def test_accessRoot(self):
logger.info('== {} =='.format(self._testMethodName))
args = Args()
args.toPath = '/'
args.logfile = 'rts2-debug'
args.level = 'INFO'
args.toconsole = False
lg = Logger(debug=False, args=args)
# it is a weak assertion since Logger is not yet really unittestable (for developemnt purposes only)
self.assertIsInstance(
obj=lg,
cls=Logger,
msg='returned object: {} is not of type Logger'.format(type(lg)))
#!/usr/bin/python
from rts2saf.log import Logger
from rts2saf.rts2exec import Rts2Exec
from rts2.json import JSONProxy
class Args(object):
def __init__(self):
pass
args = Args()
args.toPath = '/var/log'
args.logfile = 'rts2-debug'
args.level = 'DEBUG'
debug = False
logger = Logger(debug=debug, args=args).logger
proxy = JSONProxy()
ex = Rts2Exec(debug=debug, proxy=proxy, logger=logger)
ex.reeanableEXEC()
logger.info('rts2saf_reenable_exec.py: reenabled EXEC')
#!/usr/bin/python
from rts2saf.log import Logger
from rts2saf.rts2exec import Rts2Exec
from rts2.json import JSONProxy
class Args(object):
def __init__(self):
pass
args=Args()
args.toPath='/var/log'
args.logfile= 'rts2-debug'
args.level='DEBUG'
debug=False
logger= Logger(debug=debug, args=args ).logger
proxy=JSONProxy()
ex= Rts2Exec(debug=debug, proxy=proxy, logger=logger)
ex.reeanableEXEC()
logger.info('rts2saf_reenable_exec.py: reenabled EXEC')
# used for test the whole process
# there is no environment, specify your absolute path
# if you need it
#args.dryFitsFiles='YOUR/HOME/rts-2/scripts/rts2saf/samples'
#
if args.verbose:
args.debug = True
args.level = 'DEBUG'
args.toconsole = True
if args.checkConfig:
args.toconsole = True
# logger
logger = Logger(
debug=args.debug,
args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt = Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error(
'rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'
.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error(
'rts2saf_focus: exiting, check the configuration file: {0}'.format(
args.config))
sys.exit(1)
# used for test the whole process
# there is no environment, specify your absolute path
# if you need it
#args.dryFitsFiles='YOUR/HOME/rts-2/scripts/rts2saf/samples'
#
if args.verbose:
args.debug=True
args.level='DEBUG'
args.toconsole=True
if args.checkConfig:
args.toconsole=True
# logger
logger= Logger(debug=args.debug, args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt=Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error('rts2saf_focus: exiting, check the configuration file: {0}'.format(args.config))
sys.exit(1)
# overwrite config defaults
rt.cfg['ANALYZE_FLUX'] = args.flux
rt.cfg['ANALYZE_ASSOC'] = args.associate
rt.cfg['ANALYZE_ASSOC_FRACTION'] = args.fractObjs
parser= argparse.ArgumentParser(prog=prg, description='rts2saf calculate fwhm')
parser.add_argument('--debug', dest='debug', action='store_true', default=False, help=': %(default)s,add more output')
parser.add_argument('--sxdebug', dest = 'sxDebug', action = 'store_true', default = False, help = ': %(default)s,add more output on SExtract')
parser.add_argument('--level', dest='level', default='INFO', help=': %(default)s, debug level')
parser.add_argument('--topath', dest='toPath', metavar='PATH', action='store', default='/var/log/', help=': %(default)s, write log file to path') # needs always to write somwhere
parser.add_argument('--logfile',dest='logfile', default='rts2-debug'.format(prg), help=': %(default)s, logfile name')
parser.add_argument('--toconsole', dest='toconsole', action='store_true', default=False, help=': %(default)s, log to console')
parser.add_argument('--config', dest='config', action='store', default='/usr/local/etc/rts2/rts2saf/rts2saf.cfg', help=': %(default)s, configuration file path')
parser.add_argument('--queue', dest='queue', action='store', default='focusing', help=': %(default)s, queue where to set a focus run')
parser.add_argument('--tarid', dest='tarId', action='store', default=5, help=': %(default)s, target id of OnTargetFocus')
parser.add_argument('--fwhmthreshold', dest='fwhmThreshold', action='store', type=float, default=None, help=': %(default)s, threshold to trigger a focus run')
parser.add_argument('--fitsFn', dest='fitsFn', action='store', default=None, help=': %(default)s, fits file to process')
parser.add_argument('--ds9display', dest='Ds9Display', action='store_true', default=False, help=': %(default)s, display fits images and region files')
args=parser.parse_args()
# logger
logger= Logger(debug=args.debug, args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt=Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error('rts2saf_focus: exiting, check the configuration file: {0}'.format(args.config))
sys.exit(1)
sex= Sextract(debug=args.debug, rt=rt, logger=logger)
if args.fitsFn==None:
logger.error('rts2af_fwhm: no --fitsFn specified, exiting'.format(args.fitsFn))
sys.exit(1)
from rts2saf.config import Configuration
from rts2saf.log import Logger
script=os.path.basename(__file__)
parser= argparse.ArgumentParser(prog=script, description='rts2asaf online image processing')
parser.add_argument('--debug', dest='debug', action='store_true', default=False, help=': %(default)s,add more output')
parser.add_argument('--level', dest='level', default='INFO', help=': %(default)s, debug level')
parser.add_argument('--topath', dest='toPath', metavar='PATH', action='store', default='/var/log', help=': %(default)s, write log file to path') # needs a path where it can always write
parser.add_argument('--logfile',dest='logfile', default='rts2-debug', help=': %(default)s, logfile name')
parser.add_argument('--toconsole', dest='toconsole', action='store_true', default=False, help=': %(default)s, log to console')
parser.add_argument('--config', dest='config', action='store', default='/usr/local/etc/rts2/rts2saf/rts2saf.cfg', help=': %(default)s, configuration file path')
parser.add_argument( metavar='FITS FN', dest='fitsFn', nargs=1, default=None, help=': %(default)s, FITS file name')
args=parser.parse_args()
logger= Logger(debug=args.debug, args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt=Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error('[0]: exiting, check the configuration file: {1}'.format(script, args.config))
sys.exit(1)
if not args.fitsFn:
parser.print_help()
logger.warn('{0}: no FITS file specified'.format(script))
sys.exit(1)
# ToDo parser.add_argument('--display-failures', dest = 'display_failures', action = 'store_true', default = False, help = ': %(default)s, display focus run where the fit failed')
parser.add_argument('--means',
dest='means',
action='store_true',
default=False,
help=': %(default)s, calculate weighted means')
args = parser.parse_args()
if args.debug:
args.level = 'DEBUG'
args.toconsole = True
# logger
logger = Logger(
debug=args.debug,
args=args).logger # if you need to chage the log format do it here
# hint to the user
if defaultCfg in args.config:
logger.info(
'rts2saf_focus: using default configuration file: {0}'.format(
args.config))
# config
rtc = Configuration(logger=logger)
if not rtc.readConfiguration(fileName=args.config):
logger.error(
'rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'
.format(args.config))
sys.exit(1)
help=': %(default)s, threshold to trigger a focus run')
parser.add_argument('--fitsFn',
dest='fitsFn',
action='store',
default=None,
help=': %(default)s, fits file to process')
parser.add_argument(
'--ds9display',
dest='Ds9Display',
action='store_true',
default=False,
help=': %(default)s, display fits images and region files')
args = parser.parse_args()
# logger
logger = Logger(
debug=args.debug,
args=args).logger # if you need to chage the log format do it here
# read the run time configuration
rt = Configuration(logger=logger)
if not rt.readConfiguration(fileName=args.config):
logger.error(
'rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'
.format(args.config))
sys.exit(1)
if not rt.checkConfiguration(args=args):
logger.error(
'rts2saf_focus: exiting, check the configuration file: {0}'.format(
args.config))
sys.exit(1)
parser.add_argument('--flux', dest = 'flux', action = 'store_true', default = False, help = ': %(default)s, do flux analysis')
parser.add_argument('--model', dest = 'model', action = 'store_true', default = False, help = ': %(default)s, fit temperature model')
parser.add_argument('--fraction', dest = 'fractObjs', action = 'store', default = 0.5, type = float, help = ': %(default)s, fraction of objects which must be present on each image, base: object number on reference image, this option is used only together with --associate')
parser.add_argument('--emptySlots', dest = 'emptySlots', action = 'store', default = None, type = str, nargs = '+', help = ': %(default)s, list of SPACE separated names of the empty slots')
parser.add_argument('--focuser-interval', dest = 'focuserInterval', action = 'store', default = list(), type = int, nargs = '+', help = ': %(default)s, focuser position interval, positions out side this interval will be ignored')
# ToDo parser.add_argument('--display-failures', dest = 'display_failures', action = 'store_true', default = False, help = ': %(default)s, display focus run where the fit failed')
parser.add_argument('--means', dest = 'means', action = 'store_true', default = False, help = ': %(default)s, calculate weighted means')
args = parser.parse_args()
if args.debug:
args.level = 'DEBUG'
args.toconsole = True
# logger
logger = Logger(debug = args.debug, args = args).logger # if you need to chage the log format do it here
# hint to the user
if defaultCfg in args.config:
logger.info('rts2saf_focus: using default configuration file: {0}'.format(args.config))
# config
rtc = Configuration(logger = logger)
if not rtc.readConfiguration(fileName=args.config):
logger.error('rts2saf_focus: exiting, wrong syntax, check the configuration file: {0}'.format(args.config))
sys.exit(1)
# overwrite config defaults
rtc.cfg['ANALYZE_FLUX'] = args.flux
rtc.cfg['ANALYZE_ASSOC'] = args.associate
rtc.cfg['ANALYZE_ASSOC_FRACTION'] = args.fractObjs
rtc.cfg['FOCUSER_INTERVAL'] = args.focuserInterval