def draw_graph(stmts, fname):
graphpr = {'rankdir': 'TD'}
nodepr = {'fontsize': 12, 'shape': 'plaintext', 'margin': '0,0', 'pad': 0}
ga = GraphAssembler(stmts, graph_properties=graphpr,
node_properties=nodepr)
ga.make_model()
ga.save_dot('%s.dot' % fname)
ga.save_pdf('%s.pdf' % fname)
def test_save_dot():
st = [Phosphorylation(Agent('MAP2K1'), Agent('MAPK1'))]
ga = GraphAssembler()
ga.add_statements(st)
ga.make_model()
ga.save_dot('/dev/null')
def test_save_dot():
st = [Phosphorylation(Agent('MAP2K1'), Agent('MAPK1'))]
ga = GraphAssembler()
ga.add_statements(st)
ga.make_model()
ga.save_dot('/dev/null')