Пример #1
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 def test_cdhit_from_seqs_synonym(self):
     """CD_HIT should return expected seqs with -c synonym"""
     res = cdhit_from_seqs(dna_seqs, DNA, {'Similarity': 0.8})
     self.assertEqual(res.toFasta(), dna_expected)
Пример #2
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 def test_cdhit_from_seqs(self):
     """CD_HIT should return expected seqs"""
     res = cdhit_from_seqs(dna_seqs, DNA, {'-c': 0.8})
     self.assertEqual(res.toFasta(), dna_expected)
Пример #3
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 def test_cdhit_from_seqs(self):
     """CD_HIT should return expected seqs"""
     res = cdhit_from_seqs(protein_seqs, PROTEIN, {'-c': 0.8})
     self.assertEqual(res.toFasta(), protein_expected)
Пример #4
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 def test_cdhit_from_seqs_synonym(self):
     """CD_HIT should return expected seqs with -c synonym"""
     res = cdhit_from_seqs(dna_seqs, DNA, {'Similarity':0.8})
     self.assertEqual(res.toFasta(), dna_expected)
Пример #5
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 def test_cdhit_from_seqs(self):
     """CD_HIT should return expected seqs"""
     res = cdhit_from_seqs(dna_seqs, DNA, {'-c':0.8})
     self.assertEqual(res.toFasta(), dna_expected)
Пример #6
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 def test_cdhit_from_seqs(self):
     """CD_HIT should return expected seqs"""
     res = cdhit_from_seqs(protein_seqs, PROTEIN, {'-c':0.8})
     self.assertEqual(res.toFasta(), protein_expected)