def test_sequences2():
fasta = FastaFile("/home/kenglish/Data/uploads/EST_Clade_A.fasta")
sequences = fasta.get_sequences()
nose.tools.assert_equal( len(sequences ), 2163 )
nose.tools.assert_equal( sequences[0].id, "1420338:1")
nose.tools.assert_equal( len(sequences[0]) , 302 )
def test_sequence_count():
file = fastafile.PERMANENT_STORE + "EST_Clade_A_5.fasta"
fasta = FastaFile( file )
nose.tools.assert_equal(fasta.sequence_count(), 5)