.from_dense(np.asarray(np.reshape(2*(np.random.rand(64*28*28)-.5), (64, 28, 28)),dtype=np.float32), device=dev)
# evaluate the CPP binary convolve
result = op.eval({x : x_data}, device=dev)
# evaluate the python emulator
result2 = op2.eval({x : x_data}, device=dev)
native_times_primitive = op.find_by_name('native_binary_convolve')
# assert that both have the same result
'''
def test_native_user_function(tmpdir):
if not C.cntk_py.is_native_user_function_registered('NativeUserTimesOp'):
C.ops.register_native_user_function('NativeUserTimesOp', 'Cntk.ExtensibilityExamples-' + C.__version__.rstrip('+'), 'CreateUserTimesFunction')
dev = C.cpu()
x = C.input_variable((2))
w = C.parameter((2, 2), init=np.asarray([[0.5, 2], [-0.5, 1.5]], dtype=np.float32), device=dev)
attributes = {'param_rank': 2,
'padding': True,
'none': None,
'nested lists': [[1, 2, 3], [4, 5, 6]],
'string': 'string',
'some data': np.arange(1, 10, dtype=np.float32).reshape((3, 3))
}
def verify_attributes(udf):
for k, v in attributes.items():
if not isinstance(v, np.ndarray):
assert udf.attributes[k] == v
else:
assert (udf.attributes[k] == v).all()
op = C.ops.native_user_function('NativeUserTimesOp', [w, x], attributes, 'native_user_times_function')
verify_attributes(op.owner)
filepath = str(tmpdir / 'test_native_user_function.dat')
op.save(filepath)
op_reloaded = Function.load(filepath, device=dev)
x_data = C.NDArrayView.from_dense(np.asarray([[0.1, 0.2], [-0.1, 0.3]], dtype=np.float32), device=dev)
result = op_reloaded.eval({op_reloaded.arguments[0]: x_data}, device=dev)
assert np.allclose(result, [[-0.05, 0.5], [-0.2, 0.25]])
native_times_primitive = op_reloaded.find_by_name('native_user_times_function')
verify_attributes(native_times_primitive)
def test_native_binary_function():
# user functions need to be registered before being callable by python
ops.register_native_user_function(
'NativeBinaryConvolveFunction',
'Cntk.BinaryConvolutionExample-' + C.__version__.rstrip('+'),
'CreateBinaryConvolveFunction')
# be sure to only run on CPU, binary convolution does not have GPU support for now
dev = cpu()
# create an arbitrary input mimicking a realistic cifar input
x = input((64, 30, 30))
# random filter weights for testing
w = parameter((64, 64, 3, 3),
init=np.reshape(2 * (np.random.rand(64 * 64 * 3 * 3) - .5),
(64, 64, 3, 3)),
dtype=np.float32,
device=dev)
# set the convolution parameters by passing in an attribute dictionary
attributes = {'stride': 1, 'padding': False, 'size': 3}
# define the binary convolution op
op = ops.native_user_function('NativeBinaryConvolveFunction', [w, x],
attributes,
'native_binary_convolve_function')
# also define an op using python custom functions that should have the same output
op2 = C.convolution(CustomMultibitKernel(w, 1),
CustomSign(x),
auto_padding=[False])
# create random input data
x_data = NDArrayView.from_dense(np.asarray(np.reshape(
2 * (np.random.rand(64 * 30 * 30) - .5), (64, 30, 30)),
dtype=np.float32),
device=dev)
# evaluate the CPP binary convolve
result = op.eval({x: x_data}, device=dev)
# evaluate the python emulator
result2 = op2.eval({x: x_data}, device=dev)
native_times_primitive = op.find_by_name('native_binary_convolve_function')
# assert that both have the same result
assert np.allclose(result, result2, atol=0.001)
def test_native_binary_function():
# user functions need to be registered before being callable by python
ops.register_native_user_function('NativeBinaryConvolveFunction', 'Cntk.BinaryConvolutionExample-' + C.__version__.rstrip('+'), 'CreateBinaryConvolveFunction')
# be sure to only run on CPU, binary convolution does not have GPU support for now
dev = cpu()
# create an arbitrary input mimicking a realistic cifar input
x = input((64, 30, 30))
# random filter weights for testing
w = parameter((64, 64, 3, 3), init=np.reshape(2*(np.random.rand(64*64*3*3)-.5), (64, 64, 3, 3)), dtype=np.float32, device=dev)
# set the convolution parameters by passing in an attribute dictionary
attributes = {'stride' : 1, 'padding' : False, 'size' : 3}
# define the binary convolution op
op = ops.native_user_function('NativeBinaryConvolveFunction', [w, x], attributes, 'native_binary_convolve_function')
# also define an op using python custom functions that should have the same output
op2 = C.convolution(CustomMultibitKernel(w, 1), CustomSign(x), auto_padding = [False])
# create random input data
x_data = NDArrayView.from_dense(np.asarray(np.reshape(2*(np.random.rand(64*30*30)-.5), (64, 30, 30)),dtype=np.float32), device=dev)
# evaluate the CPP binary convolve
result = op.eval({x : x_data}, device=dev)
# evaluate the python emulator
result2 = op2.eval({x : x_data}, device=dev)
native_times_primitive = op.find_by_name('native_binary_convolve_function')
# assert that both have the same result
assert np.allclose(result, result2, atol=0.001)
def evaluate(model_path):
# ProposalLayer currently only runs on the CPU
eval_device = C.cpu()
model = C.Function.load(model_path, device=eval_device)
set_global_vars(False)
return eval_faster_rcnn_mAP(model)
def is_locked_cross_process(queue, device_id):
device = C.cpu() if device_id < 0 else C.gpu(device_id)
queue.put(device.is_locked())
from ConvNet_CIFAR10_DataAug import *
#############################
# main function boilerplate #
#############################
if __name__=='__main__':
model = create_binary_convolution_model()
z, criterion = get_z_and_criterion(model)
reader_train = create_reader(os.path.join(data_path, 'train_map.txt'), os.path.join(data_path, 'CIFAR-10_mean.xml'), True)
train_model(reader_train, z, criterion, max_epochs=80)
# save and load (as an illustration)
model_path = data_path + "/model.cmf"
model.save(model_path)
# We use the NativeBinaryConvolveFunction for testing the model, which currently only runs on the CPU
eval_device = C.cpu()
model = Function.load(model_path, device=eval_device)
# For testing, replace all python binary convolution user-functions with the fast Halide generated
# NativeBinaryConvolveFunction. Note, the NativeBinaryConvolveFunction currently only supports eval,
# and is thus not used for training.
model_with_native_binary_convolutions = clone_with_native_binary_convolutions(model)
_, criterion = get_z_and_criterion(model_with_native_binary_convolutions)
reader_test = create_reader(os.path.join(data_path, 'test_map.txt'), os.path.join(data_path, 'CIFAR-10_mean.xml'), False)
# TODO: The NativeBinaryConvolveFunction can currently only process one image at a time
evaluate(reader_test, criterion, device=eval_device, minibatch_size=1, max_samples=1000)
def setup_nn_model(model_path, dim_input=93, dim_output=199, n_fold=1):
cntk.device.try_set_default_device(cntk.cpu())
nn_model = CuteModel(dim_x=dim_input * n_fold, dim_y=dim_output * n_fold)
nn_model.trainer.restore_from_checkpoint(model_path)
return nn_model.trainer.model
def test_all_devices():
assert len(C.device.all_devices()) > 0
assert C.cpu() in C.device.all_devices()
if (len(C.device.all_devices()) > 1):
assert C.gpu(0) in C.device.all_devices()
def is_locked_cross_process(queue, device_id):
device = C.cpu() if device_id < 0 else C.gpu(device_id)
queue.put(device.is_locked())
def test_all_devices():
assert len(C.device.all_devices()) > 0
assert C.cpu() in C.device.all_devices()
if (len(C.device.all_devices()) > 1):
assert C.gpu(0) in C.device.all_devices()
#############################
if __name__ == '__main__':
model = create_binary_convolution_model()
z, criterion = get_z_and_criterion(model)
reader_train = create_reader(os.path.join(data_path, 'train_map.txt'),
os.path.join(data_path, 'CIFAR-10_mean.xml'),
True)
train_model(reader_train, z, criterion, max_epochs=80)
# save and load (as an illustration)
model_path = data_path + "/model.cmf"
model.save(model_path)
# We use the NativeBinaryConvolveFunction for testing the model, which currently only runs on the CPU
eval_device = C.cpu()
model = Function.load(model_path, device=eval_device)
# For testing, replace all python binary convolution user-functions with the fast Halide generated
# NativeBinaryConvolveFunction. Note, the NativeBinaryConvolveFunction currently only supports eval,
# and is thus not used for training.
model_with_native_binary_convolutions = clone_with_native_binary_convolutions(
model)
_, criterion = get_z_and_criterion(model_with_native_binary_convolutions)
reader_test = create_reader(os.path.join(data_path, 'test_map.txt'),
os.path.join(data_path, 'CIFAR-10_mean.xml'),
False)
# TODO: The NativeBinaryConvolveFunction can currently only process one image at a time
evaluate(reader_test,
### User inputs ###
network_list = ['action+','action','action_m','feature','GRP','GRP+','GRP_feature']
parser = argparse.ArgumentParser()
parser.add_argument('model_type', type=str, action='store', choices=network_list, help='The type of model to use')
parser.add_argument('--data-file', dest='data_file', type=str, action='store', default='data/training_human_data.json')
parser.add_argument('--gpu-id', dest='gpu_id', type=int, default=-2, help="""The GPU to use. -1 for CPU, -2 for default.""");
cmdargs = parser.parse_args(sys.argv[1:])
# Set device to run on
if cmdargs.gpu_id >= 0:
C.try_set_default_device(C.gpu(cmdargs.gpu_id))
elif cmdargs.gpu_id == -1:
C.try_set_default_device(C.cpu())
network = cmdargs.model_type
data_file = cmdargs.data_file
######################
### DATA INPUT ###
#######################
target_dist = 30
target_var = 50000
#######################
max_velocity = 0.31
learning_rate = 0.1
def test_lstm_over_lstm_thought_vectors(device_id):
previous_random_seed = C.cntk_py.get_random_seed()
C.cntk_py.reset_random_seed(0)
dev = cntk_device(device_id)
input_vocab_size = 3
emb_dim = 2
hidden_dim = 2
num_labels = 2
x_seq_input = C.sequence.input((C.FreeDimension, input_vocab_size),
is_sparse=True,
name='features')
label_seq_input = C.sequence.input(num_labels,
is_sparse=True,
sequence_axis=Axis('label_sequence'),
name='labels')
with C.default_options(initial_state=0.1):
model = C.layers.Embedding(emb_dim, name='embed')(x_seq_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim),
go_backwards=False)(model)
model = C.sequence.last(model)
model = C.to_sequence_like(model, label_seq_input)
model = C.layers.Recurrence(C.layers.LSTM(hidden_dim),
go_backwards=False)(model)
model = C.layers.Dense(num_labels, name='classify')(model)
z = model
ce = C.cross_entropy_with_softmax(z, label_seq_input)
seq1_data = [[[0, 1, 1], [0, 1, 0], [1, 0, 0]],
[[1, 1, 0], [0, 0, 1], [1, 0, 1]],
[[1, 0, 0], [0, 0, 1], [1, 1, 0]]]
csr_seq1 = _to_csr(seq1_data)
ndarrayview1 = C.NDArrayView.from_csr(csr_seq1,
shape=(3, 3, 3),
device=C.cpu())
seq2_data = [[[0, 0, 1], [0, 1, 1], [1, 0, 1]],
[[0, 1, 0], [1, 0, 1], [0, 0, 0]]]
csr_seq2 = _to_csr(seq2_data)
ndarrayview2 = C.NDArrayView.from_csr(csr_seq2,
shape=(2, 3, 3),
device=C.cpu())
x_seq_data = C.Value.create(C.sequence.input((3, 3), is_sparse=True),
[ndarrayview1, ndarrayview2],
device=C.cpu()).data
seq1_label_data = [[0, 1], [0, 1], [1, 0]]
seq2_label_data = [[1, 0], [0, 1]]
label_seq_data = [_to_csr(seq1_label_data), _to_csr(seq2_label_data)]
param_grads, loss_result = ce.grad(
{
x_seq_input: x_seq_data,
label_seq_input: label_seq_data
},
wrt=ce.parameters,
outputs=[ce],
as_numpy=False)
loss_result = loss_result.as_sequences()
# TODO: The tolerance here is inordinately high due to the non-determinism in initialization
# of parameters as the individual tests are not run in separate processes resulting in the
# addition or removal of tests to affect the random initialization of parameters in all other
# tests that do not explicitly specify the random seed. The tolerance should be lowered to
# 0.01 after this issue in the test infrastructure has been fixed.
absolute_tolerance = 0.02
assert np.allclose(loss_result[0], [[0.63504], [0.673343], [0.698446]],
atol=absolute_tolerance)
assert np.allclose(loss_result[1], [[0.772344], [0.64295]],
atol=absolute_tolerance)
C.cntk_py.reset_random_seed(previous_random_seed)
