def test_MotionOutliers_outputs():
    output_map = dict(out_file=dict(),
    out_metric_plot=dict(),
    out_metric_values=dict(),
    )
    outputs = MotionOutliers.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Exemplo n.º 2
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def test_MotionOutliers_outputs():
    output_map = dict(
        out_file=dict(),
        out_metric_plot=dict(),
        out_metric_values=dict(),
    )
    outputs = MotionOutliers.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Exemplo n.º 3
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def test_MotionOutliers_inputs():
    input_map = dict(
        args=dict(argstr='%s', ),
        dummy=dict(argstr='--dummy=%d', ),
        environ=dict(
            nohash=True,
            usedefault=True,
        ),
        ignore_exception=dict(
            nohash=True,
            usedefault=True,
        ),
        in_file=dict(
            argstr='-i %s',
            mandatory=True,
        ),
        mask=dict(argstr='-m %s', ),
        metric=dict(argstr='--%s', ),
        no_motion_correction=dict(argstr='--nomoco', ),
        out_file=dict(
            argstr='-o %s',
            hash_files=False,
            keep_extension=True,
            name_source='in_file',
            name_template='%s_outliers.txt',
        ),
        out_metric_plot=dict(
            argstr='-p %s',
            hash_files=False,
            keep_extension=True,
            name_source='in_file',
            name_template='%s_metrics.png',
        ),
        out_metric_values=dict(
            argstr='-s %s',
            hash_files=False,
            keep_extension=True,
            name_source='in_file',
            name_template='%s_metrics.txt',
        ),
        output_type=dict(),
        terminal_output=dict(nohash=True, ),
        threshold=dict(argstr='--thresh=%g', ),
    )
    inputs = MotionOutliers.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_MotionOutliers_inputs():
    input_map = dict(args=dict(argstr='%s',
    ),
    dummy=dict(argstr='--dummy=%d',
    ),
    environ=dict(nohash=True,
    usedefault=True,
    ),
    ignore_exception=dict(nohash=True,
    usedefault=True,
    ),
    in_file=dict(argstr='-i %s',
    mandatory=True,
    ),
    mask=dict(argstr='-m %s',
    ),
    metric=dict(argstr='--%s',
    ),
    no_motion_correction=dict(argstr='--nomoco',
    ),
    out_file=dict(argstr='-o %s',
    hash_files=False,
    keep_extension=True,
    name_source='in_file',
    name_template='%s_outliers.txt',
    ),
    out_metric_plot=dict(argstr='-p %s',
    hash_files=False,
    keep_extension=True,
    name_source='in_file',
    name_template='%s_metrics.png',
    ),
    out_metric_values=dict(argstr='-s %s',
    hash_files=False,
    keep_extension=True,
    name_source='in_file',
    name_template='%s_metrics.txt',
    ),
    output_type=dict(),
    terminal_output=dict(nohash=True,
    ),
    threshold=dict(argstr='--thresh=%g',
    ),
    )
    inputs = MotionOutliers.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value