def test_make_fasta_rec(self):
"""make_fasta_rec should return expected results."""
header = '>E2_1 FYI2DSB01B17QJ orig_bc=ATCACTAGTCAC new_bc=ATCACTAGTCAC bc_diffs=0'
seq = 'CTGGTC'
qual = map(int, '32 32 32 19 19 19'.split())
self.assertEqual(make_fastq_rec(header, seq, qual),
"""@E2_1 FYI2DSB01B17QJ orig_bc=ATCACTAGTCAC new_bc=ATCACTAGTCAC bc_diffs=0
CTGGTC
+E2_1 FYI2DSB01B17QJ orig_bc=ATCACTAGTCAC new_bc=ATCACTAGTCAC bc_diffs=0
AAA444""")
def test_make_fasta_rec(self):
"""make_fasta_rec should return expected results."""
header = '>E2_1 FYI2DSB01B17QJ orig_bc=ATCACTAGTCAC new_bc=ATCACTAGTCAC bc_diffs=0'
seq = 'CTGGTC'
qual = map(int, '32 32 32 19 19 19'.split())
self.assertEqual(
make_fastq_rec(header, seq, qual),
"""@E2_1 FYI2DSB01B17QJ orig_bc=ATCACTAGTCAC new_bc=ATCACTAGTCAC bc_diffs=0
CTGGTC
+E2_1 FYI2DSB01B17QJ orig_bc=ATCACTAGTCAC new_bc=ATCACTAGTCAC bc_diffs=0
AAA444""")