def transfer_genome(provider,genotypeid,id,request):
'''Uploads genotype data for specified provider'''
source = provider
provider = check_cloud_provider(provider)
data = provider.get_genotype_data(request.headers['ACCESS-TOKEN'],genotypeid)
columns = data.columns.values.tolist()
data.sort([columns[1],columns[2]],inplace=True)
return genotype.get_genotype_infos(genotype.upload_genotype(data.to_csv(sep='\t',index=False,header=False),id,source))
def upload_genotype(body:getfile,id):
'''Upload a genotype'''
return genotype.get_genotype_infos(genotype.upload_genotype(body.decode("utf-8"),id))