def test_calc_bases_overlapped():
iv = Interval(50, 150)
iv_roverlap = [Interval(100, 200)]
assert ivt.calc_bases_overlapped(iv, iv_roverlap) == 50
iv_loverlap = [Interval(0, 100)]
assert ivt.calc_bases_overlapped(iv, iv_loverlap) == 50
iv_contained = [Interval(75, 125)]
assert ivt.calc_bases_overlapped(iv, iv_contained) == 50
iv_contains = [Interval(0, 200)]
assert ivt.calc_bases_overlapped(iv, iv_contains) == 100
def test_calc_bases_overlapped():
iv = Interval(50, 150)
iv_roverlap = [Interval(100, 200)]
assert ivt.calc_bases_overlapped(iv, iv_roverlap) == 50
iv_loverlap = [Interval(0, 100)]
assert ivt.calc_bases_overlapped(iv, iv_loverlap) == 50
iv_contained = [Interval(75, 125)]
assert ivt.calc_bases_overlapped(iv, iv_contained) == 50
iv_contains = [Interval(0, 200)]
assert ivt.calc_bases_overlapped(iv, iv_contains) == 100
def test_calc_based_overlapped_merged():
iv = Interval(50, 150)
iv_overlap = [Interval(50, 200), Interval(0, 100)]
assert ivt.calc_bases_overlapped(iv, iv_overlap) == 100
def test_calc_based_overlapped_merged():
iv = Interval(50, 150)
iv_overlap = [Interval(50, 200), Interval(0, 100)]
assert ivt.calc_bases_overlapped(iv, iv_overlap) == 100
