def test_count_seqs(self):
test_seqs = [
">a b", "aattggcc", ">b.xyz stuff", "asdasd", ">c", "qweasd",
">d.foo", "qweasdasd"
]
obs = count_seqs(iter(test_seqs))
exp = 4
self.assertEqual(obs, exp)
obs = count_seqs(iter(test_seqs), subset=['b', 'c', 'foo'])
exp = 2
self.assertEqual(obs, exp)
def test_count_seqs(self):
test_seqs = [">a b",
"aattggcc",
">b.xyz stuff",
"asdasd",
">c",
"qweasd",
">d.foo",
"qweasdasd"]
obs = count_seqs(iter(test_seqs))
exp = 4
self.assertEqual(obs, exp)
obs = count_seqs(iter(test_seqs), subset=['b', 'c', 'foo'])
exp = 2
self.assertEqual(obs, exp)