def executePluginSynchronous(self, _edPlugin):
"""
This method is used to start executable plugins in pipeline synchronously.
"""
_edControlSlotSUCCESS = EDSlot()
_edControlSlotFAILURE = EDSlot()
map(_edControlSlotSUCCESS.connect, _edPlugin.getSlotSUCCESS().getListMethod())
map(_edControlSlotFAILURE.connect, _edPlugin.getSlotFAILURE().getListMethod())
_edPlugin.getSlotSUCCESS().emptyListMethod()
_edPlugin.getSlotFAILURE().emptyListMethod()
_edPlugin.executeSynchronous()
if (not _edPlugin.isFailure()):
EDVerbose.DEBUG("EDControlPlugin.executeSynchronous slotSUCCESS")
# Check that something doesn't go wrong in the success method!
try:
_edControlSlotSUCCESS.call(_edPlugin)
except Exception:
EDVerbose.DEBUG("EDControlPlugin.executeSynchronous: ERROR in slotSUCCESS!")
EDVerbose.writeErrorTrace()
_edPlugin.setFailure()
if (_edPlugin.isFailure()):
EDVerbose.DEBUG("EDControlPlugin.executeSynchronous slotFAILURE")
# Check that something doesn't go wrong in the success method!
try:
_edControlSlotFAILURE.call(_edPlugin)
except Exception:
EDVerbose.DEBUG("EDControlPlugin.executeSynchronous: ERROR in slotFAILURE!")
EDVerbose.writeErrorTrace()
def sendEmail(self, _strSubject, _strMessage):
"""Sends an email to the EDNA contact person (if configured)."""
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: Subject = %s" % _strSubject)
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: Message:")
EDVerbose.DEBUG(_strMessage)
if self.__strEDNAContactEmail == None:
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: No email address configured!")
elif not EDUtilsPath.getEdnaSite().startswith("ESRF"):
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: Not executed at the ESRF! EDNA_SITE=%s" % EDUtilsPath.getEdnaSite())
else:
try:
EDVerbose.DEBUG("Sending message to %s." % self.__strEDNAContactEmail)
EDVerbose.DEBUG("Message: %s" % _strMessage)
strMessage = """
EDNA_HOME = %s
EDNA_SITE = %s
PLUGIN_NAME = %s
working_dir = %s
%s
""" % (EDUtilsPath.getEdnaHome(), EDUtilsPath.getEdnaSite(), self.getPluginName(), self.getWorkingDirectory(), _strMessage)
strEmailMsg = ("From: %s\r\nTo: %s\r\nSubject: %s\r\n\r\n%s" % (self.__strEDNAEmailSender, \
self.__strEDNAContactEmail, \
_strSubject, strMessage))
server = smtplib.SMTP("localhost")
server.sendmail(self.__strEDNAEmailSender, self.__strEDNAContactEmail, strEmailMsg)
server.quit()
except:
EDVerbose.DEBUG("Error when sending email message!")
EDVerbose.writeErrorTrace()
def sendEmail(self, _strSubject, _strMessage):
"""Sends an email to the EDNA contact person (if configured)."""
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: Subject = %s" % _strSubject)
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: Message:")
EDVerbose.DEBUG(_strMessage)
if self.__strEDNAContactEmail == None:
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: No email address configured!")
elif not EDUtilsPath.getEdnaSite().startswith("ESRF"):
EDVerbose.DEBUG("EDPluginControlInterfaceToMXCuBEv1_2.sendEmail: Not executed at the ESRF! EDNA_SITE=%s" % EDUtilsPath.getEdnaSite())
else:
try:
EDVerbose.DEBUG("Sending message to %s." % self.__strEDNAContactEmail)
EDVerbose.DEBUG("Message: %s" % _strMessage)
strMessage = """
EDNA_HOME = %s
EDNA_SITE = %s
PLUGIN_NAME = %s
working_dir = %s
%s
""" % (EDUtilsPath.getEdnaHome(), EDUtilsPath.getEdnaSite(), self.getPluginName(), self.getWorkingDirectory(), _strMessage)
strEmailMsg = ("From: %s\r\nTo: %s\r\nSubject: %s\r\n\r\n%s" % (self.__strEDNAEmailSender, \
self.__strEDNAContactEmail, \
_strSubject, strMessage))
server = smtplib.SMTP("localhost")
server.sendmail(self.__strEDNAEmailSender, self.__strEDNAContactEmail, strEmailMsg)
server.quit()
except:
EDVerbose.DEBUG("Error when sending email message!")
EDVerbose.writeErrorTrace()
def processKernel(self):
"""
Executes the test case.
"""
EDVerbose.DEBUG("EDTestCase.processKernel")
EDVerbose.screen()
EDVerbose.unitTest(
"==================================================================="
)
if self.getTestSuiteName() is not None:
EDVerbose.unitTest("TEST SUITE : %s" % self.getTestSuiteName())
EDVerbose.unitTest("TEST CASE : %s" % self.getClassName())
EDVerbose.unitTest(" ")
if self.__strReasonForNotBeingExecuted == "":
self.setTimeInit()
iNumberMethods = self.getNumberOfTests()
EDVerbose.unitTest("Total number of tests : %d" % iNumberMethods)
EDVerbose.unitTest()
iTestCaseNumber = 0
if self.getListTest() == []:
self.__strReasonForNotBeingExecuted = "No test methods!"
else:
for pyTestMethod in self.getListTest():
iTestCaseNumber = iTestCaseNumber + 1
strMethodName = EDUtilsTest.patchMethodName(pyTestMethod)
EDVerbose.unitTest(
"-------------------------------------------------------------------"
)
EDVerbose.unitTest("Test case method : %s" % strMethodName)
EDVerbose.unitTest()
try:
pyTestMethod()
self.__iNumberTestMethodSuccess += 1
EDVerbose.unitTest("%s executed with SUCCESS" %
strMethodName)
EDVerbose.unitTest()
except AssertionError as pyException:
self.__dictMethodFailureMessages[strMethodName] = str(
pyException)
self.__iNumberTestMethodFailure += 1
EDVerbose.unitTest("Assertion Error Raised!")
EDVerbose.unitTest("%s executed with FAILURE" %
strMethodName)
EDVerbose.unitTest()
except Exception as pyException:
self.__dictMethodFailureMessages[strMethodName] = str(
pyException)
self.__iNumberTestMethodFailure += 1
EDVerbose.unitTest("Unexpected Error!")
EDVerbose.unitTest("%s executed with FAILURE" %
strMethodName)
EDVerbose.unitTest()
EDVerbose.writeErrorTrace()
EDVerbose.unitTest()
self.__bIsExecuted = True
self.setTimeEnd()
def processKernel(self):
"""
Executes the test case.
"""
EDVerbose.DEBUG("EDTestCase.processKernel")
EDVerbose.screen()
EDVerbose.unitTest("===================================================================")
if self.getTestSuiteName() is not None:
EDVerbose.unitTest("TEST SUITE : %s" % self.getTestSuiteName())
EDVerbose.unitTest("TEST CASE : %s" % self.getClassName())
EDVerbose.unitTest(" ")
if self.__strReasonForNotBeingExecuted == "":
self.setTimeInit()
iNumberMethods = self.getNumberOfTests()
EDVerbose.unitTest("Total number of tests : %d" % iNumberMethods)
EDVerbose.unitTest()
iTestCaseNumber = 0
if self.getListTest() == []:
self.__strReasonForNotBeingExecuted = "No test methods!"
else:
for pyTestMethod in self.getListTest():
iTestCaseNumber = iTestCaseNumber + 1
strMethodName = EDUtilsTest.patchMethodName(pyTestMethod)
EDVerbose.unitTest("-------------------------------------------------------------------")
EDVerbose.unitTest("Test case method : %s" % strMethodName)
EDVerbose.unitTest()
try:
pyTestMethod()
self.__iNumberTestMethodSuccess += 1
EDVerbose.unitTest("%s executed with SUCCESS" % strMethodName)
EDVerbose.unitTest()
except AssertionError, pyException:
self.__dictMethodFailureMessages[strMethodName] = str(pyException)
self.__iNumberTestMethodFailure += 1
EDVerbose.unitTest("Assertion Error Raised!")
EDVerbose.unitTest("%s executed with FAILURE" % strMethodName)
EDVerbose.unitTest()
except Exception, pyException:
self.__dictMethodFailureMessages[strMethodName] = str(pyException)
self.__iNumberTestMethodFailure += 1
EDVerbose.unitTest("Unexpected Error!")
EDVerbose.unitTest("%s executed with FAILURE" % strMethodName)
EDVerbose.unitTest()
EDVerbose.writeErrorTrace()
EDVerbose.unitTest()
self.__bIsExecuted = True
self.setTimeEnd()
def failurePluginExecution(self, _edObject=None):
"""
Method called when the execution of the plugin failed
"""
self.synchronizeOn()
self.__status = EDJob.PLUGIN_STATE_FAILURE
EDVerbose.screen("Plugin %s execution ended with failure" % self.__jobId)
self.synchronizeOff()
try:
self.__edSlotFAILURE.call(self.__jobId)
except Exception:
EDVerbose.ERROR("Error in execution of Failure call-back for %s" % self.__jobId)
EDVerbose.writeErrorTrace()
try:
self.__edSlotCallBack.call(self.__jobId)
except Exception:
EDVerbose.ERROR("Error in execution of Common call-back (after failure) for %s" % self.__jobId)
EDVerbose.writeErrorTrace()
def successPluginExecution(self, _edObject=None):
"""
Method called when the execution of the plugin succeeds
"""
self.synchronizeOn()
self.__status = EDJob.PLUGIN_STATE_SUCCESS
EDVerbose.screen("Plugin %s execution ended with success" % self.__jobId)
self.synchronizeOff()
try:
self.__edSlotSUCCESS.call(self.__jobId)
except Exception:
EDVerbose.ERROR("Error in execution of Success call-back for %s" % self.__jobId)
EDVerbose.writeErrorTrace()
try:
self.__edSlotCallBack.call(self.__jobId)
except Exception:
EDVerbose.ERROR("Error in execution of Common call-back (after success) for %s" % self.__jobId)
EDVerbose.writeErrorTrace()
def executePluginSynchronous(self, _edPlugin):
"""
This method is used to start executable plugins in pipeline synchronously.
"""
_edControlSlotSUCCESS = EDSlot()
_edControlSlotFAILURE = EDSlot()
map(_edControlSlotSUCCESS.connect,
_edPlugin.getSlotSUCCESS().getListMethod())
map(_edControlSlotFAILURE.connect,
_edPlugin.getSlotFAILURE().getListMethod())
_edPlugin.getSlotSUCCESS().emptyListMethod()
_edPlugin.getSlotFAILURE().emptyListMethod()
_edPlugin.executeSynchronous()
if (not _edPlugin.isFailure()):
EDVerbose.DEBUG("EDControlPlugin.executeSynchronous slotSUCCESS")
# Check that something doesn't go wrong in the success method!
try:
_edControlSlotSUCCESS.call(_edPlugin)
except Exception:
EDVerbose.DEBUG(
"EDControlPlugin.executeSynchronous: ERROR in slotSUCCESS!"
)
EDVerbose.writeErrorTrace()
_edPlugin.setFailure()
if (_edPlugin.isFailure()):
EDVerbose.DEBUG("EDControlPlugin.executeSynchronous slotFAILURE")
# Check that something doesn't go wrong in the success method!
try:
_edControlSlotFAILURE.call(_edPlugin)
except Exception:
EDVerbose.DEBUG(
"EDControlPlugin.executeSynchronous: ERROR in slotFAILURE!"
)
EDVerbose.writeErrorTrace()
def failurePluginExecution(self, _edObject=None):
"""
Method called when the execution of the plugin failed
"""
self.synchronizeOn()
self.__status = EDJob.PLUGIN_STATE_FAILURE
EDVerbose.screen("Plugin %s execution ended with failure" %
self.__jobId)
self.synchronizeOff()
try:
self.__edSlotFAILURE.call(self.__jobId)
except Exception:
EDVerbose.ERROR("Error in execution of Failure call-back for %s" %
self.__jobId)
EDVerbose.writeErrorTrace()
try:
self.__edSlotCallBack.call(self.__jobId)
except Exception:
EDVerbose.ERROR(
"Error in execution of Common call-back (after failure) for %s"
% self.__jobId)
EDVerbose.writeErrorTrace()
def successPluginExecution(self, _edObject=None):
"""
Method called when the execution of the plugin succeeds
"""
self.synchronizeOn()
self.__status = EDJob.PLUGIN_STATE_SUCCESS
EDVerbose.screen("Plugin %s execution ended with success" %
self.__jobId)
self.synchronizeOff()
try:
self.__edSlotSUCCESS.call(self.__jobId)
except Exception:
EDVerbose.ERROR("Error in execution of Success call-back for %s" %
self.__jobId)
EDVerbose.writeErrorTrace()
try:
self.__edSlotCallBack.call(self.__jobId)
except Exception:
EDVerbose.ERROR(
"Error in execution of Common call-back (after success) for %s"
% self.__jobId)
EDVerbose.writeErrorTrace()
from XSDataHDF5v1_0 import XSDataInputHDF5Writer
from EDFactoryPluginStatic import EDFactoryPluginStatic
architecture = EDUtilsPlatform.architecture
numpyPath = os.path.join(os.environ["EDNA_HOME"], "edna-libraries", "20090405-Numpy-1.3", architecture)
h5pyPath = os.path.join(os.environ["EDNA_HOME"], "edna-libraries", "H5Py-1.3.0", architecture)
fabioPath = os.path.join(os.environ["EDNA_HOME"], "edna-libraries", "FabIO-0.0.7", architecture)
imagingPath = os.path.join(os.environ["EDNA_HOME"], "edna-libraries", "20091115-PIL-1.1.7", architecture)
numpy = EDFactoryPluginStatic.preImport("numpy", numpyPath, _strMethodVersion="__version__")
h5py = EDFactoryPluginStatic.preImport("h5py", h5pyPath, _strMethodVersion="version.api_version", _strForceVersion="1.8")
Image = EDFactoryPluginStatic.preImport("Image", imagingPath, _strMethodVersion="VERSION")
fabio = EDFactoryPluginStatic.preImport("fabio", fabioPath, _strMethodVersion="version")
if h5py is None:
EDVerbose.error("h5py is None ... please investigate why !!!")
EDVerbose.writeErrorTrace()
# raise ImportError("EDPluginHDF5 cannot work without h5py !!!")
if "EDNA_SITE" not in os.environ:
os.environ["EDNA_SITE"] = "edna-site"
class EDPluginHDF5(EDPluginExec):
"""
This is a common part for all EDNA plugin writing HDF5. most methods are class methods
"""
__semCls = threading.Semaphore()
__dictHDF5 = {} #key: filename, value: hdf5 h5py objects
__dictLock = {} #key: filename, value:semaphores for writing
__bConfigured = False
numpyPath,
_strMethodVersion="__version__")
h5py = EDFactoryPluginStatic.preImport("h5py",
h5pyPath,
_strMethodVersion="version.api_version",
_strForceVersion="1.8")
Image = EDFactoryPluginStatic.preImport("Image",
imagingPath,
_strMethodVersion="VERSION")
fabio = EDFactoryPluginStatic.preImport("fabio",
fabioPath,
_strMethodVersion="version")
if h5py is None:
EDVerbose.error("h5py is None ... please investigate why !!!")
EDVerbose.writeErrorTrace()
# raise ImportError("EDPluginHDF5 cannot work without h5py !!!")
if "EDNA_SITE" not in os.environ:
os.environ["EDNA_SITE"] = "edna-site"
class EDPluginHDF5(EDPlugin):
"""
This is a common part for all EDNA plugin writing HDF5. most methods are class methods
"""
__semCls = Semaphore()
__dictHDF5 = {} #key: filename, value: hdf5 h5py objects
__dictLock = {} #key: filename, value:semaphores for writing
__bConfigured = False
HDF5_Multifiles = False
