def create_language_paradigm(condition_defs): ons = mpar.onsets_language_sess1 dur = mpar.durations_language_sess1 cnames = [c.name for c in condition_defs] onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames])) durations = OrderedDict(zip(cnames, [dur[c] for c in cnames])) paradigm = mpar.Paradigm(onsets, stimDurations=durations) return paradigm
def test_to_nipy_ER_2sess(self): """ Test event-related paradigm """ p = pdgm.Paradigm(self.onsets_2sess) p_nipy = p.to_nipy_paradigm() assert isinstance(p_nipy, EventRelatedParadigm)
def create_localizer_paradigm_a(condition_defs): ons = mpar.onsets_loc_a dur = paradigm.durations_loc_a cnames = [c.name for c in condition_defs] onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames])) durations = OrderedDict(zip(cnames, [dur[c] for c in cnames])) p = mpar.Paradigm(onsets, stimDurations=durations, sessionDurations=[300.]) return p
def test_to_nipy_Block_2sess(self): """ Test event-related paradigm """ p = pdgm.Paradigm(self.onsets_2sess, stimDurations=self.durations_2sess) p_nipy = p.to_nipy_paradigm() assert isinstance(p_nipy, BlockParadigm)
def create_paradigm_un_evnt(condition_defs): ons = mpar.onsets_un_evnt cnames = [c.name for c in condition_defs] onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames])) paradigm = mpar.Paradigm(onsets) return paradigm
def create_localizer_paradigm_avd(condition_defs): ons = mpar.onsets_loc_av_d cnames = [c.name for c in condition_defs] onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames])) par = mpar.Paradigm(onsets, sessionDurations=[300.]) return par
def create_localizer_paradigm(condition_defs, paradigm_label='av'): ons = eval('paradigm.onsets_loc_%s' % paradigm_label) cnames = [c.name for c in condition_defs] onsets = OrderedDict(zip(cnames, [ons[c] for c in cnames])) par = mpar.Paradigm(onsets, sessionDurations=[300.]) return par
def test_to_spm_mat_1st_level(self): p = pdgm.Paradigm(self.onsets_2sess, stimDurations=self.durations_2sess) p.save_spm_mat_for_1st_level_glm( op.join(self.tmp_dir, 'conditions.mat'))