def get(self, uuidname, cancertype, surType): checkplot = CheckGSVASurvivalSingleCancerType( gsxa_uuid=uuidname, cancertype=cancertype, surType=surType, name_uuid="cnvgenesetsurvivalsinglecancer_uuid", purpose="cnvgenesetimmunesinglecancer", rplot="cnv_geneset_immune_singlecancer.R", precol="preanalysised", gsxacol="preanalysised_cnvgeneset", ) res = checkplot.check_run() if res["run"]: checkplot.plot() return {"cnvgenesetimmunesinglecanceruuid": res["uuid"]}
def get(self, uuidname, cancertype, surType): checkplot = CheckGSVASurvivalSingleCancerType( gsxa_uuid=uuidname, cancertype=cancertype, surType=surType, name_uuid="gsvasurvivalsinglecancer_uuid", purpose="gsvasurvivalsinglecancer", rplot="gsva_survival_single_cancer.R", precol="preanalysised", gsxacol="preanalysised_gsva", ) res = checkplot.check_run() if res["run"]: checkplot.plot() return {"gsvasurvivalsinglecanceruuid": res["uuid"]}