def test_run_update_update_False(self):
lines = [
'https://github.com/tpope/vim-pathogen.git',
'https://github.com/vim-scripts/a.vim',
]
def if_exists(name):
return name == 'a.vim'
mock_subproc = Mock()
patch_lines = patch('download.load_lines', return_value=iter(lines))
patch_subproc = patch('download.subprocess.call', mock_subproc)
patch_exists = patch('download.bundle_exists', if_exists)
with nested(patch_lines, patch_subproc, patch_exists):
download.run(update=False)
mock_subproc.assert_called_with(['git', 'clone', lines[0]])
def run():
# download to this folder
current_folder = os.sep.join(__file__.split(os.sep)[:-1])
dpc_demo_data_path = os.path.join(current_folder, 'SOFC')
if not os.path.exists(dpc_demo_data_path):
zip_file_url = 'https://www.dropbox.com/s/963c4ymfmbjg5dm/SOFC.zip?dl=1'
import download
download.run()
# download_zip(zip_file_url, current_folder)
# 1. Set parameters
start_point = [1, 0]
first_image = 1
pixel_size = (55, 55)
focus_to_det = 1.46e6
scan_xstep = 0.1
scan_ystep = 0.1
scan_rows = 121
scan_cols = 121
energy = 19.5
roi = None
padding = 0
weighting = 1.
bad_pixels = None
solver = 'Nelder-Mead'
images = ImageSequence(dpc_demo_data_path + "/*.tif")
img_size = images[0].shape
ref_image = np.ones(img_size)
scale = True
negate = True
print('running dpc')
# 2. Use dpc.dpc_runner
phase, amplitude = dpc.dpc_runner(ref_image, images, start_point,
pixel_size, focus_to_det, scan_rows,
scan_cols, scan_xstep, scan_ystep,
energy, padding, weighting, solver, roi,
bad_pixels, negate, scale)
# 3. Save intermediate and final results
print('saving dpc output to disk in --> %s' % current_folder)
scipy.misc.imsave(os.path.join(current_folder, 'phase.jpg'), phase)
np.savetxt(os.path.join(current_folder, 'phase.txt'), phase)
scipy.misc.imsave(os.path.join(current_folder, 'amplitude.jpg'), amplitude)
np.savetxt(os.path.join(current_folder, 'amplitude.txt'), amplitude)
def run():
# download to this folder
current_folder = os.sep.join(__file__.split(os.sep)[:-1])
dpc_demo_data_path = os.path.join(current_folder, 'SOFC')
if not os.path.exists(dpc_demo_data_path):
zip_file_url = 'https://www.dropbox.com/s/963c4ymfmbjg5dm/SOFC.zip?dl=1'
import download
download.run()
# download_zip(zip_file_url, current_folder)
# 1. Set parameters
start_point = [1, 0]
first_image = 1
pixel_size = (55, 55)
focus_to_det = 1.46e6
scan_xstep = 0.1
scan_ystep = 0.1
scan_rows = 121
scan_cols = 121
energy = 19.5
roi = None
padding = 0
weighting = 1.
bad_pixels = None
solver = 'Nelder-Mead'
images = ImageSequence(dpc_demo_data_path + "/*.tif")
img_size = images[0].shape
ref_image = np.ones(img_size)
scale = True
negate = True
print('running dpc')
# 2. Use dpc.dpc_runner
phase, amplitude = dpc.dpc_runner(
ref_image, images, start_point, pixel_size, focus_to_det, scan_rows,
scan_cols, scan_xstep, scan_ystep, energy, padding, weighting, solver,
roi, bad_pixels, negate, scale)
# 3. Save intermediate and final results
print('saving dpc output to disk in --> %s' % current_folder)
scipy.misc.imsave(os.path.join(current_folder, 'phase.jpg'), phase)
np.savetxt(os.path.join(current_folder, 'phase.txt'), phase)
scipy.misc.imsave(os.path.join(current_folder, 'amplitude.jpg'), amplitude)
np.savetxt(os.path.join(current_folder, 'amplitude.txt'), amplitude)
def handle_download(uri, dest, kwargs): files = download.run(uri, dest) if len(files) == 1: deploy_file(os.path.join(dest, files[0]), kwargs) else: deploy_dir(dest, kwargs)
def handle_download(uri, dest, kwargs):
files = download.run(uri, dest)
if len(files) == 1:
deploy_file(os.path.join(dest, files[0]), kwargs)
else:
deploy_dir(dest, kwargs)
import os, sys
import cat, download, upload
# Main
if len(sys.argv) == 3:
command = sys.argv[1]
url = sys.argv[2]
# switch for commands
if command == "cat":
cat.run(url)
elif command == "download":
download.run(url)
elif command == "upload":
upload.run(url)
else:
print "Invalid command"
else:
print "Syntax: %s <command> <url>" % sys.argv[0]
def lfm_download(uri, dest, profile): if profile is not None: boto3.setup_default_session(profile_name=profile) download.run(uri, dest)
