def test_gene_ids_from_protein(self):
ret_by_id = get_gene_ids("ENSP00000288135", "protein")
self.assertTrue("ENSG00000157404" in ret_by_id)
def test_gene_ids_from_exon(self):
ret_by_id = get_gene_ids("ENSE00001074448", "exon")
self.assertTrue("ENSG00000157404" in ret_by_id)
def test_gene_ids_from_gene(self):
ret_by_id = get_gene_ids("ENSG00000157404", "gene")
ret_by_name = get_gene_ids("KIT", "gene")
self.assertTrue("ENSG00000157404" in ret_by_id)
self.assertTrue("ENSG00000157404" in ret_by_name)
self.assertEqual(ret_by_id, ret_by_name)
def test_gene_ids_from_cds(self):
ret_by_id = get_gene_ids("ENST00000288135", "cds")
ret_by_name = get_gene_ids("KIT-201", "cds")
self.assertTrue("ENSG00000157404" in ret_by_id)
self.assertTrue("ENSG00000157404" in ret_by_name)
self.assertEqual(ret_by_id, ret_by_name)