def setup(pipe_config, supplied_mon_coords=None): """ Initialises the pipeline run. """ if not supplied_mon_coords: supplied_mon_coords = [] # Setup logfile before we do anything else log_dir = pipe_config.logging.log_dir setup_logging(log_dir, debug=pipe_config.logging.debug, use_colorlog=pipe_config.logging.colorlog) job_dir = pipe_config.DEFAULT.job_directory if not os.access(job_dir, os.X_OK): msg = "can't access job folder %s" % job_dir logger.error(msg) raise IOError(msg) logger.info("Job dir: %s", job_dir) db_config = get_database_config(pipe_config.database, apply=True) dump_database_backup(db_config, job_dir) job_config = load_job_config(pipe_config) dump_configs_to_logdir(log_dir, job_config, pipe_config) sync_rejectreasons(tkp.db.Database().Session()) job_config, dataset_id = initialise_dataset(job_config, supplied_mon_coords) return job_dir, job_config, dataset_id
def setup(pipe_config, supplied_mon_coords=None): """ Initialises the pipeline run. """ if not supplied_mon_coords: supplied_mon_coords = [] # Setup logfile before we do anything else log_dir = pipe_config.logging.log_dir setup_logging(log_dir, debug=pipe_config.logging.debug, use_colorlog=pipe_config.logging.colorlog) job_dir = pipe_config.DEFAULT.job_directory if not os.access(job_dir, os.X_OK): msg = "can't access job folder %s" % job_dir logger.error(msg) raise IOError(msg) logger.info("Job dir: %s", job_dir) db_config = get_database_config(pipe_config.database, apply=True) dump_database_backup(db_config, job_dir) job_config = load_job_config(pipe_config) dump_configs_to_logdir(log_dir, job_config, pipe_config) sync_rejectreasons(tkp.db.Database().Session()) job_config, dataset_id = initialise_dataset(job_config, supplied_mon_coords) return job_dir, job_config, dataset_id
def test_rejectreasons_sync(self): """ Delete a rejectreason, then re-sync and double check the counts match. """ reason = self.session.query(Rejectreason).all()[-1] print "Deleting reason id", reason.id self.session.delete(reason) self.assertNotEqual( self.session.query(Rejectreason).count(), len(dbqual.reject_reasons)) dbqual.sync_rejectreasons(self.session) self.session.flush() self.assertEqual( self.session.query(Rejectreason).count(), len(dbqual.reject_reasons))
def test_rejectreasons_sync(self): """ Delete a rejectreason, then re-sync and double check the counts match. """ reason = self.session.query(Rejectreason).all()[-1] print "Deleting reason id", reason.id self.session.delete(reason) self.assertNotEqual( self.session.query(Rejectreason).count(), len(dbqual.reject_reasons)) dbqual.sync_rejectreasons(self.session) self.session.flush() self.assertEqual( self.session.query(Rejectreason).count(), len(dbqual.reject_reasons))