def diff( file1path, file2path ): ''' find the diff of the benchmark for two dates and create a report''' seqlist1 = os.listdir(file1path) seqlist2 = os.listdir(file2path) diff_log = 'Diff between path:\n\t%s\n\t%s\n\n' % (file1path,file2path) # Find out the difference in seqence files seq_common = set(seqlist1) & set(seqlist2) diff_in_seqs_file = '' for i in set(seqlist1)-seq_common: diff_in_seqs_file = diff_in_seqs_file + '\t+' + i + '\n' for i in set(seqlist2)-seq_common: diff_in_seqs_file = diff_in_seqs_file + '\t-' + i + '\n' if diff_in_seqs_file == '': diff_in_seqs_file = '\tnone\n ' diff_log = diff_log + 'Difference in seqs files:\n' + diff_in_seqs_file + '\n' # Find the diff in the common seqfiles for seq in seq_common: if seq.endswith('.txt'): print "Diffing file: %s\n" %seq file1 = parse_seq.parse_seq( file1path + seq) file2 = parse_seq.parse_seq( file2path + seq) diff_counter, diff_message, diff_data = file1.diff(file2) if diff_counter: diff_log = diff_log + 'Mismatch in file: ' + seq +'\n\n' + diff_message +'\n\n' print diff_message f = open(file1path + 'diff.log', 'w') f.write(diff_log) f.close
def diff_file(filepath1,filepath2): print "Diffing file:\n\n\t%s\n\t%s \n" %(filepath1,filepath2) file1 = parse_seq.parse_seq( filepath1 ) file2 = parse_seq.parse_seq( filepath2 ) diff_counter, diff_message, diff_data = file1.diff(file2) print "Result:" print diff_message return diff_message
def plot_file(seq_file, digital=['odtttl','probe'], analog=['odtpow','bfield'],autorange=1,plot_range_min=0,plot_range_max=10000): seq = parse_seq(seq_file) data_digi_names = [] data_digi_time = [] data_digi = [] for chan,data in zip(seq.digi_channels,seq.digi_data): if chan in digital: data_digi_names.append(chan) data_digi_time.append(seq.digi_time) data_digi.append(data) data_analog_names = [] data_analog_time = [] data_analog = [] for channels,data,time in zip(seq.analog_channels,seq.analog_data,seq.analog_time): for chan,da in zip(channels,data): if chan in analog: data_analog_names.append(chan) data_analog_time.append(time) data_analog.append(da) fig = plt.figure() plot_seq(fig,data_digi_names,data_digi_time,data_digi,data_analog_names,data_analog_time,data_analog,autorange,plot_range_min,plot_range_max) fig.set_size_inches(16.0,10.0) fig.savefig(seq_file.split('.')[0]+'.png')
def _reload_fired(self): seq = parse_seq(self.file) self.waveforms[0].data = seq.digi_data self.waveforms[0].time = seq.digi_time for i, analog in enumerate(seq.analog_channels): self.waveforms[i + 1].data = seq.analog_data[i] self.waveforms[i + 1].time = seq.analog_time[i]
def _reload_fired(self): seq = parse_seq(self.file) self.waveforms[0].data = seq.digi_data self.waveforms[0].time = seq.digi_time for i, analog in enumerate(seq.analog_channels): self.waveforms[i+1].data = seq.analog_data[i] self.waveforms[i+1].time = seq.analog_time[i]
def _load_fired(self): seq = parse_seq(self.file) self.waveforms= [] self.waveforms.append( waveform( name= 'Digital', channels = seq.digi_channels, time = seq.digi_time, data = seq.digi_data)) for i, analog in enumerate(seq.analog_channels): self.waveforms.append( waveform( name= 'Analog%d' %i, channels = analog, time = seq.analog_time[i], data = seq.analog_data[i] ))
def _load_fired(self): seq = parse_seq(self.file) self.waveforms = [] self.waveforms.append( waveform(name='Digital', channels=seq.digi_channels, time=seq.digi_time, data=seq.digi_data)) for i, analog in enumerate(seq.analog_channels): self.waveforms.append( waveform(name='Analog%d' % i, channels=analog, time=seq.analog_time[i], data=seq.analog_data[i]))
def plot_file(seq_file, digital=['odtttl', 'probe'], analog=['odtpow', 'bfield'], autorange=1, plot_range_min=0, plot_range_max=10000): seq = parse_seq(seq_file) data_digi_names = [] data_digi_time = [] data_digi = [] for chan, data in zip(seq.digi_channels, seq.digi_data): if chan in digital: data_digi_names.append(chan) data_digi_time.append(seq.digi_time) data_digi.append(data) data_analog_names = [] data_analog_time = [] data_analog = [] for channels, data, time in zip(seq.analog_channels, seq.analog_data, seq.analog_time): for chan, da in zip(channels, data): if chan in analog: data_analog_names.append(chan) data_analog_time.append(time) data_analog.append(da) fig = plt.figure() plot_seq(fig, data_digi_names, data_digi_time, data_digi, data_analog_names, data_analog_time, data_analog, autorange, plot_range_min, plot_range_max) fig.set_size_inches(16.0, 10.0) fig.savefig(seq_file.split('.')[0] + '.png')