def setup(self): """This is called one time when the module GUI is initialized """ ScriptedLoadableModuleWidget.setup(self) # Create objects that can be used anywhere in the module. Example: in most cases there should be just one # object of the logic class self.logic = CIP_PAARatioLogic() # # Create all the widgets. Example Area mainAreaCollapsibleButton = ctk.ctkCollapsibleButton() mainAreaCollapsibleButton.text = "Main parameters" self.layout.addWidget(mainAreaCollapsibleButton) self.mainAreaLayout = qt.QGridLayout(mainAreaCollapsibleButton) self.label = qt.QLabel("Select the volume") self.label.setStyleSheet("margin:10px 0 20px 7px") self.mainAreaLayout.addWidget(self.label, 0, 0) self.volumeSelector = slicer.qMRMLNodeComboBox() self.volumeSelector.nodeTypes = ("vtkMRMLScalarVolumeNode", "") self.volumeSelector.name = "paa_volumeSelector" self.volumeSelector.selectNodeUponCreation = True self.volumeSelector.autoFillBackground = True self.volumeSelector.addEnabled = True self.volumeSelector.noneEnabled = False self.volumeSelector.removeEnabled = False self.volumeSelector.showHidden = False self.volumeSelector.showChildNodeTypes = False self.volumeSelector.setMRMLScene(slicer.mrmlScene) self.volumeSelector.setStyleSheet( "margin:0px 0 0px 0; padding:2px 0 2px 5px") self.mainAreaLayout.addWidget(self.volumeSelector, 0, 1) self.jumptToTemptativeSliceButton = ctk.ctkPushButton() self.jumptToTemptativeSliceButton.name = "jumptToTemptativeSliceButton" self.jumptToTemptativeSliceButton.text = "Jump to temptative slice" self.jumptToTemptativeSliceButton.toolTip = "Jump to the best estimated slice to place the rulers" self.jumptToTemptativeSliceButton.setIcon( qt.QIcon("{0}/ruler.png".format(SlicerUtil.CIP_ICON_DIR))) self.jumptToTemptativeSliceButton.setIconSize(qt.QSize(20, 20)) self.jumptToTemptativeSliceButton.setStyleSheet("font-weight: bold;") # self.jumptToTemptativeSliceButton.setFixedWidth(140) self.mainAreaLayout.addWidget(self.jumptToTemptativeSliceButton, 1, 1) ### Structure Selector self.structuresGroupbox = qt.QGroupBox("Select the structure") self.groupboxLayout = qt.QVBoxLayout() self.structuresGroupbox.setLayout(self.groupboxLayout) self.mainAreaLayout.addWidget(self.structuresGroupbox, 2, 0) self.structuresButtonGroup = qt.QButtonGroup() # btn = qt.QRadioButton("None") # btn.visible = False # self.structuresButtonGroup.addButton(btn) # self.groupboxLayout.addWidget(btn) btn = qt.QRadioButton("Both") btn.name = "paaButton" btn.checked = True self.structuresButtonGroup.addButton(btn, 0) self.groupboxLayout.addWidget(btn) btn = qt.QRadioButton("Pulmonary Arterial") btn.name = "paRadioButton" self.structuresButtonGroup.addButton(btn, 1) self.groupboxLayout.addWidget(btn) btn = qt.QRadioButton("Aorta") btn.name = "aortaRadioButton" self.structuresButtonGroup.addButton(btn, 2) self.groupboxLayout.addWidget(btn) ### Buttons toolbox self.buttonsToolboxFrame = qt.QFrame() self.buttonsToolboxLayout = qt.QGridLayout() self.buttonsToolboxFrame.setLayout(self.buttonsToolboxLayout) self.mainAreaLayout.addWidget(self.buttonsToolboxFrame, 2, 1) self.placeRulersButton = ctk.ctkPushButton() self.placeRulersButton.text = "Place ruler/s" self.placeRulersButton.name = "placeRulersButton" self.placeRulersButton.toolTip = "Place the ruler/s for the selected structure/s in the current slice" self.placeRulersButton.setIcon( qt.QIcon("{0}/ruler.png".format(SlicerUtil.CIP_ICON_DIR))) self.placeRulersButton.setIconSize(qt.QSize(20, 20)) self.placeRulersButton.setFixedWidth(105) self.placeRulersButton.setStyleSheet("font-weight:bold") self.buttonsToolboxLayout.addWidget(self.placeRulersButton, 0, 0) self.moveUpButton = ctk.ctkPushButton() self.moveUpButton.text = "Move up" self.moveUpButton.toolTip = "Move the selected ruler/s one slice up" self.moveUpButton.setIcon( qt.QIcon("{0}/move_up.png".format(SlicerUtil.CIP_ICON_DIR))) self.moveUpButton.setIconSize(qt.QSize(20, 20)) self.moveUpButton.setFixedWidth(95) self.buttonsToolboxLayout.addWidget(self.moveUpButton, 0, 1) self.moveDownButton = ctk.ctkPushButton() self.moveDownButton.text = "Move down" self.moveDownButton.toolTip = "Move the selected ruler/s one slice down" self.moveDownButton.setIcon( qt.QIcon("{0}/move_down.png".format(SlicerUtil.CIP_ICON_DIR))) self.moveDownButton.setIconSize(qt.QSize(20, 20)) self.moveDownButton.setFixedWidth(95) self.buttonsToolboxLayout.addWidget(self.moveDownButton, 0, 2) self.removeButton = ctk.ctkPushButton() self.removeButton.text = "Remove ALL rulers" self.removeButton.toolTip = "Remove all the rulers for this volume" self.removeButton.setIcon( qt.QIcon("{0}/delete.png".format(SlicerUtil.CIP_ICON_DIR))) self.removeButton.setIconSize(qt.QSize(20, 20)) self.buttonsToolboxLayout.addWidget(self.removeButton, 1, 1, 1, 2, 2) ### Textboxes self.textboxesFrame = qt.QFrame() self.textboxesLayout = qt.QFormLayout() self.textboxesFrame.setLayout(self.textboxesLayout) self.textboxesFrame.setFixedWidth(190) self.mainAreaLayout.addWidget(self.textboxesFrame, 3, 0) self.paTextBox = qt.QLineEdit() self.paTextBox.setReadOnly(True) self.textboxesLayout.addRow("PA (mm): ", self.paTextBox) self.aortaTextBox = qt.QLineEdit() self.aortaTextBox.setReadOnly(True) self.textboxesLayout.addRow("Aorta (mm): ", self.aortaTextBox) self.ratioTextBox = qt.QLineEdit() self.ratioTextBox.name = "ratioTextBox" self.ratioTextBox.setReadOnly(True) self.textboxesLayout.addRow("Ratio PA/A: ", self.ratioTextBox) # Save case data self.reportsCollapsibleButton = ctk.ctkCollapsibleButton() self.reportsCollapsibleButton.text = "Reporting" self.layout.addWidget(self.reportsCollapsibleButton) self.reportsLayout = qt.QHBoxLayout(self.reportsCollapsibleButton) self.storedColumnNames = [ "caseId", "paDiameterMm", "aortaDiameterMm", "pa1r", "pa1a", "pa1s", "pa2r", "pa2a", "pa2s", "a1r", "a1a", "a1s", "a2r", "a2a", "a2s" ] columns = CaseReportsWidget.getColumnKeysNormalizedDictionary( self.storedColumnNames) self.reportsWidget = CaseReportsWidget( self.moduleName, columns, parentWidget=self.reportsCollapsibleButton) self.reportsWidget.setup() # Init state self.resetModuleState() self.preventSavingState = False self.saveStateBeforeEnteringModule() self.preventSavingState = True self.switchToRedView() ##### # Case navigator if SlicerUtil.isSlicerACILLoaded(): caseNavigatorAreaCollapsibleButton = ctk.ctkCollapsibleButton() caseNavigatorAreaCollapsibleButton.text = "Case navigator" self.layout.addWidget(caseNavigatorAreaCollapsibleButton, 0x0020) # caseNavigatorLayout = qt.QVBoxLayout(caseNavigatorAreaCollapsibleButton) # Add a case list navigator from ACIL.ui import CaseNavigatorWidget self.caseNavigatorWidget = CaseNavigatorWidget( self.moduleName, caseNavigatorAreaCollapsibleButton) self.caseNavigatorWidget.setup() self.layout.addStretch() # Connections self.observers = [] self.volumeSelector.connect('currentNodeChanged(vtkMRMLNode*)', self.onVolumeSelectorChanged) self.jumptToTemptativeSliceButton.connect( 'clicked()', self.onJumpToTemptativeSliceButtonClicked) self.placeRulersButton.connect('clicked()', self.onPlaceRulersClicked) self.moveUpButton.connect('clicked()', self.onMoveUpRulerClicked) self.moveDownButton.connect('clicked()', self.onMoveDownRulerClicked) self.removeButton.connect('clicked()', self.onRemoveRulerClicked) self.reportsWidget.addObservable( self.reportsWidget.EVENT_SAVE_BUTTON_CLICKED, self.onSaveReport) # Init state self.resetModuleState() self.preventSavingState = False self.saveStateBeforeEnteringModule() self.preventSavingState = True
def setup(self): """This is called one time when the module GUI is initialized """ ScriptedLoadableModuleWidget.setup(self) # Create objects that can be used anywhere in the module. Example: in most cases there should be just one # object of the logic class self.logic = CIP_ParenchymaSubtypeTrainingLogic() self.currentVolumeLoaded = None self.blockNodeEvents = False ########## # Main area self.mainAreaCollapsibleButton = ctk.ctkCollapsibleButton() self.mainAreaCollapsibleButton.text = "Main area" self.layout.addWidget(self.mainAreaCollapsibleButton, SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.mainLayout = qt.QGridLayout(self.mainAreaCollapsibleButton) # Node selector volumeLabel = qt.QLabel("Active volume: ") volumeLabel.setStyleSheet("margin-left:5px") self.mainLayout.addWidget(volumeLabel, 0, 0) self.volumeSelector = slicer.qMRMLNodeComboBox() self.volumeSelector.nodeTypes = ("vtkMRMLScalarVolumeNode", "") self.volumeSelector.selectNodeUponCreation = True self.volumeSelector.autoFillBackground = True self.volumeSelector.addEnabled = False self.volumeSelector.noneEnabled = False self.volumeSelector.removeEnabled = False self.volumeSelector.showHidden = False self.volumeSelector.showChildNodeTypes = False self.volumeSelector.setMRMLScene(slicer.mrmlScene) self.volumeSelector.setFixedWidth(250) self.volumeSelector.setStyleSheet("margin: 15px 0") #self.volumeSelector.selectNodeUponCreation = False self.mainLayout.addWidget(self.volumeSelector, 0, 1, 1, 3) labelsStyle = "font-weight: bold; margin: 0 0 5px 5px;" # Types Radio Buttons typesLabel = qt.QLabel("Select the type") typesLabel.setStyleSheet(labelsStyle) typesLabel.setFixedHeight(15) self.mainLayout.addWidget(typesLabel, 1, 0) self.typesFrame = qt.QFrame() self.typesLayout = qt.QVBoxLayout(self.typesFrame) self.mainLayout.addWidget(self.typesFrame, 2, 0, SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.typesRadioButtonGroup = qt.QButtonGroup() for key in self.logic.params.mainTypes.iterkeys(): rbitem = qt.QRadioButton(self.logic.params.getMainTypeLabel(key)) self.typesRadioButtonGroup.addButton(rbitem, key) self.typesLayout.addWidget(rbitem) self.typesRadioButtonGroup.buttons()[0].setChecked(True) # Subtypes Radio buttons subtypesLabel = qt.QLabel("Select the subtype") subtypesLabel.setStyleSheet(labelsStyle) subtypesLabel.setFixedHeight(15) self.mainLayout.addWidget(subtypesLabel, 1, 1) self.subtypesRadioButtonGroup = qt.QButtonGroup() self.subtypesFrame = qt.QFrame() self.subtypesFrame.setMinimumHeight(275) self.subtypesLayout = qt.QVBoxLayout(self.subtypesFrame) self.subtypesLayout.setAlignment(SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.subtypesLayout.setStretch(0, 0) self.mainLayout.addWidget( self.subtypesFrame, 2, 1, SlicerUtil.ALIGNMENT_VERTICAL_TOP) # Put the frame in the top # The content will be loaded dynamically every time the main type is modified # Artifact radio buttons self.artifactsLabel = qt.QLabel("Artifact") self.artifactsLabel.setStyleSheet(labelsStyle) self.artifactsLabel.setFixedHeight(15) self.mainLayout.addWidget(self.artifactsLabel, 1, 2) #self.mainLayout.addWidget(qt.QLabel("Select the artifact"), 1, 1) self.artifactsRadioButtonGroup = qt.QButtonGroup() self.artifactsFrame = qt.QFrame() self.artifactsLayout = qt.QVBoxLayout(self.artifactsFrame) self.mainLayout.addWidget(self.artifactsFrame, 2, 2, SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.artifactsRadioButtonGroup = qt.QButtonGroup() for artifactId in self.logic.params.artifacts.iterkeys(): rbitem = qt.QRadioButton( self.logic.params.getArtifactLabel(artifactId)) self.artifactsRadioButtonGroup.addButton(rbitem, artifactId) self.artifactsLayout.addWidget(rbitem) self.artifactsRadioButtonGroup.buttons()[0].setChecked(True) # Load caselist button self.loadButton = ctk.ctkPushButton() self.loadButton.text = "Load fiducials file" self.loadButton.setIcon( qt.QIcon("{0}/open_file.png".format(SlicerUtil.CIP_ICON_DIR))) self.loadButton.setIconSize(qt.QSize(20, 20)) self.loadButton.setFixedWidth(135) self.mainLayout.addWidget(self.loadButton, 3, 0) # Remove fiducial button self.removeLastFiducialButton = ctk.ctkPushButton() self.removeLastFiducialButton.text = "Remove last fiducial" self.removeLastFiducialButton.toolTip = "Remove the last fiducial added" self.removeLastFiducialButton.setIcon( qt.QIcon("{0}/delete.png".format(SlicerUtil.CIP_ICON_DIR))) self.removeLastFiducialButton.setIconSize(qt.QSize(20, 20)) self.removeLastFiducialButton.setFixedWidth(200) self.mainLayout.addWidget(self.removeLastFiducialButton, 3, 1) # Save results button self.saveResultsButton = ctk.ctkPushButton() self.saveResultsButton.setText("Save markups") self.saveResultsButton.toolTip = "Save the markups in the specified directory" self.saveResultsButton.setIcon( qt.QIcon("{0}/Save.png".format(SlicerUtil.CIP_ICON_DIR))) self.saveResultsButton.setIconSize(qt.QSize(20, 20)) self.mainLayout.addWidget(self.saveResultsButton, 4, 0) # Save results directory button defaultPath = os.path.join( SlicerUtil.getSettingsDataFolder(self.moduleName), "results") # Assign a default path for the results path = SlicerUtil.settingGetOrSetDefault(self.moduleName, "SaveResultsDirectory", defaultPath) self.saveResultsDirectoryButton = ctk.ctkDirectoryButton() self.saveResultsDirectoryButton.directory = path self.saveResultsDirectoryButton.setMaximumWidth(375) self.mainLayout.addWidget(self.saveResultsDirectoryButton, 4, 1, 1, 2) ##### # Case navigator self.caseNavigatorWidget = None if SlicerUtil.isSlicerACILLoaded(): caseNavigatorAreaCollapsibleButton = ctk.ctkCollapsibleButton() caseNavigatorAreaCollapsibleButton.text = "Case navigator" self.layout.addWidget(caseNavigatorAreaCollapsibleButton, 0x0020) # caseNavigatorLayout = qt.QVBoxLayout(caseNavigatorAreaCollapsibleButton) # Add a case list navigator from ACIL.ui import CaseNavigatorWidget self.caseNavigatorWidget = CaseNavigatorWidget( self.moduleName, caseNavigatorAreaCollapsibleButton) self.caseNavigatorWidget.setup() # Listen for the event of loading a new labelmap self.caseNavigatorWidget.addObservable( self.caseNavigatorWidget.EVENT_LABELMAP_LOADED, self.__onNewILDClassificationLabelmapLoaded__) self.layout.addStretch() self.updateState() # Connections self.typesRadioButtonGroup.connect("buttonClicked (QAbstractButton*)", self.__onTypesRadioButtonClicked__) self.subtypesRadioButtonGroup.connect( "buttonClicked (QAbstractButton*)", self.__onSubtypesRadioButtonClicked__) self.artifactsRadioButtonGroup.connect( "buttonClicked (QAbstractButton*)", self.__onSubtypesRadioButtonClicked__) self.volumeSelector.connect('currentNodeChanged(vtkMRMLNode*)', self.__onCurrentNodeChanged__) self.loadButton.connect('clicked()', self.openFiducialsFile) self.removeLastFiducialButton.connect( 'clicked()', self.__onRemoveLastFiducialButtonClicked__) # self.saveResultsOpenDirectoryDialogButton.connect('clicked()', self.onOpenDirectoryDialogButtonClicked) self.saveResultsDirectoryButton.connect( "directoryChanged (QString)", self.__onSaveResultsDirectoryChanged__) self.saveResultsButton.connect('clicked()', self.__onSaveResultsButtonClicked__) self.observers = [] self.observers.append( slicer.mrmlScene.AddObserver(slicer.vtkMRMLScene.NodeAddedEvent, self.__onNodeAddedObserver__)) self.observers.append( slicer.mrmlScene.AddObserver(slicer.vtkMRMLScene.EndCloseEvent, self.__onSceneClosed__))
def setup(self): """Init the widget """ # self.firstLoad = True ScriptedLoadableModuleWidget.setup(self) # Create objects that can be used anywhere in the module. Example: in most cases there should be just one # object of the logic class self._initLogic_() ########## # Main area self.mainAreaCollapsibleButton = ctk.ctkCollapsibleButton() self.mainAreaCollapsibleButton.text = "Main area" self.layout.addWidget(self.mainAreaCollapsibleButton, SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.mainLayout = qt.QGridLayout(self.mainAreaCollapsibleButton) # Node selector volumeLabel = qt.QLabel("Active volume: ") volumeLabel.setStyleSheet("margin-left:5px") self.mainLayout.addWidget(volumeLabel, 0, 0) self.volumeSelector = slicer.qMRMLNodeComboBox() self.volumeSelector.nodeTypes = ("vtkMRMLScalarVolumeNode", "") self.volumeSelector.selectNodeUponCreation = True self.volumeSelector.autoFillBackground = True self.volumeSelector.addEnabled = False self.volumeSelector.noneEnabled = False self.volumeSelector.removeEnabled = False self.volumeSelector.showHidden = False self.volumeSelector.showChildNodeTypes = False self.volumeSelector.setMRMLScene(slicer.mrmlScene) self.volumeSelector.setMinimumWidth(150) self.volumeSelector.setStyleSheet("margin: 15px 0") # self.volumeSelector.selectNodeUponCreation = False self.mainLayout.addWidget(self.volumeSelector, 0, 1, 1, 2) self.volumeSelector.connect('currentNodeChanged(vtkMRMLNode*)', self._onMainVolumeChanged_) ### Radio buttons frame self.radioButtonsFrame = qt.QFrame() self.radioButtonsLayout = qt.QHBoxLayout(self.radioButtonsFrame) self.typesFrame = qt.QFrame() self.radioButtonsLayout.addWidget(self.typesFrame) self.typesLayout = qt.QVBoxLayout(self.typesFrame) labelsStyle = "font-weight: bold; margin: 0 0 10px 0px;" # Types Radio Buttons typesLabel = qt.QLabel("Select type") typesLabel.setStyleSheet(labelsStyle) self.typesLayout.addWidget(typesLabel) self.typesRadioButtonGroup = qt.QButtonGroup() for key in self.logic.params.mainTypes.keys(): rbitem = qt.QRadioButton(self.logic.params.getMainTypeLabel(key)) self.typesRadioButtonGroup.addButton(rbitem, key) self.typesLayout.addWidget(rbitem) self.typesRadioButtonGroup.buttons()[0].setChecked(True) # Subtypes Radio buttons # The content will be loaded dynamically every time the main type is modified self.subtypesFrame = qt.QFrame() self.radioButtonsLayout.addWidget(self.subtypesFrame) self.subtypesLayout = qt.QVBoxLayout(self.subtypesFrame) subtypesLabel = qt.QLabel("Select subtype") subtypesLabel.setStyleSheet(labelsStyle) self.subtypesLayout.addWidget(subtypesLabel) self.subtypesLayout.setAlignment(SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.subtypesRadioButtonGroup = qt.QButtonGroup() # Add all the subtypes (we will filter later in "updateState" function) for key in self.logic.params.subtypes.keys(): # Build the description rbitem = qt.QRadioButton(self.logic.params.getSubtypeLabel(key)) self.subtypesRadioButtonGroup.addButton(rbitem, key) self.subtypesLayout.addWidget(rbitem, SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.subtypesLayout.addStretch() # Region radio buttons self.regionsFrame = qt.QFrame() self.radioButtonsLayout.addWidget(self.regionsFrame) self.regionsLayout = qt.QVBoxLayout(self.regionsFrame) regionsLabel = qt.QLabel("Select region") regionsLabel.setStyleSheet(labelsStyle) self.regionsLayout.addWidget(regionsLabel) self.regionsLayout.setAlignment(SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.regionsLayout.setStretch(0, 0) self.regionsRadioButtonGroup = qt.QButtonGroup() self.regionsFrame = qt.QFrame() # Add all the regions for key in self.logic.params.regions.keys(): # Build the description rbitem = qt.QRadioButton(self.logic.params.getRegionLabel(key)) self.regionsRadioButtonGroup.addButton(rbitem, key) self.regionsLayout.addWidget(rbitem, SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.regionsLayout.addStretch() self.regionsRadioButtonGroup.buttons()[0].setChecked(True) # Artifact radio buttons (Add them to the same layout as the type) # self.separatorLabel = qt.QLabel("------------") # labelsStyle = "margin: 5px 0 5px 0;" # self.separatorLabel.setStyleSheet(labelsStyle) # self.typesLayout.addWidget(self.separatorLabel) # self.artifactsLabel = qt.QLabel("Select artifact") # labelsStyle = "font-weight: bold; margin: 15px 0 10px 0;" # self.artifactsLabel.setStyleSheet(labelsStyle) # self.typesLayout.addWidget(self.artifactsLabel) # self.artifactsRadioButtonGroup = qt.QButtonGroup() # for artifactId in self.logic.params.artifacts.iterkeys(): # rbitem = qt.QRadioButton(self.logic.params.getArtifactLabel(artifactId)) # self.artifactsRadioButtonGroup.addButton(rbitem, artifactId) # self.typesLayout.addWidget(rbitem) # self.artifactsRadioButtonGroup.buttons()[0].setChecked(True) # self.typesLayout.setAlignment(SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.typesLayout.addStretch() # Connections self.typesRadioButtonGroup.connect("buttonClicked (QAbstractButton*)", self.__onTypesRadioButtonClicked__) self.subtypesRadioButtonGroup.connect( "buttonClicked (QAbstractButton*)", self.__onSecondaryRadioButtonClicked__) self.regionsRadioButtonGroup.connect( "buttonClicked (QAbstractButton*)", self.__onSecondaryRadioButtonClicked__) # self.artifactsRadioButtonGroup.connect("buttonClicked (QAbstractButton*)", self.__onTypesRadioButtonClicked__) self.mainLayout.addWidget(self.radioButtonsFrame, 2, 0, 1, 3, SlicerUtil.ALIGNMENT_VERTICAL_TOP) # Save results button self.saveResultsButton = ctk.ctkPushButton() self.saveResultsButton.setText("Save results") self.saveResultsButton.toolTip = "Save the results labelmap in the specified directory" self.saveResultsButton.setIcon( qt.QIcon("{0}/Save.png".format(SlicerUtil.CIP_ICON_DIR))) self.saveResultsButton.setIconSize(qt.QSize(20, 20)) self.saveResultsButton.setFixedWidth(135) self.mainLayout.addWidget(self.saveResultsButton, 4, 0) self.saveResultsButton.connect('clicked()', self._onSaveResultsButtonClicked_) # Save results directory button defaultPath = os.path.join( SlicerUtil.getSettingsDataFolder(self.moduleName), "results") # Assign a default path for the results path = SlicerUtil.settingGetOrSetDefault(self.moduleName, "SaveResultsDirectory", defaultPath) self.saveResultsDirectoryButton = ctk.ctkDirectoryButton() self.saveResultsDirectoryButton.directory = path self.saveResultsDirectoryButton.setMaximumWidth(440) self.mainLayout.addWidget(self.saveResultsDirectoryButton, 4, 1, 1, 2) self.saveResultsDirectoryButton.connect( "directoryChanged (QString)", self._onSaveResultsDirectoryChanged_) self._createSegmentEditorWidget_() # MIP viewer (by default it will be hidden) self.mipCollapsibleButton = ctk.ctkCollapsibleButton() self.mipCollapsibleButton.text = "MIP viewer" mipLayout = qt.QVBoxLayout(self.mipCollapsibleButton) self.mainLayout.addWidget(self.mipCollapsibleButton) self.mipViewer = CIPUI.MIPViewerWidget(mipLayout) self.mipCollapsibleButton.setVisible(False) self.mipViewer.setup() self.mipViewer.isCrosshairEnabled = False self.mipCollapsibleButton.collapsed = True ##### # Case navigator self.caseNavigatorWidget = None if SlicerUtil.isSlicerACILLoaded(): caseNavigatorAreaCollapsibleButton = ctk.ctkCollapsibleButton() caseNavigatorAreaCollapsibleButton.text = "Case navigator" self.layout.addWidget(caseNavigatorAreaCollapsibleButton, 0x0020) # caseNavigatorLayout = qt.QVBoxLayout(caseNavigatorAreaCollapsibleButton) # Add a case list navigator from ACIL.ui import CaseNavigatorWidget self.caseNavigatorWidget = CaseNavigatorWidget( self.moduleName, caseNavigatorAreaCollapsibleButton) self.caseNavigatorWidget.setup() # Listen for event in order to save the current labelmap before moving to the next case self.caseNavigatorWidget.addObservable( self.caseNavigatorWidget.EVENT_PRE_NEXT, self._checkSaveChanges_) self.caseNavigatorWidget.addObservable( self.caseNavigatorWidget.EVENT_PRE_PREVIOUS, self._checkSaveChanges_) self.caseNavigatorWidget.addObservable( self.caseNavigatorWidget.EVENT_PRE_LABELMAP_LOAD, self._onPreNavigatorLabelmapLoaded_) self.caseNavigatorWidget.addObservable( self.caseNavigatorWidget.EVENT_LABELMAP_LOADED, self._onNavigatorLabelmapLoaded_) self.layout.addStretch() # Extra Connections self._createSceneObservers_() self.disableEvents = False self.setMainTypeGUIProperties()
def setup(self): """This is called one time when the module GUI is initialized """ ScriptedLoadableModuleWidget.setup(self) # Create objects that can be used anywhere in the module. Example: in most cases there should be just one # object of the logic class self._initLogic_() self.currentVolumeLoaded = None self.blockNodeEvents = False ########## # Main area self.mainAreaCollapsibleButton = ctk.ctkCollapsibleButton() self.mainAreaCollapsibleButton.text = "Main area" self.layout.addWidget(self.mainAreaCollapsibleButton, SlicerUtil.ALIGNMENT_VERTICAL_TOP) self.mainLayout = qt.QGridLayout(self.mainAreaCollapsibleButton) # Node selector volumeLabel = qt.QLabel("Active volume: ") volumeLabel.setStyleSheet("margin-left:5px") self.mainLayout.addWidget(volumeLabel, 0, 0) self.volumeSelector = slicer.qMRMLNodeComboBox() self.volumeSelector.nodeTypes = ("vtkMRMLScalarVolumeNode", "") self.volumeSelector.selectNodeUponCreation = True self.volumeSelector.autoFillBackground = True self.volumeSelector.addEnabled = False self.volumeSelector.noneEnabled = False self.volumeSelector.removeEnabled = False self.volumeSelector.showHidden = False self.volumeSelector.showChildNodeTypes = False self.volumeSelector.setMRMLScene(slicer.mrmlScene) self.volumeSelector.setFixedWidth(250) self.volumeSelector.setStyleSheet("margin: 15px 0") #self.volumeSelector.selectNodeUponCreation = False self.mainLayout.addWidget(self.volumeSelector, 0, 1, 1, 3) self.volumeSelector.connect('currentNodeChanged(vtkMRMLNode*)', self.__onCurrentNodeChanged__) # Radio buttons frame. This will be filled by every child module self.radioButtonsFrame = qt.QFrame() self.mainLayout.addWidget(self.radioButtonsFrame, 2, 0, 1, 3, SlicerUtil.ALIGNMENT_VERTICAL_TOP) # Load caselist button self.loadButton = ctk.ctkPushButton() self.loadButton.text = "Load fiducials file" self.loadButton.setIcon( qt.QIcon("{0}/open_file.png".format(SlicerUtil.CIP_ICON_DIR))) self.loadButton.setIconSize(qt.QSize(20, 20)) self.loadButton.setFixedWidth(135) self.mainLayout.addWidget(self.loadButton, 3, 0) self.loadButton.connect('clicked()', self.openFiducialsFile) # Remove fiducial button self.removeLastFiducialButton = ctk.ctkPushButton() self.removeLastFiducialButton.text = "Remove last fiducial" self.removeLastFiducialButton.toolTip = "Remove the last fiducial added" self.removeLastFiducialButton.setIcon( qt.QIcon("{0}/delete.png".format(SlicerUtil.CIP_ICON_DIR))) self.removeLastFiducialButton.setIconSize(qt.QSize(20, 20)) self.removeLastFiducialButton.setFixedWidth(200) self.mainLayout.addWidget(self.removeLastFiducialButton, 3, 1) self.removeLastFiducialButton.connect( 'clicked()', self.__onRemoveLastFiducialButtonClicked__) # Save results button self.saveResultsButton = ctk.ctkPushButton() self.saveResultsButton.setText("Save markups") self.saveResultsButton.toolTip = "Save the markups in the specified directory" self.saveResultsButton.setIcon( qt.QIcon("{0}/Save.png".format(SlicerUtil.CIP_ICON_DIR))) self.saveResultsButton.setIconSize(qt.QSize(20, 20)) self.saveResultsButton.setFixedWidth(135) self.mainLayout.addWidget(self.saveResultsButton, 4, 0) self.saveResultsButton.connect('clicked()', self.__onSaveResultsButtonClicked__) # Save results directory button defaultPath = os.path.join( SlicerUtil.getSettingsDataFolder(self.moduleName), "results") # Assign a default path for the results path = SlicerUtil.settingGetOrSetDefault(self.moduleName, "SaveResultsDirectory", defaultPath) self.saveResultsDirectoryButton = ctk.ctkDirectoryButton() self.saveResultsDirectoryButton.directory = path self.saveResultsDirectoryButton.setMaximumWidth(375) self.mainLayout.addWidget(self.saveResultsDirectoryButton, 4, 1, 1, 2) self.saveResultsDirectoryButton.connect( "directoryChanged (QString)", self.__onSaveResultsDirectoryChanged__) ##### # Case navigator self.caseNavigatorWidget = None if SlicerUtil.isSlicerACILLoaded(): caseNavigatorAreaCollapsibleButton = ctk.ctkCollapsibleButton() caseNavigatorAreaCollapsibleButton.text = "Case navigator" self.layout.addWidget(caseNavigatorAreaCollapsibleButton, 0x0020) # caseNavigatorLayout = qt.QVBoxLayout(caseNavigatorAreaCollapsibleButton) # Add a case list navigator from ACIL.ui import CaseNavigatorWidget self.caseNavigatorWidget = CaseNavigatorWidget( self.moduleName, caseNavigatorAreaCollapsibleButton) self.caseNavigatorWidget.setup() # Listen for the event of loading a new labelmap # self.caseNavigatorWidget.addObservable(self.caseNavigatorWidget.EVENT_LABELMAP_LOADED, self.__onNewILDClassificationLabelmapLoaded__) self.caseNavigatorWidget.addObservable( self.caseNavigatorWidget.EVENT_BUNDLE_CASE_FINISHED, self.__onFinishCaseBundleLoad__) self.layout.addStretch() # Extra Connections self._createSceneObservers_()