def setHelper(self):
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
widget.attrs['class'] += " html5text"
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing HAWC assessment.<br><br>* required fields",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new assessment",
"help_text": u"""
Assessments are the fundamental objects in HAWC; all data added to the
tool will be related to an assessment. The settings below are used to
describe the basic characteristics of the assessment, along with setting
up permissions for role-based authorization and access for viewing and
editing content associated with an assessment.<br><br>* required fields""",
"cancel_url": reverse_lazy('portal')
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, "span6")
helper.add_fluid_row('version', 2, "span6")
helper.add_fluid_row('project_manager', 3, "span4")
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
'legend_text': 'Update {}'.format(self.instance),
'help_text': self.HELP_TEXT_UPDATE,
'cancel_url': self.instance.get_absolute_url()
}
else:
inputs = {
'legend_text': 'Create new experimental chemical',
'help_text': self.HELP_TEXT_CREATE,
'cancel_url': self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 3, 'span4')
helper.add_fluid_row('source', 3, 'span4')
helper.add_fluid_row('purity_confirmed_notes', 2, 'span6')
return helper
def setHelper(self):
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing visualization.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new visualization",
"help_text": u"""
Create a custom-visualization.
Generally, you will select a subset of available data on the
"Data" tab, then will customize the visualization using the
"Settings" tab. To view a preview of the visual at any time,
select the "Preview" tab.
""",
"cancel_url": self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
'legend_text': 'Update {}'.format(self.instance),
'help_text': self.HELP_TEXT_UPDATE,
'cancel_url': self.instance.get_absolute_url()
}
else:
inputs = {
'legend_text': 'Create new experiment',
'help_text': self.HELP_TEXT_CREATE,
'cancel_url': self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, 'span6')
helper.add_fluid_row('transfection', 2, 'span6')
helper.add_fluid_row('dosing_notes', 2, 'span6')
helper.add_fluid_row('has_positive_control', 2, 'span6')
helper.add_fluid_row('has_negative_control', 2, 'span6')
helper.add_fluid_row('has_vehicle_control', 2, 'span6')
helper.add_fluid_row('control_notes', 2, 'span6')
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {
"legend_text": "HAWC login"
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
helper.layout.append(
cfb.FormActions(
cfl.Submit('login', 'Login'),
cfl.HTML("""<a role="button" class="btn btn-default" href="{}">Cancel</a>""".format(reverse('home'))),
cfl.HTML("""<br><br>"""),
cfl.HTML("""<a href="{0}">Forgot your password?</a><br>""".format(reverse('user:reset_password'))),
cfl.HTML("""<a href="{0}">Create an account</a><br>""".format(reverse('user:new')))
)
)
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing data-pivot.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new data-pivot",
"help_text": """
Create a custom-visualization for this assessment.
Generally, you will select a subset of available data, then
customize the visualization the next-page.
""",
"cancel_url": self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "dataPivotForm"
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {"legend_text": "Create an account"}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
helper.layout.extend([
cfl.HTML(
'''<a class="btn btn-small" href="#license_modal" data-toggle="modal">View License</a>'''
),
cfb.FormActions(
cfl.Submit('login', 'Create account'),
cfl.HTML(
"""<a role="button" class="btn btn-default" href="{}">Cancel</a>"""
.format(reverse('user:login'))),
)
])
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) not in [forms.CheckboxInput, forms.CheckboxSelectMultiple]:
widget.attrs['class'] = 'span12'
helper = BaseFormHelper(self)
helper.form_method = "GET"
helper.form_class = None
helper.add_fluid_row('studies', 4, "span3")
helper.add_fluid_row('species', 4, "span3")
helper.add_fluid_row('name', 4, "span3")
helper.add_fluid_row('tags', 4, "span3")
helper.layout.append(
cfb.FormActions(
cfl.Submit('submit', 'Apply filters'),
)
)
return helper
def setHelper(self):
self.fields['description'].widget.attrs['rows'] = 4
for fld in list(self.fields.keys()):
self.fields[fld].widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update dosing regime",
"help_text": "Update an existing dosing-regime.",
"cancel_url": self.instance.dosed_animals.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new dosing-regime",
"help_text": """
Create a new dosing-regime. Each dosing-regime is one
protocol for how animals were dosed. Multiple different
dose-metrics can be associated with one dosing regime. If
this is a generational-experiment, you may not need to create
a new dosing-regime, but could instead specify the dosing
regime of parents or other ancestors.""",
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "dosing_regime"
helper.add_fluid_row('route_of_exposure', 3, "span4")
helper.add_fluid_row('num_dose_groups', 3, "span4")
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {"legend_text": "HAWC login"}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
helper.layout.append(
cfb.FormActions(
cfl.Submit('login', 'Login'),
cfl.HTML(
"""<a role="button" class="btn btn-default" href="{}">Cancel</a>"""
.format(reverse('home'))), cfl.HTML("""<br><br>"""),
cfl.HTML(
"""<a href="{0}">Forgot your password?</a><br>""".format(
reverse('user:reset_password'))),
cfl.HTML("""<a href="{0}">Create an account</a><br>""".format(
reverse('user:new')))))
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
widget.attrs['class'] += " html5text"
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text":
u"Update an existing HAWC assessment.<br><br>* required fields",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new assessment",
"help_text": u"""
Assessments are the fundamental objects in HAWC; all data added to the
tool will be related to an assessment. The settings below are used to
describe the basic characteristics of the assessment, along with setting
up permissions for role-based authorization and access for viewing and
editing content associated with an assessment.<br><br>* required fields""",
"cancel_url": reverse_lazy('portal')
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, "span6")
helper.add_fluid_row('version', 2, "span6")
helper.add_fluid_row('project_manager', 3, "span4")
return helper
def setHelper(self):
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
if self.instance.outcome:
url = self.instance.outcome.get_absolute_url()
else:
url = self.instance.study_population.get_absolute_url()
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": self.HELP_TEXT_UPDATE,
"cancel_url": url
}
else:
inputs = {
"legend_text": u"Create new comparison set",
"help_text": self.HELP_TEXT_CREATE,
"cancel_url": self.parent.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
if self.instance.outcome:
url = self.instance.outcome.get_absolute_url()
else:
url = self.instance.study_population.get_absolute_url()
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": self.HELP_TEXT_UPDATE,
"cancel_url": url
}
else:
inputs = {
"legend_text": "Create new comparison set",
"cancel_url": self.parent.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
'legend_text': 'Update {}'.format(self.instance),
'help_text': self.HELP_TEXT_UPDATE,
'cancel_url': self.instance.get_absolute_url()
}
else:
inputs = {
'legend_text': 'Create new experimental chemical',
'help_text': self.HELP_TEXT_CREATE,
'cancel_url': self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 3, 'span4')
helper.add_fluid_row('source', 3, 'span4')
helper.add_fluid_row('purity_confirmed_notes', 2, 'span6')
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {
"legend_text": "Password reset",
"help_text": "Enter a new password for your account."
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
helper.layout.append(
cfb.FormActions(
cfl.Submit('submit', 'Change password'),
cfl.HTML(
"""<a role="button" class="btn btn-default" href="{}">Cancel</a>"""
.format(reverse('user:login'))),
))
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
'legend_text': 'Update {}'.format(self.instance),
'help_text': self.HELP_TEXT_UPDATE,
'cancel_url': self.instance.get_absolute_url()
}
else:
inputs = {
'legend_text': 'Create new experiment',
'help_text': self.HELP_TEXT_CREATE,
'cancel_url': self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, 'span6')
helper.add_fluid_row('transfection', 2, 'span6')
helper.add_fluid_row('dosing_notes', 2, 'span6')
helper.add_fluid_row('has_positive_control', 2, 'span6')
helper.add_fluid_row('has_negative_control', 2, 'span6')
helper.add_fluid_row('has_vehicle_control', 2, 'span6')
helper.add_fluid_row('control_notes', 2, 'span6')
return helper
def setHelper(self):
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing data-pivot.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new data-pivot",
"help_text": u"""
Create a custom-visualization for this assessment.
Generally, you will select a subset of available data, then
customize the visualization the next-page.
""",
"cancel_url": self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing visualization.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new visualization",
"help_text": """
Create a custom-visualization.
Generally, you will select a subset of available data on the
"Data" tab, then will customize the visualization using the
"Settings" tab. To view a preview of the visual at any time,
select the "Preview" tab.
""",
"cancel_url": self.instance.get_list_url(self.instance.assessment.id)
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "visualForm"
return helper
def setHelper(self):
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
'legend_text': u'Update {}'.format(self.instance),
'help_text': self.HELP_TEXT_UPDATE,
'cancel_url': self.instance.get_absolute_url()
}
else:
inputs = {
'legend_text': u'Create new cell type',
'help_text': self.HELP_TEXT_CREATE,
'cancel_url': self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('species', 3, 'span4')
helper.add_fluid_row('cell_type', 2, 'span6')
helper.add_fluid_row('tissue', 2, 'span6')
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {
"legend_text": "Password reset",
"help_text": """
Enter your email address below, and we'll email instructions
for setting a new password.
"""
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
helper.layout.append(
cfb.FormActions(
cfl.Submit('submit', 'Send email confirmation'),
cfl.HTML("""<a role="button" class="btn btn-default" href="{}">Cancel</a>""".format(reverse('user:login')))
)
)
return helper
def setHelper(self):
inputs = {
'cancel_url': self.instance.rob_settings.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new endpoint",
"help_text": """
Create a new endpoint. An endpoint should describe
one measure-of-effect which was measured in the study.
It may or may not contain quantitative data. For
endpoint terminology, use the reference document
"<a href="https://hawcprd.epa.gov/assessment/100000039/">Recommended
Terminology for Outcomes/Endpoints</a>."
""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ["effects"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 4, "span3")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('observation_time', 3, "span4")
helper.add_fluid_row('data_reported', 3, "span4")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('response_units', 3, "span4")
helper.add_fluid_row('NOEL', 4, "span3")
helper.add_fluid_row('statistical_test', 3,
["span6", "span3", "span3"])
helper.add_fluid_row('litter_effects', 2, "span6")
url = reverse('assessment:effect_tag_create',
kwargs={'pk': self.instance.assessment.pk})
helper.addBtnLayout(helper.layout[4], 0, url, "Add new effect tag",
"span6")
return helper
def setHelper(self):
inputs = {
'legend_text': u'Copy risk of bias approach from existing assessments', # noqa
'help_text': u'Copy risk of bias metrics and domains from an existing HAWC assessment which you have access to.', # noqa
'cancel_url': reverse(
'riskofbias:arob_detail', args=[self.assessment.id])
}
helper = BaseFormHelper(self, **inputs)
helper.layout.insert(3, cfl.Div(css_id='extra_content_insertion'))
helper.form_class = None
return helper
def setHelper(self):
inputs = {
'legend_text':
'Copy study evaluation approach from existing assessments', # noqa
'help_text':
'Copy study evaluation metrics and domains from an existing HAWC assessment which you have access to.', # noqa
'cancel_url':
reverse('riskofbias:arob_detail', args=[self.assessment.id])
}
helper = BaseFormHelper(self, **inputs)
helper.layout.insert(3, cfl.Div(css_id='extra_content_insertion'))
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in self.ADJUSTMENT_FIELDS or fld == "resulttags":
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": self.HELP_TEXT_UPDATE,
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new set of results",
"help_text": self.HELP_TEXT_CREATE,
"cancel_url": self.instance.outcome.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, "span6")
helper.add_fluid_row('metric', 3, "span4")
helper.add_fluid_row('data_location', 2, "span6")
helper.add_fluid_row('dose_response', 3, "span4")
helper.add_fluid_row('statistical_power', 4, "span3")
helper.add_fluid_row('factors_applied', 2, "span6")
helper.add_fluid_row('estimate_type', 3, "span4")
helper.add_fluid_row("resulttags", 1, "span6")
url = reverse('assessment:effect_tag_create',
kwargs={'pk': self.instance.outcome.assessment_id})
helper.addBtnLayout(helper.layout[8], 0, url, "Add new result tag",
"span6")
url = reverse('epi:adjustmentfactor_create',
kwargs={'pk': self.instance.outcome.assessment_id})
# remove magic number 9; breaks if we change number of elements in the form. This still isn't great; what if comments went away?
btn_target_idx = helper.find_layout_idx_for_field_name('comments') - 1
helper.addBtnLayout(helper.layout[btn_target_idx], 0, url,
"Add new adjustment factor", "span6")
helper.addBtnLayout(helper.layout[btn_target_idx], 1, url,
"Add new adjustment factor", "span6")
return helper
def setHelper(self):
for fld in [
"inclusion_criteria", "exclusion_criteria",
"confounding_criteria"
]:
self.fields[fld].widget.update_query_parameters(
{'related': self.instance.study.assessment_id})
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in [
'inclusion_criteria', 'exclusion_criteria',
'confounding_criteria'
]:
widget.attrs['class'] = 'span11'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing study-population.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new study-population",
"help_text": u"""
Create a new study population. Each study-population is a
associated with an epidemiology study. There may be
multiple study populations with a single study,
though this is typically unlikely.""",
"cancel_url": self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, "span6")
helper.add_fluid_row('country', 3, "span4")
helper.add_fluid_row('sex', 4, "span3")
helper.add_fluid_row('n', 2, "span6")
helper.add_fluid_row('age_mean', 3, "span4")
helper.add_fluid_row('age_description', 3, "span4")
helper.add_fluid_row('age_lower', 4, "span3")
url = '{% url "epi:studycriteria_create" assessment.pk %}'
helper.add_adder("addIncCriteria", "Add new criteria", url)
helper.add_adder("addExcCriteria", "Add new criteria", url)
helper.add_adder("addConCriteria", "Add new criteria", url)
return helper
def setHelper(self, assessment):
self.fields['studies'].widget.attrs['size'] = 15
for fld in list(self.fields.keys()):
self.fields[fld].widget.attrs['class'] = 'span12'
inputs = {
"legend_text": "Copy studies across assessments",
"help_text": self.HELP_TEXT,
"cancel_url": reverse("study:list", args=[assessment.id]),
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self, assessment):
self.fields['studies'].widget.attrs['size'] = 15
for fld in list(self.fields.keys()):
self.fields[fld].widget.attrs['class'] = 'span12'
inputs = {
"legend_text": "Copy studies across assessments",
"help_text": self.HELP_TEXT,
"cancel_url": reverse("study:list", args=[assessment.id]),
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
self.fields['study'].widget.attrs["class"] += " studySearch"
helper = BaseFormHelper(self)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if fld in ["species", "strain"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing animal-group.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new animal-group",
"help_text": """
Create a new animal-group. Each animal-group is a set of
animals which are comparable for a given experiment. For
example, they may be a group of F1 rats. Animal-groups may
have different exposures or doses, but should be otherwise
comparable.""",
"cancel_url": self.instance.experiment.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "animal_group"
helper.add_fluid_row('species', 3, "span4")
helper.add_fluid_row('lifestage_exposed', 2, "span6")
assessment_id = self.instance.experiment.study.assessment.pk
url = reverse('assessment:species_create',
kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 0, url, "Add new species",
"span4")
url = reverse('assessment:strain_create', kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 1, url, "Add new strain",
"span4")
if "generation" in self.fields:
helper.add_fluid_row('siblings', 3, "span4")
helper.add_fluid_row('comments', 2, "span6")
return helper
def setHelper(self):
for fld in ('diagnostic_description', 'summary',
'prevalence_incidence', 'statistical_power_details',
'dose_response_details', 'statistical_metric_description'):
self.fields[fld].widget.attrs['rows'] = 3
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in [
"adjustment_factors", "confounders_considered",
"effects"
]:
widget.attrs['class'] = 'span11'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": self.HELP_TEXT_UPDATE,
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new exposure",
"help_text": self.HELP_TEXT_CREATE,
"cancel_url": self.instance.exposure.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('diagnostic', 2, "span6")
helper.add_fluid_row('summary', 2, "span6")
helper.add_fluid_row('adjustment_factors', 2, "span6")
helper.add_fluid_row('dose_response', 2, "span6")
helper.add_fluid_row('statistical_power', 2, "span6")
helper.add_fluid_row('main_finding', 2, "span6")
helper.add_fluid_row('statistical_metric', 2, "span6")
url = "{% url 'assessment:effect_tag_create' assessment.pk %}"
helper.add_adder("addEffectTags", "Add new effect tag", url)
url = "{% url 'epi:factor_create' assessment.pk %}"
helper.add_adder("addAdj", "Add new adjustment factor", url)
helper.add_adder("addAdjCons", "Add new adjustment factor", url)
return helper
def set_helper(self):
buttons = cfb.FormActions(
cfl.Submit('login', 'Create account'),
cfl.HTML(
'<a role="button" class="btn btn-default" href="{}">Cancel</a>'
.format(reverse('user:login'))),
)
helper = BaseFormHelper(self,
horizontal=False,
legend_text='Create an account',
buttons=buttons)
helper.form_class = 'loginForm'
return helper
def set_helper(self):
help_text = u"""
Please enter your new password twice so we can verify you
typed it in correctly.
"""
buttons = cfb.FormActions(cfl.Submit('submit', 'Change my password'), )
helper = BaseFormHelper(
self,
horizontal=False,
legend_text='Update your password',
help_text=help_text,
buttons=buttons,
)
helper.form_class = 'loginForm'
return helper
def setHelper(self):
inputs = {"legend_text": u"Create an account"}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
helper.layout.append(
cfb.FormActions(
cfl.Submit('login', 'Create account'),
cfl.HTML(
"""<a role="button" class="btn btn-default" href="{}">Cancel</a>"""
.format(reverse('user:login'))),
))
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ["metric_units"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": self.HELP_TEXT_UPDATE,
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new exposure",
"help_text": self.HELP_TEXT_CREATE,
"cancel_url":
self.instance.study_population.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('inhalation', 6, "span2")
helper.add_fluid_row('measured', 3, "span4")
helper.add_fluid_row('metric_description', 3, "span4")
helper.add_fluid_row('age_of_exposure', 3, "span6")
url = reverse(
'assessment:dose_units_create',
kwargs={'pk': self.instance.study_population.study.assessment_id})
helper.addBtnLayout(helper.layout[4], 2, url, "Create units", "span4")
# we want a single "help text" that spans the chemical exposure route checkboxes (inhalation, dermal, oral, etc.)
# if we just attach help_text attribute in the model, it will appear grouped with inhalation. Doing it this way gives
# a little more layout control; just need to find the right spot to do it
inhalation_idx = helper.find_layout_idx_for_field_name('inhalation')
if inhalation_idx is not None:
helper.layout[inhalation_idx].append(
cfl.HTML('<div style="margin-bottom:20px">' +
self.instance.ROUTE_HELP_TEXT + '</div>'))
return helper
def setHelper(self):
buttons = cfb.FormActions(
cfl.Submit('login', 'Create account'),
cfl.HTML(
'<a role="button" class="btn btn-default" href="{}">Cancel</a>'
.format(reverse('user:login'))),
)
helper = BaseFormHelper(
self,
horizontal=False,
legend_text='Create an account',
buttons=buttons)
helper.form_class = 'loginForm'
return helper
def setHelper(self):
inputs = {
"legend_text": u"Update enabled modules",
"help_text": u"""
HAWC is composed of multiple modules, each designed
to capture data and decisions related to specific components of a
health assessment. This screen allows a project-manager to change
which modules are enabled for this assessment. Modules can be
enabled or disabled at any time; content already entered into a particular
module will not be changed when enabling or disabling modules.
""",
"cancel_url": self.instance.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
inputs = {
"legend_text": u"Update enabled modules",
"help_text": u"""
HAWC is composed of multiple modules, each designed
to capture data and decisions related to specific components of a
health assessment. This screen allows a project-manager to change
which modules are enabled for this assessment. Modules can be
enabled or disabled at any time; content already entered into a particular
module will not be changed when enabling or disabling modules.
""",
"cancel_url": self.instance.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self, inputs={}):
for fld in ('full_citation', 'coi_details', 'funding_source', 'ask_author'):
self.fields[fld].widget.attrs['rows'] = 3
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
else:
widget.attrs['class'] = 'checkbox'
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('short_citation', 2, "span6")
helper.add_fluid_row('coi_reported', 2, "span6")
helper.add_fluid_row('contact_author', 2, "span6")
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new endpoint",
"help_text": """
Create a new endpoint. An endpoint may should describe one
measure-of-effect which was measured in the study. It may
or may not contain quantitative data.""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ["effects"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 4, "span3")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('observation_time', 3, "span4")
helper.add_fluid_row('data_reported', 3, "span4")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('response_units', 3, "span4")
helper.add_fluid_row('NOEL', 4, "span3")
helper.add_fluid_row('statistical_test', 3, ["span6", "span3", "span3"])
url = reverse('assessment:effect_tag_create', kwargs={'pk': self.instance.assessment.pk})
helper.addBtnLayout(helper.layout[4], 0, url, "Add new effect tag", "span6")
return helper
def setHelper(self, inputs={}):
for fld in ('full_citation', 'coi_details', 'funding_source',
'ask_author'):
self.fields[fld].widget.attrs['rows'] = 3
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
else:
widget.attrs['class'] = 'checkbox'
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('short_citation', 2, "span6")
helper.add_fluid_row('coi_reported', 2, "span6")
helper.add_fluid_row('contact_author', 2, "span6")
return helper
def setHelper(self):
for fld in ('diagnostic_description', 'summary', 'prevalence_incidence',
'statistical_power_details', 'dose_response_details',
'statistical_metric_description'):
self.fields[fld].widget.attrs['rows'] = 3
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ["adjustment_factors", "confounders_considered", "effects"]:
widget.attrs['class'] = 'span11'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": self.HELP_TEXT_UPDATE,
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new exposure",
"help_text": self.HELP_TEXT_CREATE,
"cancel_url": self.instance.exposure.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('diagnostic', 2, "span6")
helper.add_fluid_row('summary', 2, "span6")
helper.add_fluid_row('adjustment_factors', 2, "span6")
helper.add_fluid_row('dose_response', 2, "span6")
helper.add_fluid_row('statistical_power', 2, "span6")
helper.add_fluid_row('main_finding', 2, "span6")
helper.add_fluid_row('statistical_metric', 2, "span6")
url = "{% url 'assessment:effect_tag_create' assessment.pk %}"
helper.add_adder("addEffectTags", "Add new effect tag", url)
url = "{% url 'epi:factor_create' assessment.pk %}"
helper.add_adder("addAdj", "Add new adjustment factor", url)
helper.add_adder("addAdjCons", "Add new adjustment factor", url)
return helper
def setHelper(self):
help_text = u"""
Please enter your new password twice so we can verify you
typed it in correctly.
"""
buttons = cfb.FormActions(
cfl.Submit('submit', 'Change my password'),
)
helper = BaseFormHelper(
self,
horizontal=False,
legend_text='Update your password',
help_text=help_text,
buttons=buttons,
)
helper.form_class = 'loginForm'
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {
"legend_text": u"Contact HAWC developers",
"help_text": u"""
Have a question, comment, or need some help?
Use this form to to let us know what's going on.
""",
"cancel_url": self.back_href
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
return helper
def setHelper(self):
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {
"legend_text": self.CREATE_LEGEND,
"help_text": self.CREATE_HELP_TEXT,
"form_actions": [
cfl.Submit('save', 'Save'),
cfl.HTML("""<a class="btn" href='#' onclick='window.close()'>Cancel</a>"""),
]
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {
"form_actions": [
cfl.Submit('save', 'Save'),
cfl.HTML('<a class="btn btn-danger" id="deleteSTBtn" href="#deleteST" data-toggle="modal">Delete</a>'),
cfl.HTML('<a class="btn" href="{0}" >Cancel</a>'.format(
reverse("summary:list", kwargs={'pk': self.instance.assessment.id}))),
]
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
inputs = {
"legend_text":
u"Update your password",
"help_text":
u"""
Please enter your new password twice so we can verify you
typed it in correctly.
"""
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
helper.layout.append(
cfb.FormActions(cfl.Submit('submit', 'Change my password'), ))
return helper
def setHelper(self):
for fld in ["inclusion_criteria", "exclusion_criteria", "confounding_criteria"]:
self.fields[fld].widget.update_query_parameters({'related': self.instance.study.assessment_id})
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ['inclusion_criteria', 'exclusion_criteria', 'confounding_criteria']:
widget.attrs['class'] = 'span11'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing study-population.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new study-population",
"help_text": u"""
Create a new study population. Each study-population is a
associated with an epidemiology study. There may be
multiple study populations with a single study,
though this is typically unlikely.""",
"cancel_url": self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, "span6")
helper.add_fluid_row('country', 3, "span4")
helper.add_fluid_row('sex', 4, "span3")
helper.add_fluid_row('n', 2, "span6")
helper.add_fluid_row('age_mean', 3, "span4")
helper.add_fluid_row('age_description', 3, "span4")
helper.add_fluid_row('age_lower', 4, "span3")
url = '{% url "epi:studycriteria_create" assessment.pk %}'
helper.add_adder("addIncCriteria", "Add new criteria", url)
helper.add_adder("addExcCriteria", "Add new criteria", url)
helper.add_adder("addConCriteria", "Add new criteria", url)
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new endpoint",
"help_text": u"""
Create a new endpoint. An endpoint may should describe one
measure-of-effect which was measured in the study. It may
or may not contain quantitative data.""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
helper.add_adder("addEffectTag",
"Add new effect tag",
'{% url "assessment:effect_tag_create" assessment.pk %}')
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 3, "span4")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('observation_time', 2, "span6")
helper.add_fluid_row('data_reported', 4, "span4")
helper.add_fluid_row('response_units', 2, "span6")
helper.add_fluid_row('NOEL', 3, "span4")
helper.add_fluid_row('monotonicity', 3, ["span2", "span5", "span5"])
return helper
def setHelper(self):
if self.instance.id:
inputs = {
"legend_text": u"Update {}".format(self.instance),
"help_text": u"Update an existing endpoint.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": u"Create new endpoint",
"help_text": u"""
Create a new endpoint. An endpoint may should describe one
measure-of-effect which was measured in the study. It may
or may not contain quantitative data.""",
"cancel_url": self.instance.animal_group.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "endpoint"
helper.add_adder(
"addEffectTag", "Add new effect tag",
'{% url "assessment:effect_tag_create" assessment.pk %}')
self.fields['diagnostic'].widget.attrs['rows'] = 2
for fld in ('results_notes', 'endpoint_notes', 'power_notes'):
self.fields[fld].widget.attrs['rows'] = 3
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
helper.add_fluid_row('system', 4, "span3")
helper.add_fluid_row('effects', 2, "span6")
helper.add_fluid_row('data_type', 3, "span4")
helper.add_fluid_row('observation_time', 2, "span6")
helper.add_fluid_row('data_reported', 4, "span4")
helper.add_fluid_row('response_units', 2, "span6")
helper.add_fluid_row('NOEL', 3, "span4")
helper.add_fluid_row('monotonicity', 3, ["span2", "span5", "span5"])
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ['effects']:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
'legend_text': 'Update {}'.format(self.instance),
'help_text': self.HELP_TEXT_UPDATE,
'cancel_url': self.instance.get_absolute_url()
}
else:
inputs = {
'legend_text': 'Create new endpoint',
'help_text': self.HELP_TEXT_CREATE,
'cancel_url': self.instance.experiment.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, 'span6')
helper.add_fluid_row('chemical', 2, 'span6')
helper.add_fluid_row('assay_type', 2, 'span6')
helper.add_fluid_row('effect', 2, 'span6')
helper.add_fluid_row('data_type', 4, 'span3')
helper.add_fluid_row('observation_time', 4, 'span3')
helper.add_fluid_row('monotonicity', 3, 'span4')
helper.add_fluid_row('trend_test', 2, 'span6')
helper.add_fluid_row('endpoint_notes', 2, 'span6')
url = reverse(
'assessment:effect_tag_create',
kwargs={'pk': self.instance.assessment_id}
)
helper.addBtnLayout(helper.layout[2], 1, url, 'Add new effect tag', 'span6')
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in self.CRITERION_FIELDS:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": self.UPDATE_HELP_TEXT,
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": self.CREATE_LEGEND,
"cancel_url": self.instance.study.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('name', 2, "span6")
helper.add_fluid_row('age_profile', 2, "span6")
helper.add_fluid_row('country', 3, "span4")
helper.add_fluid_row('eligible_n', 3, "span4")
helper.add_fluid_row('inclusion_criteria', 3, "span4")
url = reverse('epi:studycriteria_create',
kwargs={'pk': self.instance.study.assessment.pk})
# remove magic number 6; breaks if we change number of elements in the form. This still isn't great; what if comments went away?
btn_target_idx = helper.find_layout_idx_for_field_name('comments') - 1
helper.addBtnLayout(helper.layout[btn_target_idx], 0, url,
"Create criteria", "span4")
helper.addBtnLayout(helper.layout[btn_target_idx], 1, url,
"Create criteria", "span4")
helper.addBtnLayout(helper.layout[btn_target_idx], 2, url,
"Create criteria", "span4")
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
inputs = {
"legend_text": u"Contact HAWC developers",
"help_text": u"""
Have a question, comment, or need some help?
Use this form to to let us know what's going on.
""",
"cancel_url": self.back_href
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = "loginForm"
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
widget.attrs['class'] += " html5text"
if self.instance.id:
inputs = {"legend_text": u"Update {}".format(self.instance)}
else:
inputs = {"legend_text": u"Create new attachment"}
inputs["cancel_url"] = self.instance.get_absolute_url()
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if fld in ["species", "strain"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": "Update an existing animal-group.",
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new animal-group",
"help_text": """
Create a new animal-group. Each animal-group is a set of
animals which are comparable for a given experiment. For
example, they may be a group of F1 rats. Animal-groups may
have different exposures or doses, but should be otherwise
comparable.""",
"cancel_url": self.instance.experiment.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.form_id = "animal_group"
helper.add_fluid_row('species', 3, "span4")
helper.add_fluid_row('lifestage_exposed', 3, "span4")
assessment_id = self.instance.experiment.study.assessment.pk
url = reverse('assessment:species_create', kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 0, url, "Add new species", "span4")
url = reverse('assessment:strain_create', kwargs={'pk': assessment_id})
helper.addBtnLayout(helper.layout[3], 1, url, "Add new strain", "span4")
if "generation" in self.fields:
helper.add_fluid_row('siblings', 3, "span4")
return helper
def setHelper(self):
# by default take-up the whole row-fluid
for fld in self.fields.keys():
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
widget.attrs['class'] += " html5text"
if self.instance.id:
inputs = {"legend_text": u"Update {}".format(self.instance)}
else:
inputs = {"legend_text": u"Create new attachment"}
inputs["cancel_url"] = self.instance.get_absolute_url()
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
return helper
def setHelper(self):
for fld in list(self.fields.keys()):
widget = self.fields[fld].widget
if type(widget) != forms.CheckboxInput:
if fld in ["metric_units"]:
widget.attrs['class'] = 'span10'
else:
widget.attrs['class'] = 'span12'
if type(widget) == forms.Textarea:
widget.attrs['rows'] = 3
if self.instance.id:
inputs = {
"legend_text": "Update {}".format(self.instance),
"help_text": self.HELP_TEXT_UPDATE,
"cancel_url": self.instance.get_absolute_url()
}
else:
inputs = {
"legend_text": "Create new exposure",
"help_text": self.HELP_TEXT_CREATE,
"cancel_url": self.instance.study_population.get_absolute_url()
}
helper = BaseFormHelper(self, **inputs)
helper.form_class = None
helper.add_fluid_row('inhalation', 6, "span2")
helper.add_fluid_row('measured', 3, "span4")
helper.add_fluid_row('metric_description', 3, "span4")
helper.add_fluid_row('age_of_exposure', 3, "span6")
helper.add_fluid_row('n', 3, "span4")
helper.add_fluid_row('variance', 2, "span6")
helper.add_fluid_row('lower_ci', 4, "span3")
url = reverse(
'assessment:dose_units_create',
kwargs={'pk': self.instance.study_population.study.assessment_id}
)
helper.addBtnLayout(helper.layout[4], 2, url, "Create units", "span4")
return helper
