Exemplos de logL_multiseq em Python

Exemplo n.º 1

Arquivo: estimate_example_ziphmm.py Projeto: tkchafin/coalhmm

def logLikelihood(model, all_obs, c, r, m, t):
    return logL_multiseq(model,
                         all_obs,
                         FIXED_COL_MAP,
                         c,
                         r,
                         m,
                         t,
                         prepare_matrices=zipHMM_prepare_matrices,
                         single_logL=zipHMM_single_logL)

Exemplo n.º 2

Arquivo: runCTMC.py Projeto: kaspermunch/SimulationPipeline

def logLikelihood(model, all_obs, c,r,m,t):
    return logL_multiseq(model, all_obs, COL_MAP, c,r,m,t,
            prepare_matrices=zipHMM_prepare_matrices,
            single_logL=zipHMM_single_logL)

Exemplo n.º 3

Arquivo: estimate_example_3species.py Projeto: tkchafin/coalhmm

def logLikelihood(model, all_obs, c, r, m, t):
    return logL_multiseq(model, all_obs, COL_MAP, c, r, m, t)

Exemplo n.º 4

Arquivo: estimate_example_3species.py Projeto: birc-aeh/coalhmm

def logLikelihood(model, all_obs, c,r,m,t):
    return logL_multiseq(model, all_obs, COL_MAP, c,r,m,t)

Exemplo n.º 5

Arquivo: estimate_example.py Projeto: birc-aeh/coalhmm

def logLikelihood(model, all_obs, c,r,m,t):
    # The simplest way to get a likelihood is to call logL_multiseq which will
    # assign actual times to your intervals, construct the matrices and run the
    # forward algorithm with the resulting matrices.
    return logL_multiseq(model, all_obs, FIXED_COL_MAP, c,r,m,t)

Exemplo n.º 6

Arquivo: estimate_example.py Projeto: tkchafin/coalhmm

def logLikelihood(model, all_obs, c, r, m, t):
    # The simplest way to get a likelihood is to call logL_multiseq which will
    # assign actual times to your intervals, construct the matrices and run the
    # forward algorithm with the resulting matrices.
    return logL_multiseq(model, all_obs, FIXED_COL_MAP, c, r, m, t)