class ProvenanceContext(object): def __init__(self): self.config = Configuration() self.deps = Dependencies(self.config) def add(self, filepath, transient=False, provenance=None): """See :py:mod:`niprov.adding` """ return niprov.adding.add(filepath, transient, provenance, self.deps) def approve(self, filepath): """See :py:mod:`niprov.approval` """ return niprov.approval.approve(filepath, dependencies=self.deps) def backup(self): """See :py:mod:`niprov.exporting` """ return niprov.exporting.backup(self.deps) def compare(self, file1, file2): """See :py:mod:`niprov.comparing` """ return niprov.comparing.compare(file1, file2, dependencies=self.deps) def discover(self, root): """See :py:mod:`niprov.discovery` """ return niprov.discovery.discover(root, dependencies=self.deps) def export(self, images, medium, form, pipeline=False): """See :py:mod:`niprov.exporting` """ return niprov.exporting.export(images, medium, form, pipeline, self.deps) def get(self): """See :py:mod:`niprov.querying` """ return self.deps.getQuery() def importp(self, fpath): """See :py:mod:`niprov.importing` """ return niprov.importing.importp(fpath, self.deps) def inspect(self, location): """See :py:mod:`niprov.inspection` """ return niprov.inspection.inspect(location, dependencies=self.deps) def log(self, new, transformation, parents, code=None, logtext=None, transient=False, script=None, user=None, provenance=None, opts=None): """See :py:mod:`niprov.plogging` """ return niprov.plogging.log(new, transformation, parents, code, logtext, transient, script, user, provenance, opts, self.deps) def markForApproval(self, files): """See :py:mod:`niprov.approval` """ return niprov.approval.markForApproval(files, dependencies=self.deps) def markedForApproval(self): """See :py:mod:`niprov.approval` """ return niprov.approval.markedForApproval(dependencies=self.deps) def print_(self, images, pipeline=False): """See :py:mod:`niprov.exporting` """ return niprov.exporting.print_(images, pipeline, self.deps) def renameDicoms(self, dicomdir): """See :py:mod:`niprov.renaming` """ return niprov.renaming.renameDicoms(dicomdir, dependencies=self.deps) def record(self, command, new=None, parents=None, transient=False, args=None, kwargs=None, user=None, opts=None): """See :py:mod:`niprov.recording` """ return niprov.recording.record(command, new, parents, transient, args, kwargs, user, opts, self.deps) def search(self, text): """See :py:mod:`niprov.searching` """ return niprov.searching.search(text, dependencies=self.deps) def selectApproved(self, files): """See :py:mod:`niprov.approval` """ return niprov.approval.selectApproved(files, dependencies=self.deps) def view(self, images, pipeline=False): """See :py:mod:`niprov.exporting` """ return niprov.exporting.view(images, pipeline, self.deps)
def test_provides_Query(self): from niprov.dependencies import Dependencies from niprov.querying import Query dependencies = Dependencies() self.assertIsInstance(dependencies.getQuery(), Query)