Exemplos de _trim_all_sequences em Python

Exemplo n.º 1

 def test_trim_all_sequences_no_rev(self):
     obs = _trim_all_sequences(self.aligned_seqs, {"start": 7, "end": None})
     obs_seqs = {
         seq.metadata['id']: str(seq)
         for seq in obs.view(DNAIterator)
     }
     self.assertDictEqual(obs_seqs, self.exp_seqs_only_fwd)

Exemplo n.º 2

 def test_trim_all_sequences(self):
     obs = _trim_all_sequences(self.aligned_seqs, {"start": 7, "end": 104})
     obs_seqs = {
         seq.metadata['id']: str(seq)
         for seq in obs.view(DNAIterator)
     }
     self.assertDictEqual(obs_seqs, self.exp_seqs_both_primers)