mesh = Grid2D(nx=nx, ny=ny, dx=dx, dy=1.) shift = 1. KMVar = CellVariable(mesh=mesh, value=params['KM'] * shift, hasOld=1) KCVar = CellVariable(mesh=mesh, value=params['KC'] * shift, hasOld=1) TMVar = CellVariable(mesh=mesh, value=params['TM'] * shift, hasOld=1) TCVar = CellVariable(mesh=mesh, value=params['TC'] * shift, hasOld=1) P3Var = CellVariable(mesh=mesh, value=params['P3'] * shift, hasOld=1) P2Var = CellVariable(mesh=mesh, value=params['P2'] * shift, hasOld=1) RVar = CellVariable(mesh=mesh, value=params['R'], hasOld=1) PN = P3Var + P2Var KMscCoeff = params['chiK'] * (RVar + 1) * (1 - KCVar - KMVar.getCellVolumeAverage()) KMspCoeff = params['lambdaK'] / (1 + PN / params['kappaK']) KMEq = TransientTerm() - KMscCoeff + ImplicitSourceTerm(KMspCoeff) TMscCoeff = params['chiT'] * (1 - TCVar - TMVar.getCellVolumeAverage()) TMspCoeff = params['lambdaT'] * (KMVar + params['zetaT']) TMEq = TransientTerm() - TMscCoeff + ImplicitSourceTerm(TMspCoeff) TCscCoeff = params['lambdaT'] * (TMVar * KMVar).getCellVolumeAverage() TCspCoeff = params['lambdaTstar'] TCEq = TransientTerm() - TCscCoeff + ImplicitSourceTerm(TCspCoeff) PIP2PITP = PN / (PN / params['kappam'] + PN.getCellVolumeAverage() / params['kappac'] + 1) + params['zetaPITP'] P3spCoeff = params['lambda3'] * (TMVar + params['zeta3T'])
mesh = Grid1D(nx = nx, dx = dx) shift = 1. KMVar = CellVariable(mesh = mesh, value = params['KM'] * shift, hasOld = 1) KCVar = CellVariable(mesh = mesh, value = params['KC'] * shift, hasOld = 1) TMVar = CellVariable(mesh = mesh, value = params['TM'] * shift, hasOld = 1) TCVar = CellVariable(mesh = mesh, value = params['TC'] * shift, hasOld = 1) P3Var = CellVariable(mesh = mesh, value = params['P3'] * shift, hasOld = 1) P2Var = CellVariable(mesh = mesh, value = params['P2'] * shift, hasOld = 1) RVar = CellVariable(mesh = mesh, value = params['R'], hasOld = 1) PN = P3Var + P2Var KMscCoeff = params['chiK'] * (RVar + 1) * (1 - KCVar - KMVar.getCellVolumeAverage()) KMspCoeff = params['lambdaK'] / (1 + PN / params['kappaK']) KMEq = TransientTerm() - KMscCoeff + ImplicitSourceTerm(KMspCoeff) TMscCoeff = params['chiT'] * (1 - TCVar - TMVar.getCellVolumeAverage()) TMspCoeff = params['lambdaT'] * (KMVar + params['zetaT']) TMEq = TransientTerm() - TMscCoeff + ImplicitSourceTerm(TMspCoeff) TCscCoeff = params['lambdaT'] * (TMVar * KMVar).getCellVolumeAverage() TCspCoeff = params['lambdaTstar'] TCEq = TransientTerm() - TCscCoeff + ImplicitSourceTerm(TCspCoeff) PIP2PITP = PN / (PN / params['kappam'] + PN.getCellVolumeAverage() / params['kappac'] + 1) + params['zetaPITP'] P3spCoeff = params['lambda3'] * (TMVar + params['zeta3T']) P3scCoeff = params['chi3'] * KMVar * (PIP2PITP / (1 + KMVar / params['kappa3']) + params['zeta3PITP']) + params['zeta3']