def test_case_insensitive_get_taxa_by_label(self):
tns = TaxonNamespace(self.str_labels)
labels_upper = [label.upper() for label in self.str_labels if label.upper() != label]
assert labels_upper
# default: case-insensitive
t2 = tns.get_taxa(labels_upper)
self.assertEqual(len(t2), len(labels_upper))
for t, label in zip(t2, labels_upper):
self.assertEqual(t.label.lower(), label.lower())
# test: case sensitive
tns.is_case_sensitive = True
t1 = tns.get_taxa(labels_upper)
self.assertEqual(len(t1), 0)
def test_get_taxa_by_label(self):
tns = TaxonNamespace(self.str_labels)
# label_set = set(self.str_labels)
# taxa = tns.get_taxa(label_set)
taxa = tns.get_taxa(self.str_labels + ["u", "x", "y"])
self.assertEqual(len(taxa), len(self.str_labels))
tx = [t.label for t in taxa]
self.assertEqual(tx, self.str_labels)
def test_get_nonexistant_taxa_by_label(self):
tns = TaxonNamespace(self.str_labels)
check = ["u", "x", "y",]
taxa = tns.get_taxa(check)
self.assertEqual(len(taxa), 0)
