def toggle_groupbox(self, button, *things):
"""This is intended to be part of the slot method for clicking on an open/close icon
of a dialog GroupBox. The arguments should be the button (whose icon will be altered here)
and the child widgets in the groupbox whose visibility should be toggled.
"""
if things:
if things[0].isVisible():
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand = False)
button.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
button.setPalette(palette)
button.setIcon(geticon("ui/actions/Properties Manager/GHOST_ICON"))
for thing in things:
thing.hide()
else:
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand = True)
button.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
button.setPalette(palette)
button.setIcon(geticon("ui/actions/Properties Manager/GHOST_ICON"))
for thing in things:
thing.show()
else:
print "Groupbox has no widgets. Clicking on groupbox button has no effect."
return
def _createActions(self, parentWidget):
self.exitProteinAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.exitProteinAction.setText("Exit Protein")
self.exitProteinAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitProteinAction.setCheckable(True)
self.buildPeptideAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.buildPeptideAction.setText("Peptide")
self.buildPeptideAction.setCheckable(True)
self.buildPeptideAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Peptide.png"))
self.editRotamersAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.editRotamersAction.setText("Rotamers")
self.editRotamersAction.setCheckable(True)
self.editRotamersAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Rotamer.png"))
self.editResiduesAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.editResiduesAction.setText("Residues")
self.editResiduesAction.setCheckable(True)
self.editResiduesAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Rotamer.png"))
self.displayProteinStyleAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.displayProteinStyleAction.setText("Edit Style")
self.displayProteinStyleAction.setCheckable(True)
self.displayProteinStyleAction.setIcon(
geticon("ui/actions/Edit/EditProteinDisplayStyle.png"))
def toggleExpandCollapse(self):
"""Slot method for the title button to expand/collapse the groupbox.
"""
if self.expanded: # Collapse groupbox by hiding ahe yellow TextEdit.
# The styleSheet contains the expand/collapse icon.
styleSheet = self.getTitleButtonStyleSheet(showExpanded = False)
self.titleButton.setStyleSheet(styleSheet)
# Why do we have to keep resetting the palette?
# Does assigning a new styleSheet reset the button's palette?
# If yes, we should add the button's color to the styleSheet.
# Mark 2007-05-20
self.titleButton.setPalette(self.getTitleButtonPalette())
self.titleButton.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
self.MessageTextEdit.hide()
self.expanded = False
else: # Expand groupbox by showing the yellow TextEdit.
# The styleSheet contains the expand/collapse icon.
styleSheet = self.getTitleButtonStyleSheet(showExpanded = True)
self.titleButton.setStyleSheet(styleSheet)
# Why do we have to keep resetting the palette?
# Does assigning a new styleSheet reset the button's palette?
# If yes, we should add the button's color to the styleSheet.
# Mark 2007-05-20
self.titleButton.setPalette(self.getTitleButtonPalette())
self.titleButton.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
self.MessageTextEdit.show()
self.expanded = True
def toggle_groupbox(self, button, *things):
"""This is intended to be part of the slot method for clicking on an open/close icon
of a dialog GroupBox. The arguments should be the button (whose icon will be altered here)
and the child widgets in the groupbox whose visibility should be toggled.
"""
if things:
if things[0].isVisible():
styleSheet = self.getGroupBoxButtonStyleSheet(
bool_expand=False)
button.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
button.setPalette(palette)
button.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
for thing in things:
thing.hide()
else:
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand=True)
button.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
button.setPalette(palette)
button.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
for thing in things:
thing.show()
else:
print "Groupbox has no widgets. Clicking on groupbox button has no effect."
return
def toggleExpandCollapse(self):
"""Slot method for the title button to expand/collapse the groupbox.
"""
if self.expanded: # Collapse groupbox by hiding ahe yellow TextEdit.
# The styleSheet contains the expand/collapse icon.
styleSheet = self.getTitleButtonStyleSheet(showExpanded=False)
self.titleButton.setStyleSheet(styleSheet)
# Why do we have to keep resetting the palette?
# Does assigning a new styleSheet reset the button's palette?
# If yes, we should add the button's color to the styleSheet.
# Mark 2007-05-20
self.titleButton.setPalette(self.getTitleButtonPalette())
self.titleButton.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
self.MessageTextEdit.hide()
self.expanded = False
else: # Expand groupbox by showing the yellow TextEdit.
# The styleSheet contains the expand/collapse icon.
styleSheet = self.getTitleButtonStyleSheet(showExpanded=True)
self.titleButton.setStyleSheet(styleSheet)
# Why do we have to keep resetting the palette?
# Does assigning a new styleSheet reset the button's palette?
# If yes, we should add the button's color to the styleSheet.
# Mark 2007-05-20
self.titleButton.setPalette(self.getTitleButtonPalette())
self.titleButton.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
self.MessageTextEdit.show()
self.expanded = True
def _createActions(self, parentWidget):
self.exitDnaAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.exitDnaAction.setText("Exit DNA")
self.exitDnaAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitDnaAction.setCheckable(True)
self.dnaDuplexAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.dnaDuplexAction.setText("Insert DNA")
self.dnaDuplexAction.setCheckable(True)
self.dnaDuplexAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertDsDna.png"))
self.breakStrandAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.breakStrandAction.setText("Break Strand")
self.breakStrandAction.setCheckable(True)
self.breakStrandAction.setIcon(
geticon("ui/actions/Command Toolbar/Break_Strand.png"))
self.joinStrandsAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.joinStrandsAction.setText("Join Strands")
self.joinStrandsAction.setCheckable(True)
self.joinStrandsAction.setIcon(
geticon("ui/actions/Command Toolbar/Join_Strands.png"))
self.makeCrossoversAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.makeCrossoversAction.setText("Crossovers")
self.makeCrossoversAction.setCheckable(True)
self.makeCrossoversAction.setIcon(
geticon("ui/actions/Command Toolbar/Crossover.png"))
self.dnaOrigamiAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.dnaOrigamiAction.setText("Origami")
self.dnaOrigamiAction.setIcon(
geticon("ui/actions/Tools/Build Structures/DNA_Origami.png"))
self.convertPAM3to5Action = NE1_QWidgetAction(parentWidget,
win=self.win)
self.convertPAM3to5Action.setText("PAM3 to PAM5")
self.convertPAM3to5Action.setIcon(
geticon("ui/actions/Command Toolbar/Convert3to5.png"))
self.convertPAM5to3Action = NE1_QWidgetAction(parentWidget,
win=self.win)
self.convertPAM5to3Action.setText("PAM5 to PAM3")
self.convertPAM5to3Action.setIcon(
geticon("ui/actions/Command Toolbar/Convert5to3.png"))
self.orderDnaAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.orderDnaAction.setText("Order DNA")
self.orderDnaAction.setIcon(
geticon("ui/actions/Command Toolbar/Order_DNA.png"))
self.editDnaDisplayStyleAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.editDnaDisplayStyleAction.setText("Edit Style")
self.editDnaDisplayStyleAction.setCheckable(True)
self.editDnaDisplayStyleAction.setIcon(
geticon("ui/actions/Edit/EditDnaDisplayStyle.png"))
def setupUi(self, orientationWidget):
win = self.win
MainWindow = self.win
# Set the default width and height.
_width = 150
_height = 280
_maxWidth = 400 # 400 should be more than enough. --mark
# "View > Orientation" Dock Widget
orientationWidget.setEnabled(True)
orientationWidget.setFloating(True)
orientationWidget.setVisible(False)
orientationWidget.setWindowTitle("Orientation" )
orientationWidget.setWindowIcon(
geticon("ui/actions/View/Modify/Orientation.png"))
orientationWidget.setGeometry(QRect(0, 0, _width, _height))
orientationWidget.setMaximumWidth(400)
x = max(0, win.geometry().x())
y = max(0, win.geometry().y())
orientationWidget.move(x, y)
self.orientationWindowContents = QtGui.QWidget(orientationWidget)
gridlayout = QtGui.QGridLayout(self.orientationWindowContents)
gridlayout.setMargin(4)
gridlayout.setSpacing(4)
hboxlayout = QtGui.QHBoxLayout()
hboxlayout.setMargin(0)
hboxlayout.setSpacing(6)
self.pinOrientationWindowToolButton = QtGui.QToolButton(self.orientationWindowContents)
self.pinOrientationWindowToolButton.setCheckable(True)
self.pinOrientationWindowToolButton.setIcon(
geticon("ui/dialogs/unpinned.png"))
hboxlayout.addWidget(self.pinOrientationWindowToolButton)
self.saveNamedViewToolButton = QtGui.QToolButton(self.orientationWindowContents)
self.saveNamedViewToolButton.setIcon(
geticon("ui/actions/View/Modify/Save_Named_View.png")) #@@ ninad 061115 dir path will be modified
hboxlayout.addWidget(self.saveNamedViewToolButton)
gridlayout.addLayout(hboxlayout, 0, 0, 1, 1)
self.orientationViewList = QtGui.QListWidget(orientationWidget)
self.orientationViewList.setFlow(QtGui.QListWidget.TopToBottom)
self.orientationViewList.setWindowIcon(
geticon("ui/actions/View/Modify/Orientation.png"))
gridlayout.addWidget(self.orientationViewList, 1, 0, 1, 1)
orientationWidget.setWidget(self.orientationWindowContents)
MainWindow.addDockWidget(Qt.BottomDockWidgetArea, orientationWidget)
def changePinIcon(self):
"""
Change the icon of the Pinned button
"""
if self.pinOrientationWindowToolButton.isChecked():
self.pinOrientationWindowToolButton.setIcon(
geticon("ui/dialogs/pinned.png"))
else:
self.pinOrientationWindowToolButton.setIcon(
geticon("ui/dialogs/unpinned.png"))
def changePinIcon(self):
"""
Change the icon of the Pinned button
"""
if self.pinOrientationWindowToolButton.isChecked():
self.pinOrientationWindowToolButton.setIcon(
geticon("ui/dialogs/pinned.png"))
else:
self.pinOrientationWindowToolButton.setIcon(
geticon("ui/dialogs/unpinned.png"))
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
"""
#@NOTE: In Build mode, some of the actions defined in this method are also
#used in Build Atoms PM. (e.g. bond actions) So probably better to rename
#it as _init_modeActions. Not doing that change in mmkit code cleanup
#commit(other modes still implement a method by same name)-ninad20070717
_superclass._createActions(self, parentWidget)
# The subControlActionGroup is the parent of all flyout QActions.
self.subControlActionGroup = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildAtomsPropertyManager.
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroup.setExclusive(True)
#Following Actions are added in the Flyout toolbar.
#Defining them outside that method as those are being used
#by the subclasses of deposit mode (testmode.py as of 070410) -- ninad
self.atomsToolAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.atomsToolAction.setText("Atoms Tool")
self.atomsToolAction.setIcon(geticon(
"ui/actions/Command Toolbar/BuildAtoms/AtomsTool.png"))
self.atomsToolAction.setCheckable(True)
self.atomsToolAction.setChecked(True)
self.atomsToolAction.setObjectName('ACTION_ATOMS_TOOL')
self.bondsToolAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.bondsToolAction.setText("Bonds Tool")
self.bondsToolAction.setIcon(geticon(
"ui/actions/Command Toolbar/BuildAtoms/BondsTool.png"))
self.bondsToolAction.setCheckable(True)
self.bondsToolAction.setObjectName('ACTION_BOND_TOOL')
self.subControlActionGroup.addAction(self.atomsToolAction)
self.subControlActionGroup.addAction(self.bondsToolAction)
self.transmuteAtomsAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.transmuteAtomsAction.setText("Transmute Atoms")
self.transmuteAtomsAction.setIcon(geticon(
"ui/actions/Command Toolbar/BuildAtoms/TransmuteAtoms.png"))
self.transmuteAtomsAction.setCheckable(False)
self._createBondToolActions(parentWidget)
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
"""
#@NOTE: In Build mode, some of the actions defined in this method are also
#used in Build Atoms PM. (e.g. bond actions) So probably better to rename
#it as _init_modeActions. Not doing that change in mmkit code cleanup
#commit(other modes still implement a method by same name)-ninad20070717
_superclass._createActions(self, parentWidget)
# The subControlActionGroup is the parent of all flyout QActions.
self.subControlActionGroup = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildAtomsPropertyManager.
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroup.setExclusive(True)
#Following Actions are added in the Flyout toolbar.
#Defining them outside that method as those are being used
#by the subclasses of deposit mode (testmode.py as of 070410) -- ninad
self.atomsToolAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.atomsToolAction.setText("Atoms Tool")
self.atomsToolAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/AtomsTool.png"))
self.atomsToolAction.setCheckable(True)
self.atomsToolAction.setChecked(True)
self.atomsToolAction.setObjectName('ACTION_ATOMS_TOOL')
self.bondsToolAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.bondsToolAction.setText("Bonds Tool")
self.bondsToolAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/BondsTool.png"))
self.bondsToolAction.setCheckable(True)
self.bondsToolAction.setObjectName('ACTION_BOND_TOOL')
self.subControlActionGroup.addAction(self.atomsToolAction)
self.subControlActionGroup.addAction(self.bondsToolAction)
self.transmuteAtomsAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.transmuteAtomsAction.setText("Transmute Atoms")
self.transmuteAtomsAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildAtoms/TransmuteAtoms.png"))
self.transmuteAtomsAction.setCheckable(False)
self._createBondToolActions(parentWidget)
def _createSimulateProteinsActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar, when the 'Simulate
Proteins' is active.
@see: self._createActions() where this is called.
"""
self.subControlActionGroupForSimulateProtein = QActionGroup(
parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroupForSimulateProtein.setExclusive(True)
self.rosetta_fixedbb_design_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_fixedbb_design_Action.setText("Fixed BB")
self.rosetta_fixedbb_design_Action.setCheckable(True)
self.rosetta_fixedbb_design_Action.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/FixedBackbone.png"))
self.rosetta_backrub_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_backrub_Action.setText("Backrub")
self.rosetta_backrub_Action.setCheckable(True)
self.rosetta_backrub_Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Backrub.png"))
self.editResiduesAction = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.editResiduesAction.setText("Residues")
self.editResiduesAction.setCheckable(True)
self.editResiduesAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Residues.png"))
self.rosetta_score_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_score_Action.setText("Score")
self.rosetta_score_Action.setCheckable(True)
self.rosetta_score_Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Score.png"))
self.subControlActionGroupForSimulateProtein.addAction(
self.rosetta_fixedbb_design_Action)
self.subControlActionGroupForSimulateProtein.addAction(
self.rosetta_backrub_Action)
self.subControlActionGroupForSimulateProtein.addAction(
self.editResiduesAction)
self.subControlActionGroupForSimulateProtein.addAction(
self.rosetta_score_Action)
return
def _createActions(self, parentWidget):
self.exitNanotubeAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.exitNanotubeAction.setText("Exit NT")
self.exitNanotubeAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitNanotubeAction.setCheckable(True)
self.insertNanotubeAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.insertNanotubeAction.setText("Insert NT")
self.insertNanotubeAction.setCheckable(True)
self.insertNanotubeAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertNanotube.png"))
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
"""
_superclass._createActions(self, parentWidget)
#Urmi 20080814: show this flyout toolbar only when rosetta plugin path
# is there
#Probably only rosetta_enabled_prefs_key check would have sufficed
plugin_name = "ROSETTA"
plugin_prefs_keys = (rosetta_enabled_prefs_key, rosetta_path_prefs_key)
errorcode, errortext_or_path = \
checkPluginPreferences(plugin_name, plugin_prefs_keys, ask_for_help = False)
#print "Error code =", errorcode, errortext_or_path
if errorcode == 0:
self.rosetta_enabled = True
else:
self.rosetta_enabled = False
# The subControlActionGroup is the parent of all flyout QActions.
self.subControlActionGroup = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroup.setExclusive(True)
self.modelProteinAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.modelProteinAction.setText("Model")
self.modelProteinAction.setIcon(geticon(
'ui/actions/Command Toolbar/BuildProtein/ModelProtein.png'))
self.modelProteinAction.setCheckable(True)
self.modelProteinAction.setChecked(True)
self.modelProteinAction.setObjectName('ACTION_MODEL_PROTEINS')
self.simulateProteinAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.simulateProteinAction.setText("Simulate")
self.simulateProteinAction.setIcon(geticon(
"ui/actions/Command Toolbar/BuildProtein/Simulate.png"))
self.simulateProteinAction.setCheckable(True)
self.simulateProteinAction.setObjectName('ACTION_SIMULATE_PROTEINS')
self.subControlActionGroup.addAction(self.modelProteinAction)
self.subControlActionGroup.addAction(self.simulateProteinAction)
self._createModelProteinsActions(parentWidget)
self._createSimulateProteinsActions(parentWidget)
def _createActions(self, parentWidget):
self.exitNanotubeAction = NE1_QWidgetAction(parentWidget,
win = self.win)
self.exitNanotubeAction.setText("Exit NT")
self.exitNanotubeAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitNanotubeAction.setCheckable(True)
self.insertNanotubeAction = NE1_QWidgetAction(parentWidget,
win = self.win)
self.insertNanotubeAction.setText("Insert NT")
self.insertNanotubeAction.setCheckable(True)
self.insertNanotubeAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertNanotube.png"))
def _loadBackgroundColorItems(self):
"""
Load the background color combobox with all the color options and sets
the current background color
"""
backgroundIndexes = [bg_BLUE_SKY, bg_EVENING_SKY, bg_SEAGREEN,
bg_BLACK, bg_WHITE, bg_GRAY, bg_CUSTOM]
backgroundNames = ["Blue Sky (default)", "Evening Sky", "Sea Green",
"Black", "White", "Gray", "Custom..."]
backgroundIcons = ["Background_BlueSky", "Background_EveningSky",
"Background_SeaGreen",
"Background_Black", "Background_White",
"Background_Gray", "Background_Custom"]
backgroundIconsDict = dict(zip(backgroundNames, backgroundIcons))
backgroundNamesDict = dict(zip(backgroundIndexes, backgroundNames))
for backgroundName in backgroundNames:
basename = backgroundIconsDict[backgroundName] + ".png"
iconPath = os.path.join("ui/dialogs/Preferences/",
basename)
self.backgroundColorComboBox.addItem(geticon(iconPath),
backgroundName)
self._updateBackgroundColorComboBoxIndex() # Not needed, but OK.
return
def grab_text_using_dialog(default="", title="title", label="label", iconPath="ui/border/MainWindow.png"):
"""
Get some text from the user by putting up a dialog with the
supplied title, label, and default text. Return (ok, text)
as described below.
Replace @@@ with \n in the returned text (and convert it to a Python
string). If it contains unicode characters, raise UnicodeEncodeError.
@return: the 2-tuple (ok, text), which is (True, text) if we succeed,
or (False, None) if the user cancels.
"""
# TODO: add an option to allow this to accept unicode,
# and do something better if that's not provided and unicode is entered
# (right now it just raises a UnicodeEncodeError).
# modified from _set_test_from_dialog( ),
# which was modified from debug_runpycode_from_a_dialog,
# which does the "run py code" debug menu command
# Qt4 version [070329; similar code in an exprs-module file]
inputDialog = QDialog() # No parent
inputDialog.setWindowIcon(geticon(iconPath))
text, ok = QInputDialog.getText(inputDialog, title, label, QLineEdit.Normal, default)
# note: parent arg is needed in Qt4, not in Qt3
if ok:
# fyi: type(text) == <class '__main__.qt.QString'>
text = str(text)
text = text.replace("@@@", "\n")
else:
pass # print "grab_text_using_dialog: cancelled"
return ok, text
def __init__(self, jig, glpane):
"""
Constructor for the class JigProp.
@param jig: the jig whose property dialog will be shown
@type jig: L{Jig}
@param glpane: GLPane object
@type glpane: L{GLPane}
"""
QDialog.__init__(self)
self.setupUi(self)
self.connect(self.cancel_btn, SIGNAL("clicked()"), self.reject)
self.connect(self.ok_btn, SIGNAL("clicked()"), self.accept)
self.connect(self.choose_color_btn,
SIGNAL("clicked()"),
self.change_jig_color)
# Set the dialog's border icon and caption based on the jig type.
jigtype_name = jig.__class__.__name__
# Fixes bug 1208. mark 060112.
self.setWindowIcon(geticon("ui/border/"+ jigtype_name))
self.setWindowTitle(jigtype_name + " Properties")
self.jig = jig
self.glpane = glpane
def showProgress(self, modal=True):
"""
Open the progress dialog to show the current job progress.
"""
#Replace "self.edit_cntl.win" with "None"
#---Huaicai 7/7/05: To fix bug 751, the "win" may be none.
#Feel awkward for the design of our code.
simProgressDialog = QProgressDialog()
simProgressDialog.setModal(True)
simProgressDialog.setObjectName("progressDialog")
simProgressDialog.setWindowIcon(geticon('ui/border/MainWindow'))
if self.Calculation == 'Energy':
simProgressDialog.setWindowTitle(
"Calculating Energy ...Please Wait")
else:
simProgressDialog.setWindowTitle("Optimizing ...Please Wait")
progBar = QProgressBar(simProgressDialog)
progBar.setMaximum(0)
progBar.setMinimum(0)
progBar.setValue(0)
progBar.setTextVisible(False)
simProgressDialog.setBar(progBar)
simProgressDialog.setAutoReset(False)
simProgressDialog.setAutoClose(False)
return simProgressDialog
def insertItems(self, row, items, setAsDefault = True):
"""
Insert the <items> specified items in this list widget.
The list widget shows item name string , as a QListwidgetItem.
This QListWidgetItem object defines a 'key' of a dictionary
(self._itemDictionary) and the 'value' of this key is the object
specified by the 'item' itself.
Example: self._itemDictionary['C6'] = instance of class Atom.
@param row: The row number for the item.
@type row: int
@param items: A list of objects. These objects are treated as values in
the self._itemDictionary
@type items: list
@param setAsDefault: Not used here. See PM_ListWidget.insertItems where
it is used.
@see: self.renameItemValue() for a comment about
self._suppress_itemChanged_signal
"""
#delete unused argument. Should this be provided as an argument in this
#class method ?
del setAsDefault
#self.__init__ for a comment about this flag
self._suppress_itemChanged_signal = True
#Clear the previous contents of the self._itemDictionary
self._itemDictionary.clear()
#Clear the contents of this list widget, using QListWidget.clear()
#See U{<http://doc.trolltech.com/4.2/qlistwidget.html>} for details
self.clear()
for item in items:
if hasattr(item.__class__, 'name'):
itemName = item.name
else:
itemName = str(item)
listWidgetItem = QListWidgetItem(itemName, self)
#When we support editing list widget items , uncomment out the
#following line . See also self.editItems -- Ninad 2008-01-16
listWidgetItem.setFlags( listWidgetItem.flags()| Qt.ItemIsEditable)
if hasattr(item.__class__, 'iconPath'):
try:
listWidgetItem.setIcon(geticon(item.iconPath))
except:
print_compact_traceback()
self._itemDictionary[listWidgetItem] = item
#Reset the flag that temporarily suppresses itemChange signal.
self._suppress_itemChanged_signal = False
def _createToolButton(self, widgetParams):
"""
Returns a tool button created using the custom parameters.
@param widgetParams: A list containing tool button parameters.
@type widgetParams: list
@see: L{self._createWidgetUsingParameters} where this method is called.
"""
buttonSize = QSize(32, 32) #@ FOR TEST ONLY
buttonParams = list(widgetParams)
buttonId = buttonParams[1]
buttonText = buttonParams[2]
buttonIconPath = buttonParams[3]
buttonToolTip = buttonParams[4]
buttonShortcut = buttonParams[5]
button = QToolButton(self)
button.setText(buttonText)
if buttonIconPath:
buttonIcon = geticon(buttonIconPath)
if not buttonIcon.isNull():
button.setIcon(buttonIcon)
button.setIconSize(QSize(22, 22))
button.setToolTip(buttonToolTip)
if buttonShortcut:
button.setShortcut(buttonShortcut)
button.setFixedSize(buttonSize) #@ Currently fixed to 32 x 32.
button.setCheckable(True)
return button
def _createToolButton(self, widgetParams):
"""
Returns a tool button created using the custom parameters.
@param widgetParams: A list containing tool button parameters.
@type widgetParams: list
@see: L{self._createWidgetUsingParameters} where this method is called.
"""
buttonSize = QSize(32, 32) #@ FOR TEST ONLY
buttonParams = list(widgetParams)
buttonId = buttonParams[1]
buttonText = buttonParams[2]
buttonIconPath = buttonParams[3]
buttonToolTip = buttonParams[4]
buttonShortcut = buttonParams[5]
button = QToolButton(self)
button.setText(buttonText)
if buttonIconPath:
buttonIcon = geticon(buttonIconPath)
if not buttonIcon.isNull():
button.setIcon(buttonIcon)
button.setIconSize(QSize(22, 22))
button.setToolTip(buttonToolTip)
if buttonShortcut:
button.setShortcut(buttonShortcut)
button.setFixedSize(buttonSize) #@ Currently fixed to 32 x 32.
button.setCheckable(True)
return button
def showProgress(self, modal = True):
"""
Open the progress dialog to show the current job progress.
"""
#Replace "self.edit_cntl.win" with "None"
#---Huaicai 7/7/05: To fix bug 751, the "win" may be none.
#Feel awkward for the design of our code.
simProgressDialog = QProgressDialog()
simProgressDialog.setModal(True)
simProgressDialog.setObjectName("progressDialog")
simProgressDialog.setWindowIcon(geticon('ui/border/MainWindow'))
if self.Calculation == 'Energy':
simProgressDialog.setWindowTitle("Calculating Energy ...Please Wait")
else:
simProgressDialog.setWindowTitle("Optimizing ...Please Wait")
progBar = QProgressBar(simProgressDialog)
progBar.setMaximum(0)
progBar.setMinimum(0)
progBar.setValue(0)
progBar.setTextVisible(False)
simProgressDialog.setBar(progBar)
simProgressDialog.setAutoReset(False)
simProgressDialog.setAutoClose(False)
return simProgressDialog
def getGroupBoxTitleButton(self,
name,
parent=None,
bool_expand=True): #Ninad 070206
""" Return the groupbox title pushbutton. The pushbutton is customized
such that it appears as a title bar to the user. If the user clicks on
this 'titlebar' it sends appropriate signals to open or close the
groupboxes 'name = string -- title of the groupbox
'bool_expand' = boolean .. NE1 uses a different background
image in the button's Style Sheet depending on the bool.
(i.e. if bool_expand = True it uses a opened group image '^')
See also: getGroupBoxTitleCheckBox , getGroupBoxButtonStyleSheet methods
"""
button = QtGui.QPushButton(name, parent)
button.setFlat(False)
button.setAutoFillBackground(True)
palette = self.getGroupBoxButtonPalette()
button.setPalette(palette)
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand)
button.setStyleSheet(styleSheet)
#ninad 070221 set a non existant 'Ghost Icon' for this button
#By setting such an icon, the button text left aligns!
#(which what we want :-) )
#So this might be a bug in Qt4.2. If we don't use the following kludge,
#there is no way to left align the push button text but to subclass it.
#(could mean a lot of work for such a minor thing) So OK for now
button.setIcon(geticon("ui/actions/Properties Manager/GHOST_ICON"))
return button
def insertItems(self, row, items, setAsDefault = True):
"""
Insert the <items> specified items in this list widget.
The list widget shows item name string , as a QListwidgetItem.
This QListWidgetItem object defines a 'key' of a dictionary
(self._itemDictionary) and the 'value' of this key is the object
specified by the 'item' itself.
Example: self._itemDictionary['C6'] = instance of class Atom.
@param row: The row number for the item.
@type row: int
@param items: A list of objects. These objects are treated as values in
the self._itemDictionary
@type items: list
@param setAsDefault: Not used here. See PM_ListWidget.insertItems where
it is used.
@see: self.renameItemValue() for a comment about
self._suppress_itemChanged_signal
"""
#delete unused argument. Should this be provided as an argument in this
#class method ?
del setAsDefault
#self.__init__ for a comment about this flag
self._suppress_itemChanged_signal = True
#Clear the previous contents of the self._itemDictionary
self._itemDictionary.clear()
#Clear the contents of this list widget, using QListWidget.clear()
#See U{<http://doc.trolltech.com/4.2/qlistwidget.html>} for details
self.clear()
for item in items:
if hasattr(item.__class__, 'name'):
itemName = item.name
else:
itemName = str(item)
listWidgetItem = QListWidgetItem(itemName, self)
#When we support editing list widget items , uncomment out the
#following line . See also self.editItems -- Ninad 2008-01-16
listWidgetItem.setFlags( listWidgetItem.flags()| Qt.ItemIsEditable)
if hasattr(item.__class__, 'iconPath'):
try:
listWidgetItem.setIcon(geticon(item.iconPath))
except:
print_compact_traceback()
self._itemDictionary[listWidgetItem] = item
#Reset the flag that temporarily suppresses itemChange signal.
self._suppress_itemChanged_signal = False
def getGroupBoxTitleButton(self, name, parent = None, bool_expand = True): #Ninad 070206
""" Return the groupbox title pushbutton. The pushbutton is customized
such that it appears as a title bar to the user. If the user clicks on
this 'titlebar' it sends appropriate signals to open or close the
groupboxes 'name = string -- title of the groupbox
'bool_expand' = boolean .. NE1 uses a different background
image in the button's Style Sheet depending on the bool.
(i.e. if bool_expand = True it uses a opened group image '^')
See also: getGroupBoxTitleCheckBox , getGroupBoxButtonStyleSheet methods
"""
button = QtGui.QPushButton(name, parent)
button.setFlat(False)
button.setAutoFillBackground(True)
palette = self.getGroupBoxButtonPalette()
button.setPalette(palette)
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand)
button.setStyleSheet(styleSheet)
#ninad 070221 set a non existant 'Ghost Icon' for this button
#By setting such an icon, the button text left aligns!
#(which what we want :-) )
#So this might be a bug in Qt4.2. If we don't use the following kludge,
#there is no way to left align the push button text but to subclass it.
#(could mean a lot of work for such a minor thing) So OK for now
button.setIcon(geticon("ui/actions/Properties Manager/GHOST_ICON"))
return button
def _createSimulateProteinsActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar, when the 'Simulate
Proteins' is active.
@see: self._createActions() where this is called.
"""
self.subControlActionGroupForSimulateProtein = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroupForSimulateProtein.setExclusive(True)
self.rosetta_fixedbb_design_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_fixedbb_design_Action.setText("Fixed BB")
self.rosetta_fixedbb_design_Action.setCheckable(True)
self.rosetta_fixedbb_design_Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/FixedBackbone.png"))
self.rosetta_backrub_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_backrub_Action.setText("Backrub")
self.rosetta_backrub_Action.setCheckable(True)
self.rosetta_backrub_Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Backrub.png"))
self.editResiduesAction = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.editResiduesAction.setText("Residues")
self.editResiduesAction.setCheckable(True)
self.editResiduesAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Residues.png"))
self.rosetta_score_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_score_Action.setText("Score")
self.rosetta_score_Action.setCheckable(True)
self.rosetta_score_Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Score.png"))
self.subControlActionGroupForSimulateProtein.addAction(self.rosetta_fixedbb_design_Action)
self.subControlActionGroupForSimulateProtein.addAction(self.rosetta_backrub_Action)
self.subControlActionGroupForSimulateProtein.addAction(self.editResiduesAction)
self.subControlActionGroupForSimulateProtein.addAction(self.rosetta_score_Action)
return
def _setExtensionButtonIcon(self):
"""
Sets the icon for the Flyout Toolbar extension button.
The PNG image can be 24 (or less) pixels high by 10 pixels wide.
"""
extension_button = self.getExtensionButton()
extension_button.setIcon(geticon(
"ui/actions/Command Toolbar/ExtensionButtonImage.png"))
def _setExtensionButtonIcon(self):
"""
Sets the icon for the Flyout Toolbar extension button.
The PNG image can be 24 (or less) pixels high by 10 pixels wide.
"""
extension_button = self.getExtensionButton()
extension_button.setIcon(
geticon("ui/actions/Command Toolbar/ExtensionButtonImage.png"))
def _createModelProteinsActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar, when the 'Model
Proteins' is active.
@see: self._createActions() where this is called.
"""
self.subControlActionGroupForModelProtein = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroupForModelProtein.setExclusive(True)
self.buildPeptideAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.buildPeptideAction.setText("Insert Peptide")
self.buildPeptideAction.setCheckable(True)
self.buildPeptideAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/InsertPeptide.png"))
self.compareProteinsAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.compareProteinsAction.setText("Compare")
self.compareProteinsAction.setCheckable(True)
self.compareProteinsAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Compare.png"))
self.displayProteinStyleAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.displayProteinStyleAction.setText("Edit Style")
self.displayProteinStyleAction.setCheckable(True)
self.displayProteinStyleAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/EditProteinDisplayStyle.png"
))
self.subControlActionGroupForModelProtein.addAction(
self.buildPeptideAction)
self.subControlActionGroupForModelProtein.addAction(
self.displayProteinStyleAction)
self.subControlActionGroupForModelProtein.addAction(
self.compareProteinsAction)
return
def __init__(self, win):
self.xmlfile = os.path.join(_sponsordir, 'sponsors.xml')
self.win = win
self.needToAsk = False
self.downloadSponsors = False
threading.Thread.__init__(self)
if not self.refreshWanted():
return
if env.prefs[sponsor_permanent_permission_prefs_key]:
# We have a permanent answer so no need for a dialog
if env.prefs[sponsor_download_permission_prefs_key]:
self.downloadSponsors = True
return
self.needToAsk = True
QDialog.__init__(self, None)
self.setObjectName("Permission")
self.setModal(True) #This fixes bug 2296. Mitigates bug 2297
layout = QGridLayout()
self.setLayout(layout)
layout.setMargin(0)
layout.setSpacing(0)
layout.setObjectName("PermissionLayout")
self.text_browser = QTextBrowser(self)
self.text_browser.setObjectName("text_browser")
layout.addWidget(self.text_browser, 0, 0, 1, 4)
self.text_browser.setMinimumSize(400, 80)
self.setWindowTitle('May we use your network connection?')
self.setWindowIcon(geticon('ui/border/MainWindow.png'))
self.text_browser.setPlainText(self.text)
self.accept_button = QPushButton(self)
self.accept_button.setObjectName("accept_button")
self.accept_button.setText("Always OK")
self.accept_once_button = QPushButton(self)
self.accept_once_button.setObjectName("accept_once_button")
self.accept_once_button.setText("OK now")
self.decline_once_button = QPushButton(self)
self.decline_once_button.setObjectName("decline_once_button")
self.decline_once_button.setText("Not now")
self.decline_always_button = QPushButton(self)
self.decline_always_button.setObjectName("decline_always_button")
self.decline_always_button.setText("Never")
layout.addWidget(self.accept_button, 1, 0)
layout.addWidget(self.accept_once_button, 1, 1)
layout.addWidget(self.decline_once_button, 1, 2)
layout.addWidget(self.decline_always_button, 1, 3)
self.connect(self.accept_button, SIGNAL("clicked()"),
self.acceptAlways)
self.connect(self.accept_once_button, SIGNAL("clicked()"),
self.acceptJustOnce)
self.connect(self.decline_once_button, SIGNAL("clicked()"),
self.declineJustOnce)
self.connect(self.decline_always_button, SIGNAL("clicked()"),
self.declineAlways)
def _createFlyoutActions(self):
self.exitEditCommandAction = NE1_QWidgetAction(self.win, win = self.win)
if self.editCommand:
text = "Exit " + self.editCommand.cmdname
else:
text = "Exit"
self.exitEditCommandAction.setText(text)
self.exitEditCommandAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitEditCommandAction.setCheckable(True)
def hideGroupBox(self, groupBoxButton, groupBoxWidget):
"""Hide a groupbox (this is not the same as 'toggle' groupbox)"""
groupBoxWidget.hide()
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand = False)
groupBoxButton.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
groupBoxButton.setPalette(palette)
groupBoxButton.setIcon(geticon("ui/actions/Properties Manager/GHOST_ICON"))
def _loadLayerPropertiesGroupBox(self, inPmGroupBox):
"""
Load widgets in the Layer Properties group box.
@param inPmGroupBox: The Layer Properties groupbox in the PM
@type inPmGroupBox: L{PM_GroupBox}
"""
self.currentLayerComboBox = \
PM_ComboBox( inPmGroupBox,
index = 0,
spanWidth = True
)
self.addLayerButton = PM_PushButton(inPmGroupBox)
self.addLayerButton.setIcon(
geticon('ui/actions/Properties Manager/addlayer.png'))
self.addLayerButton.setFixedSize(QSize(26, 26))
self.addLayerButton.setIconSize(QSize(22, 22))
# A widget list to create a widget row.
# Format:
# - Widget type,
# - widget object,
# - column
firstRowWidgetList = [('PM_ComboBox', self.currentLayerComboBox, 1),
('PM_PushButton', self.addLayerButton, 2)]
widgetRow = PM_WidgetRow(
inPmGroupBox,
title='',
widgetList=firstRowWidgetList,
label="Layer:",
labelColumn=0,
)
self.layerCellsSpinBox = \
PM_SpinBox( inPmGroupBox,
label = "Lattice cells:",
labelColumn = 0,
value = 2,
minimum = 1,
maximum = 25
)
self.layerThicknessLineEdit = PM_LineEdit(inPmGroupBox,
label="Thickness:",
text="",
setAsDefault=False,
spanWidth=False)
#self.layerThicknessLineEdit.setReadOnly(True)
self.layerThicknessLineEdit.setDisabled(True)
tooltip = "Thickness of layer in Angstroms"
self.layerThicknessLineEdit.setToolTip(tooltip)
def _loadLayerPropertiesGroupBox(self, inPmGroupBox):
"""
Load widgets in the Layer Properties group box.
@param inPmGroupBox: The Layer Properties groupbox in the PM
@type inPmGroupBox: L{PM_GroupBox}
"""
self.currentLayerComboBox = \
PM_ComboBox( inPmGroupBox,
index = 0,
spanWidth = True
)
self.addLayerButton = PM_PushButton(inPmGroupBox)
self.addLayerButton.setIcon(
geticon('ui/actions/Properties Manager/addlayer.png'))
self.addLayerButton.setFixedSize(QSize(26, 26))
self.addLayerButton.setIconSize(QSize(22, 22))
# A widget list to create a widget row.
# Format:
# - Widget type,
# - widget object,
# - column
firstRowWidgetList = [('PM_ComboBox', self.currentLayerComboBox, 1),
('PM_PushButton', self.addLayerButton, 2)
]
widgetRow = PM_WidgetRow(inPmGroupBox,
title = '',
widgetList = firstRowWidgetList,
label = "Layer:",
labelColumn = 0,
)
self.layerCellsSpinBox = \
PM_SpinBox( inPmGroupBox,
label = "Lattice cells:",
labelColumn = 0,
value = 2,
minimum = 1,
maximum = 25
)
self.layerThicknessLineEdit = PM_LineEdit(inPmGroupBox,
label = "Thickness:",
text = "",
setAsDefault = False,
spanWidth = False )
#self.layerThicknessLineEdit.setReadOnly(True)
self.layerThicknessLineEdit.setDisabled(True)
tooltip = "Thickness of layer in Angstroms"
self.layerThicknessLineEdit.setToolTip(tooltip)
def showGroupBox(self, groupBoxButton, groupBoxWidget):
"""Show a groupbox (this is not the same as 'toggle' groupbox)"""
if not groupBoxWidget.isVisible():
groupBoxWidget.show()
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand = True)
groupBoxButton.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
groupBoxButton.setPalette(palette)
groupBoxButton.setIcon(geticon("ui/actions/Properties Manager/GHOST_ICON"))
def hideGroupBox(self, groupBoxButton, groupBoxWidget):
"""Hide a groupbox (this is not the same as 'toggle' groupbox)"""
groupBoxWidget.hide()
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand=False)
groupBoxButton.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
groupBoxButton.setPalette(palette)
groupBoxButton.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
def __init__(self, parent=None):
"""
Constructor for Rosetta simulation parameters dialog
"""
self.parentWidget = parent
super(RosettaSimulationPopUpDialog, self).__init__(parent)
self.setWindowIcon(geticon('ui/border/Rosetta.png'))
self.setWindowTitle("Rosetta Simulation Parameters")
self._loadWidgets()
self.connectSignals()
self.show()
return
def __init__(self, parent = None):
"""
Constructor for Rosetta simulation parameters dialog
"""
self.parentWidget = parent
super(RosettaSimulationPopUpDialog, self).__init__(parent)
self.setWindowIcon(geticon('ui/border/Rosetta.png'))
self.setWindowTitle("Rosetta Simulation Parameters")
self._loadWidgets()
self.connectSignals()
self.show()
return
def __init__(self):
QWidget.__init__(self)
self.setupUi(self)
self.connect(self.help_tab, SIGNAL("currentChanged(int)"), self.setup_current_page)
self.connect(self.close_btn, SIGNAL("clicked()"), self.close)
self.setWindowIcon(geticon("ui/border/MainWindow.png"))
self._setup_mouse_controls_page()
self.help_tab.setCurrentIndex(0)
return
def showGroupBox(self, groupBoxButton, groupBoxWidget):
"""Show a groupbox (this is not the same as 'toggle' groupbox)"""
if not groupBoxWidget.isVisible():
groupBoxWidget.show()
styleSheet = self.getGroupBoxButtonStyleSheet(bool_expand=True)
groupBoxButton.setStyleSheet(styleSheet)
palette = self.getGroupBoxButtonPalette()
groupBoxButton.setPalette(palette)
groupBoxButton.setIcon(
geticon("ui/actions/Properties Manager/GHOST_ICON"))
def getFlyoutActionList(self): #Ninad 20070618
""" Returns a tuple that contains mode spcific actionlists in the
added in the flyout toolbar of the mode.
CommandToolbar._createFlyoutToolBar method calls this
@return: params: A tuple that contains 3 lists:
(subControlAreaActionList, commandActionLists, allActionsList)"""
#'allActionsList' returns all actions in the flyout toolbar
#including the subcontrolArea actions
allActionsList = []
#Action List for subcontrol Area buttons.
#In this mode, there is really no subcontrol area.
#We will treat subcontrol area same as 'command area'
#(subcontrol area buttons will have an empty list as their command area
#list). We will set the Comamnd Area palette background color to the
#subcontrol area.
subControlAreaActionList =[]
self.exitMoveAction = NE1_QWidgetAction(self.w,
win = self.w)
self.exitMoveAction.setText("Exit Move")
self.exitMoveAction.setWhatsThis("Exits Move Mode")
self.exitMoveAction.setCheckable(True)
self.exitMoveAction.setChecked(True)
self.exitMoveAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
subControlAreaActionList.append(self.exitMoveAction)
separator = QtGui.QAction(self.w)
separator.setSeparator(True)
subControlAreaActionList.append(separator)
subControlAreaActionList.append(self.w.toolsMoveMoleculeAction)
subControlAreaActionList.append(self.w.rotateComponentsAction)
subControlAreaActionList.append(self.w.modifyAlignCommonAxisAction)
allActionsList.extend(subControlAreaActionList)
#Empty actionlist for the 'Command Area'
commandActionLists = []
#Append empty 'lists' in 'commandActionLists equal to the
#number of actions in subControlArea
for i in range(len(subControlAreaActionList)):
lst = []
commandActionLists.append(lst)
params = (subControlAreaActionList, commandActionLists, allActionsList)
return params
def __init__(self, win):
self.xmlfile = os.path.join(_sponsordir, 'sponsors.xml')
self.win = win
self.needToAsk = False
self.downloadSponsors = False
threading.Thread.__init__(self)
if not self.refreshWanted():
return
if env.prefs[sponsor_permanent_permission_prefs_key]:
# We have a permanent answer so no need for a dialog
if env.prefs[sponsor_download_permission_prefs_key]:
self.downloadSponsors = True
return
self.needToAsk = True
QDialog.__init__(self, None)
self.setObjectName("Permission")
self.setModal(True) #This fixes bug 2296. Mitigates bug 2297
layout = QGridLayout()
self.setLayout(layout)
layout.setMargin(0)
layout.setSpacing(0)
layout.setObjectName("PermissionLayout")
self.text_browser = QTextBrowser(self)
self.text_browser.setObjectName("text_browser")
layout.addWidget(self.text_browser,0,0,1,4)
self.text_browser.setMinimumSize(400, 80)
self.setWindowTitle('May we use your network connection?')
self.setWindowIcon(geticon('ui/border/MainWindow.png'))
self.text_browser.setPlainText(self.text)
self.accept_button = QPushButton(self)
self.accept_button.setObjectName("accept_button")
self.accept_button.setText("Always OK")
self.accept_once_button = QPushButton(self)
self.accept_once_button.setObjectName("accept_once_button")
self.accept_once_button.setText("OK now")
self.decline_once_button = QPushButton(self)
self.decline_once_button.setObjectName("decline_once_button")
self.decline_once_button.setText("Not now")
self.decline_always_button = QPushButton(self)
self.decline_always_button.setObjectName("decline_always_button")
self.decline_always_button.setText("Never")
layout.addWidget(self.accept_button,1,0)
layout.addWidget(self.accept_once_button,1,1)
layout.addWidget(self.decline_once_button,1,2)
layout.addWidget(self.decline_always_button,1,3)
self.connect(self.accept_button,SIGNAL("clicked()"),self.acceptAlways)
self.connect(self.accept_once_button,SIGNAL("clicked()"),self.acceptJustOnce)
self.connect(self.decline_once_button,SIGNAL("clicked()"),self.declineJustOnce)
self.connect(self.decline_always_button,SIGNAL("clicked()"),self.declineAlways)
def _createModelProteinsActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar, when the 'Model
Proteins' is active.
@see: self._createActions() where this is called.
"""
self.subControlActionGroupForModelProtein = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroupForModelProtein.setExclusive(True)
self.buildPeptideAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.buildPeptideAction.setText("Insert Peptide")
self.buildPeptideAction.setCheckable(True)
self.buildPeptideAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/InsertPeptide.png"))
self.compareProteinsAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.compareProteinsAction.setText("Compare")
self.compareProteinsAction.setCheckable(True)
self.compareProteinsAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Compare.png"))
self.displayProteinStyleAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.displayProteinStyleAction.setText("Edit Style")
self.displayProteinStyleAction.setCheckable(True)
self.displayProteinStyleAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/EditProteinDisplayStyle.png"))
self.subControlActionGroupForModelProtein.addAction(self.buildPeptideAction)
self.subControlActionGroupForModelProtein.addAction(self.displayProteinStyleAction)
self.subControlActionGroupForModelProtein.addAction(self.compareProteinsAction)
return
def __init__(self):
QWidget.__init__(self)
self.setupUi(self)
self.connect(self.help_tab, SIGNAL("currentChanged(int)"),
self.setup_current_page)
self.connect(self.close_btn, SIGNAL("clicked()"), self.close)
self.setWindowIcon(geticon('ui/border/MainWindow.png'))
self._setup_mouse_controls_page()
self.help_tab.setCurrentIndex(0)
return
def getFlyoutActionList(self): #Ninad 20070618
""" Returns a tuple that contains mode spcific actionlists in the
added in the flyout toolbar of the mode.
CommandToolbar._createFlyoutToolBar method calls this
@return: params: A tuple that contains 3 lists:
(subControlAreaActionList, commandActionLists, allActionsList)"""
#'allActionsList' returns all actions in the flyout toolbar
#including the subcontrolArea actions
allActionsList = []
#Action List for subcontrol Area buttons.
#In this mode, there is really no subcontrol area.
#We will treat subcontrol area same as 'command area'
#(subcontrol area buttons will have an empty list as their command area
#list). We will set the Comamnd Area palette background color to the
#subcontrol area.
subControlAreaActionList = []
self.exitMoveAction = NE1_QWidgetAction(self.w, win=self.w)
self.exitMoveAction.setText("Exit Move")
self.exitMoveAction.setWhatsThis("Exits Move Mode")
self.exitMoveAction.setCheckable(True)
self.exitMoveAction.setChecked(True)
self.exitMoveAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
subControlAreaActionList.append(self.exitMoveAction)
separator = QtGui.QAction(self.w)
separator.setSeparator(True)
subControlAreaActionList.append(separator)
subControlAreaActionList.append(self.w.toolsMoveMoleculeAction)
subControlAreaActionList.append(self.w.rotateComponentsAction)
subControlAreaActionList.append(self.w.modifyAlignCommonAxisAction)
allActionsList.extend(subControlAreaActionList)
#Empty actionlist for the 'Command Area'
commandActionLists = []
#Append empty 'lists' in 'commandActionLists equal to the
#number of actions in subControlArea
for i in range(len(subControlAreaActionList)):
lst = []
commandActionLists.append(lst)
params = (subControlAreaActionList, commandActionLists, allActionsList)
return params
def _createBondToolActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar , when the 'bonds
tool' is active. Note that the object names of these action will be
be used to find the Bond Tool type to which each action corresponds to.
@see: self._createActions() where this is called.
"""
self.bondToolsActionGroup = QActionGroup(parentWidget)
self.bondToolsActionGroup.setExclusive(True)
self.bond1Action = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bond1Action.setText("Single")
self.bond1Action.setIcon(geticon("ui/actions/Command Toolbar/BuildAtoms/SingleBond.png"))
self.bond1Action.setObjectName('ACTION_SINGLE_BOND_TOOL')
self.bond2Action = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bond2Action.setText("Double")
self.bond2Action.setIcon(geticon("ui/actions/Command Toolbar/BuildAtoms/DoubleBond.png"))
self.bond2Action.setObjectName('ACTION_DOUBLE_BOND_TOOL')
self.bond3Action = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bond3Action.setText("Triple")
self.bond3Action.setIcon(geticon("ui/actions/Command Toolbar/BuildAtoms/TripleBond.png"))
self.bond3Action.setObjectName('ACTION_TRIPLE_BOND_TOOL')
self.bondaAction = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bondaAction.setText("Aromatic")
self.bondaAction.setIcon(geticon("ui/actions/Command Toolbar/BuildAtoms/AromaticBond.png"))
self.bondaAction.setObjectName('ACTION_AROMATIC_BOND_TOOL')
self.bondgAction = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bondgAction.setText("Graphitic")
self.bondgAction.setIcon(geticon("ui/actions/Command Toolbar/BuildAtoms/GraphiticBond.png"))
self.bondgAction.setObjectName('ACTION_GRAPHITIC_BOND_TOOL')
self.cutBondsAction = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.cutBondsAction.setText("Cut Bonds")
self.cutBondsAction.setIcon(geticon("ui/actions/Command Toolbar/BuildAtoms/CutBonds.png"))
self.cutBondsAction.setObjectName('ACTION_DELETE_BOND_TOOL')
for action in [self.bond1Action,
self.bond2Action,
self.bond3Action,
self.bondaAction,
self.bondgAction,
self.cutBondsAction
]:
self.bondToolsActionGroup.addAction(action)
action.setCheckable(True)
return
def getFlyoutActionList(self): #Ninad 20070618
"""
Returns custom actionlist that will be used in a specific mode
or editing a feature etc Example: while in movie mode,
the _createFlyoutToolBar method calls
this.
"""
#'allActionsList' returns all actions in the flyout toolbar
#including the subcontrolArea actions
allActionsList = []
#Action List for subcontrol Area buttons.
#In this mode there is really no subcontrol area.
#We will treat subcontrol area same as 'command area'
#(subcontrol area buttons will have an empty list as their command area
#list). We will set the Comamnd Area palette background color to the
#subcontrol area.
subControlAreaActionList = []
self.exitMovieAction = NE1_QWidgetAction(self.w, win=self.w)
self.exitMovieAction.setText("Exit Movie")
self.exitMovieAction.setWhatsThis("Exits Movie Mode")
self.exitMovieAction.setCheckable(True)
self.exitMovieAction.setChecked(True)
self.exitMovieAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
subControlAreaActionList.append(self.exitMovieAction)
separator = QAction(self.w)
separator.setSeparator(True)
subControlAreaActionList.append(separator)
subControlAreaActionList.append(self.w.simPlotToolAction)
allActionsList.extend(subControlAreaActionList)
#Empty actionlist for the 'Command Area'
commandActionLists = []
#Append empty 'lists' in 'commandActionLists equal to the
#number of actions in subControlArea
for i in range(len(subControlAreaActionList)):
lst = []
commandActionLists.append(lst)
params = (subControlAreaActionList, commandActionLists, allActionsList)
return params
def getFlyoutActionList(self): #Ninad 20070618
"""
Returns custom actionlist that will be used in a specific mode
or editing a feature etc Example: while in movie mode,
the _createFlyoutToolBar method calls
this.
"""
#'allActionsList' returns all actions in the flyout toolbar
#including the subcontrolArea actions
allActionsList = []
#Action List for subcontrol Area buttons.
#In this mode there is really no subcontrol area.
#We will treat subcontrol area same as 'command area'
#(subcontrol area buttons will have an empty list as their command area
#list). We will set the Comamnd Area palette background color to the
#subcontrol area.
subControlAreaActionList =[]
self.exitMovieAction = NE1_QWidgetAction(self.w, win = self.w)
self.exitMovieAction.setText("Exit Movie")
self.exitMovieAction.setWhatsThis("Exits Movie Mode")
self.exitMovieAction.setCheckable(True)
self.exitMovieAction.setChecked(True)
self.exitMovieAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
subControlAreaActionList.append(self.exitMovieAction)
separator = QAction(self.w)
separator.setSeparator(True)
subControlAreaActionList.append(separator)
subControlAreaActionList.append(self.w.simPlotToolAction)
allActionsList.extend(subControlAreaActionList)
#Empty actionlist for the 'Command Area'
commandActionLists = []
#Append empty 'lists' in 'commandActionLists equal to the
#number of actions in subControlArea
for i in range(len(subControlAreaActionList)):
lst = []
commandActionLists.append(lst)
params = (subControlAreaActionList, commandActionLists, allActionsList)
return params
def _createActions(self, parentWidget):
self.exitProteinAction = NE1_QWidgetAction(parentWidget,
win = self.win)
self.exitProteinAction.setText("Exit Protein")
self.exitProteinAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitProteinAction.setCheckable(True)
self.buildPeptideAction = NE1_QWidgetAction(parentWidget,
win = self.win)
self.buildPeptideAction.setText("Peptide")
self.buildPeptideAction.setCheckable(True)
self.buildPeptideAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Peptide.png"))
self.editRotamersAction = NE1_QWidgetAction(parentWidget, win = self.win)
self.editRotamersAction.setText("Rotamers")
self.editRotamersAction.setCheckable(True)
self.editRotamersAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Rotamer.png"))
self.editResiduesAction = NE1_QWidgetAction(parentWidget, win = self.win)
self.editResiduesAction.setText("Residues")
self.editResiduesAction.setCheckable(True)
self.editResiduesAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Rotamer.png"))
self.displayProteinStyleAction = NE1_QWidgetAction(parentWidget,
win = self.win)
self.displayProteinStyleAction.setText("Edit Style")
self.displayProteinStyleAction.setCheckable(True)
self.displayProteinStyleAction.setIcon(
geticon("ui/actions/Edit/EditProteinDisplayStyle.png"))
def _createActions(self, parentWidget):
_superclass._createActions(self, parentWidget)
self.subControlActionGroup = QtGui.QActionGroup(self.parentWidget)
self.subControlActionGroup.setExclusive(False)
self.insertNanotubeAction = \
NE1_QWidgetAction(self.subControlActionGroup,
win = self.win)
self.insertNanotubeAction.setText("Insert NT")
self.insertNanotubeAction.setCheckable(True)
self.insertNanotubeAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertNanotube.png"))
self.subControlActionGroup.addAction(self.insertNanotubeAction)
def _createActions(self, parentWidget):
_superclass._createActions(self, parentWidget)
self.subControlActionGroup = QtGui.QActionGroup(self.parentWidget)
self.subControlActionGroup.setExclusive(False)
self.insertNanotubeAction = \
NE1_QWidgetAction(self.subControlActionGroup,
win = self.win)
self.insertNanotubeAction.setText("Insert NT")
self.insertNanotubeAction.setCheckable(True)
self.insertNanotubeAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertNanotube.png"))
self.subControlActionGroup.addAction(self.insertNanotubeAction)
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
@see: self._getExitActionText() which defines text for exit action.
@note: subclasses typically extend this method to define more actions.
"""
#@NOTE: In Build mode, some of the actions defined in this method are also
#used in Build Atoms PM. (e.g. bond actions) So probably better to rename
#it as _init_modeActions. Not doing that change in mmkit code cleanup
#commit(other modes still implement a method by same name)-ninad20070717
self.exitModeAction = NE1_QWidgetAction(parentWidget, win = self.win)
exitActionText = self._getExitActionText()
self.exitModeAction.setText(exitActionText)
self.exitModeAction.setIcon(geticon('ui/actions/Command Toolbar/ControlArea/Exit.png'))
self.exitModeAction.setCheckable(True)
self.exitModeAction.setChecked(True)
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
@see: self._getExitActionText() which defines text for exit action.
@note: subclasses typically extend this method to define more actions.
"""
#@NOTE: In Build mode, some of the actions defined in this method are also
#used in Build Atoms PM. (e.g. bond actions) So probably better to rename
#it as _init_modeActions. Not doing that change in mmkit code cleanup
#commit(other modes still implement a method by same name)-ninad20070717
self.exitModeAction = NE1_QWidgetAction(parentWidget, win=self.win)
exitActionText = self._getExitActionText()
self.exitModeAction.setText(exitActionText)
self.exitModeAction.setIcon(
geticon('ui/actions/Command Toolbar/ControlArea/Exit.png'))
self.exitModeAction.setCheckable(True)
self.exitModeAction.setChecked(True)
def updatePropertyManagerTab(self, tab): #Ninad 061207
"Update the Properties Manager tab with 'tab' "
self.parent.glpane.gl_update_confcorner()
#bruce 070627, since PM affects confcorner appearance
if self.propertyManagerScrollArea.widget():
# The following is necessary to get rid of those C object
# deleted errors (and the resulting bugs)
lastwidgetobject = self.propertyManagerScrollArea.takeWidget()
if lastwidgetobject:
# bruce 071018 revised this code; see my comment on same
# code in PM_Dialog
try:
lastwidgetobject.update_props_if_needed_before_closing
except AttributeError:
if 1 or debug_flags.atom_debug:
msg1 = "Last PropMgr %r doesn't have method" % lastwidgetobject
msg2 =" update_props_if_needed_before_closing. That's"
msg3 = " OK (for now, only implemented for Plane PM). "
msg4 = "Ignoring Exception: "
print_compact_traceback(msg1 + msg2 + msg3 + msg4)
else:
lastwidgetobject.update_props_if_needed_before_closing()
lastwidgetobject.hide()
# @ ninad 061212 perhaps hiding the widget is not needed
self.pwProjectTabWidget.removeTab(
self.pwProjectTabWidget.indexOf(self.propertyManagerScrollArea))
# Set the PropertyManager tab scroll area to the appropriate widget.
self.propertyManagerScrollArea.setWidget(tab)
self.pwProjectTabWidget.addTab(
self.propertyManagerScrollArea,
geticon("ui/modeltree/Property_Manager.png"),
"")
self.pwProjectTabWidget.setCurrentIndex(
self.pwProjectTabWidget.indexOf(self.propertyManagerScrollArea))
return
def _setup(self, display_style = diDEFAULT, disconnect = True):
"""
Private method. Populates self and sets the current display style.
"""
from utilities.debug_prefs import debug_pref, Choice_boolean_False
# Add a new experimental Protein display style
# if the Enable proteins debug pref is set to True.
# piotr 080710
from utilities.GlobalPreferences import ENABLE_PROTEINS
if display_style == diDEFAULT:
display_style = env.prefs[ startupGlobalDisplayStyle_prefs_key ]
if disconnect:
self.disconnect( self,
SIGNAL("currentIndexChanged(int)"),
self._setDisplayStyle )
self.clear()
ADD_DEFAULT_TEXT = False
for displayName in displayNames:
# Experimental display style for Proteins.
if displayName == "Protein" and \
not ENABLE_PROTEINS:
# Skip the Proteins style.
continue
basename = displayIconsDict[displayName] + ".png"
iconPath = os.path.join("ui/actions/View/Display/",
basename)
self.addItem(geticon(iconPath), displayName)
self.setCurrentIndex(displayIndexes.index(display_style))
self.connect( self,
SIGNAL("currentIndexChanged(int)"),
self._setDisplayStyle )