def create_language_paradigm(condition_defs):
ons = mpar.onsets_language_sess1
dur = mpar.durations_language_sess1
cnames = [c.name for c in condition_defs]
onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames]))
durations = OrderedDict(zip(cnames, [dur[c] for c in cnames]))
paradigm = mpar.Paradigm(onsets, stimDurations=durations)
return paradigm
def test_to_nipy_ER_2sess(self):
"""
Test event-related paradigm
"""
p = pdgm.Paradigm(self.onsets_2sess)
p_nipy = p.to_nipy_paradigm()
assert isinstance(p_nipy, EventRelatedParadigm)
def create_localizer_paradigm_a(condition_defs):
ons = mpar.onsets_loc_a
dur = paradigm.durations_loc_a
cnames = [c.name for c in condition_defs]
onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames]))
durations = OrderedDict(zip(cnames, [dur[c] for c in cnames]))
p = mpar.Paradigm(onsets, stimDurations=durations, sessionDurations=[300.])
return p
def test_to_nipy_Block_2sess(self):
"""
Test event-related paradigm
"""
p = pdgm.Paradigm(self.onsets_2sess,
stimDurations=self.durations_2sess)
p_nipy = p.to_nipy_paradigm()
assert isinstance(p_nipy, BlockParadigm)
def create_paradigm_un_evnt(condition_defs):
ons = mpar.onsets_un_evnt
cnames = [c.name for c in condition_defs]
onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames]))
paradigm = mpar.Paradigm(onsets)
return paradigm
def create_localizer_paradigm_avd(condition_defs):
ons = mpar.onsets_loc_av_d
cnames = [c.name for c in condition_defs]
onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames]))
par = mpar.Paradigm(onsets, sessionDurations=[300.])
return par
def create_localizer_paradigm(condition_defs, paradigm_label='av'):
ons = eval('paradigm.onsets_loc_%s' % paradigm_label)
cnames = [c.name for c in condition_defs]
onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames]))
par = mpar.Paradigm(onsets, sessionDurations=[300.])
return par
def test_to_spm_mat_1st_level(self):
p = pdgm.Paradigm(self.onsets_2sess,
stimDurations=self.durations_2sess)
p.save_spm_mat_for_1st_level_glm(
op.join(self.tmp_dir, 'conditions.mat'))
