class myRenderer( DefaultTableCellRenderer ) :
#---------------------------------------------------------------------------
# Name: __init__()
# Role: Constructor - instantiate the JFormattedTextField to be used
#---------------------------------------------------------------------------
def __init__( self ) :
nf = NumberFormat.getInstance()
nf.setMinimumFractionDigits( 2 )
nf.setMaximumFractionDigits( 2 )
self.result = JFormattedTextField(
nf,
horizontalAlignment = JTextField.RIGHT
)
#---------------------------------------------------------------------------
# Name: getTableCellRendererComponent()
# Role: Return the component containing the rendered value
# Note: Called frequently, don't create a new component each time
#---------------------------------------------------------------------------
def getTableCellRendererComponent(
self,
table, # JTable - table containing value
value, # Object - value being rendered
isSelected, # boolean - Is value selected?
hasFocus, # boolean - Does this cell have focus?
rowIndex, # int - Row # (0..N)
vColIndex # int - Col # (0..N)
) :
self.result.setValue( value )
return self.result
def run(self):
self.frame = frame = JFrame('Frame4',
size=(200, 200),
layout=None,
locationRelativeTo=None,
defaultCloseOperation=JFrame.EXIT_ON_CLOSE)
frame.addComponentListener(listener(self))
self.width = JFormattedTextField(NumberFormat.getIntegerInstance(),
columns=4)
self.height = JFormattedTextField(NumberFormat.getIntegerInstance(),
columns=4)
self.x = JFormattedTextField(NumberFormat.getIntegerInstance(),
columns=4)
self.y = JFormattedTextField(NumberFormat.getIntegerInstance(),
columns=4)
items = [[JLabel('Width:'), 11, 7], [self.width, 50, 5],
[JLabel('Height:'), 7, 31], [self.height, 50, 30],
[JLabel('X:'), 35, 55], [self.x, 50, 53],
[JLabel('Y:'), 35, 79], [self.y, 50, 78]]
for item in items:
thing = frame.add(item[0])
size = thing.getPreferredSize()
thing.setBounds(item[1], item[2], size.width, size.height)
frame.setVisible(1)
def __init__( self ) :
nf = NumberFormat.getInstance()
nf.setMinimumFractionDigits( 2 )
nf.setMaximumFractionDigits( 2 )
self.result = JFormattedTextField(
nf,
horizontalAlignment = JTextField.RIGHT
)
def testDateFormat():
textField = JFormattedTextField()
installFormat(textField, SimpleDateFormat('yyyy-MM-dd'))
textField.setText(u'2010-11-9')
textField.commitEdit()
assert type(textField.value) == Date
cal = GregorianCalendar(time=textField.value)
assert cal.get(GregorianCalendar.YEAR) == 2010
assert cal.get(GregorianCalendar.MONTH) == 10 # January = 0
assert cal.get(GregorianCalendar.DAY_OF_MONTH) == 9
def __init__(self, chartFun, isTemporal = False):
self.isTemporal = isTemporal
JPanel()
#self.setBackground(Color.LIGHT_GRAY)
self.chartFun = chartFun
self.enableChartFun = False
self.setLayout(GridLayout(6,2))
self.add(JLabel('CPU Cores'))
cores = JComboBox(['1', '2', '4', '8', '16', '32', '64', '128'])
nprocs = ManagementFactory.getOperatingSystemMXBean().getAvailableProcessors()
pos = min([7, log(ceil(nprocs)) / log(2)])
cores.setSelectedIndex(int(pos))
cores.setMaximumSize(cores.getPreferredSize())
self.cores = cores
self.add(self.cores)
self.add(JLabel('# of sims (x1000) '))
numSims = JComboBox(
map(lambda x: str((10+x)*5), range(10)) +
map(lambda x: str(x*100), range(1,11))
)
numSims.setMaximumSize(numSims.getPreferredSize())
self.numSims = numSims
self.add(self.numSims)
if isTemporal:
self.add(JLabel('"Neutral" Ne'))
self.neutral = JCheckBox()
self.neutral.addActionListener(self)
self.add(self.neutral)
else:
self.add(JLabel('"Neutral" mean Fst'))
self.neutral = JCheckBox()
self.neutral.addActionListener(self)
self.add(self.neutral)
self.add(JLabel('Force mean Fst'))
self.force = JCheckBox()
self.force.addActionListener(self)
self.add(self.force)
self.add(JLabel('Confidence interval '))
ci = JComboBox(['0.95', '0.99', '0.995'])
ci.addItemListener(self)
ci.setMaximumSize(cores.getPreferredSize())
self.ci = ci
self.add(self.ci)
self.add(JLabel('False Disc. Rate'))
fdr = JFormattedTextField(
NumberFormat.getNumberInstance(Locale.US))
fdr.setValue(0.1)
fdr.addPropertyChangeListener(self)
self.add(fdr)
self.fdr = fdr
def addFTF(self, name):
pane = self.frame.getContentPane()
pane.add(JLabel(name))
pane.add(
JFormattedTextField(eval('NumberFormat.' + name),
value=12345.67890,
columns=10))
def testJTextField(self):
firstNameField = JTextField()
lastNameField = JTextField()
birthYearField = JFormattedTextField()
self.group.bind(self.person, u'firstName', firstNameField,
u'text', mode=TWOWAY)
self.group.bind(self.person, u'lastName', lastNameField,
u'text', mode=TWOWAY)
self.group.bind(self.person, u'birthYear', birthYearField,
u'value', mode=TWOWAY)
self.group.bind(self.person,
u'"%s %s, %s" % (firstName, lastName, birthYear)',
self.dummy, u'value')
assert firstNameField.text == u'Joe'
firstNameField.text = u'Mary'
assert self.person.firstName == u'Mary'
assert self.dummy.value == u'Mary Average, 1970'
self.person.firstName = u'Susan'
assert firstNameField.text == u'Susan'
assert self.dummy.value == u'Susan Average, 1970'
self.person.lastName = u'Mediocre'
assert lastNameField.text == u'Mediocre'
assert self.dummy.value == u'Susan Mediocre, 1970'
def addFTF(self, name):
pane = self.frame.getContentPane()
pane.add(JLabel(name))
format = eval('NumberFormat.' + name)
pane.add(JFormattedTextField(format, value=12345.67890))
pane.add(
JTextField(str(format.getMinimumIntegerDigits()),
horizontalAlignment=JTextField.CENTER))
pane.add(
JTextField(str(format.getMaximumIntegerDigits()),
horizontalAlignment=JTextField.CENTER))
pane.add(
JTextField(str(format.getMinimumFractionDigits()),
horizontalAlignment=JTextField.CENTER))
pane.add(
JTextField(str(format.getMaximumFractionDigits()),
horizontalAlignment=JTextField.CENTER))
pane.add(
JTextField(str(format.getRoundingMode()),
horizontalAlignment=JTextField.CENTER))
pane.add(
JTextField(str(format.isGroupingUsed()),
horizontalAlignment=JTextField.CENTER))
pane.add(
JTextField(str(format.isParseIntegerOnly()),
horizontalAlignment=JTextField.CENTER))
def __init__(self):
nf = NumberFormat.getInstance()
nf.setMinimumFractionDigits(2)
nf.setMaximumFractionDigits(2)
self.result = JFormattedTextField(nf,
border=None,
horizontalAlignment=JTextField.RIGHT)
self.DTCR = DefaultTableCellRenderer()
def testDateFormat():
textField = JFormattedTextField()
installFormat(textField, SimpleDateFormat('yyyy-MM-dd'))
textField.setText(u'2010-11-9')
textField.commitEdit()
assert type(textField.value) == Date
cal = GregorianCalendar(time=textField.value)
assert cal.get(GregorianCalendar.YEAR) == 2010
assert cal.get(GregorianCalendar.MONTH) == 10 # January = 0
assert cal.get(GregorianCalendar.DAY_OF_MONTH) == 9
def initComponents(self):
peopleTableModel = ObjectTableModel(
[], (u'First name', String, 'firstName'),
(u'Last name', String, 'lastName'),
(u'Birth year', Integer, 'birthYear'))
self.peopleTable = JTable(peopleTableModel,
selectionMode=SINGLE_SELECTION)
# Create a selection holder that tracks the row selection and
# notifies the table model of any changes made to the object
self.selection = TableSelectionMirror(self.peopleTable)
self.firstNameField = JTextField()
self.lastNameField = JTextField()
self.birthYearField = JFormattedTextField()
installNumberFormat(self.birthYearField, int, groupingUsed=False)
self.summaryField = JTextField(15, editable=False)
self.addButton = JButton(u'Add person')
self.removeButton = JButton(u'Remove person')
def __init__(self, chartFun, isTemporal = False):
self.isTemporal = isTemporal
JPanel()
#self.setBackground(Color.LIGHT_GRAY)
self.chartFun = chartFun
self.enableChartFun = False
self.setLayout(GridLayout(6,2))
self.add(JLabel('CPU Cores'))
nprocs = ManagementFactory.getOperatingSystemMXBean().getAvailableProcessors()
procvals = sorted(set([nprocs, 1, 2, 4, 8, 16, 32, 64, 128]))
cores = JComboBox(procvals)
cores.setSelectedIndex(procvals.index(nprocs))
cores.setMaximumSize(cores.getPreferredSize())
self.cores = cores
self.add(self.cores)
self.add(JLabel('# of sims (x1000) '))
numSims = JComboBox(
map(lambda x: str((10+x)*5), range(10)) +
map(lambda x: str(x*100), range(1,11))
)
numSims.setMaximumSize(numSims.getPreferredSize())
self.numSims = numSims
self.add(self.numSims)
if isTemporal:
self.add(JLabel('"Neutral" Ne'))
self.neutral = JCheckBox()
self.neutral.addActionListener(self)
self.add(self.neutral)
else:
self.add(JLabel('"Neutral" mean Fst'))
self.neutral = JCheckBox()
self.neutral.addActionListener(self)
self.add(self.neutral)
self.add(JLabel('Force mean Fst'))
self.force = JCheckBox()
self.force.addActionListener(self)
self.add(self.force)
self.add(JLabel('Confidence interval '))
ci = JComboBox(['0.95', '0.99', '0.995'])
ci.addItemListener(self)
ci.setMaximumSize(cores.getPreferredSize())
self.ci = ci
self.add(self.ci)
self.add(JLabel('False Disc. Rate'))
fdr = JFormattedTextField(
NumberFormat.getNumberInstance(Locale.US))
fdr.setValue(0.1)
fdr.addPropertyChangeListener(self)
self.add(fdr)
self.fdr = fdr
plateGrid.close()
###########################################################################
##### End GUI classes #####
###########################################################################
###########################################################################
##### Main code #####
###########################################################################
# Set up the fields for the SWING interface
minField = JFormattedTextField( 0 )
minField.addActionListener( ChangedMin(minField) )
maxField = JFormattedTextField( 255 )
maxField.addActionListener( ChangedMax(maxField) )
scoreField = JTextField( "" )
scoreField.addActionListener( NextImage(scoreField) )
scoreField.addActionListener( WriteScore(scoreField) )
button = JButton("Previous image")
button.addActionListener( PreviousImage(scoreField) )
# Pack all the fields into a JPanel
all = JPanel()
layout = GridLayout(4, 1)
def numberFormatterTest(numType, expectedType, text, nullable):
textField = JFormattedTextField()
installNumberFormat(textField, numType, nullable=nullable)
textField.setText(text)
textField.commitEdit()
assert type(textField.value) == expectedType
def numberFormatterTest(numType, expectedType, text, nullable):
textField = JFormattedTextField()
installNumberFormat(textField, numType, nullable=nullable)
textField.setText(text)
textField.commitEdit()
assert type(textField.value) == expectedType
def __init__(self):
nf = NumberFormat.getInstance()
nf.setMinimumFractionDigits(2)
nf.setMaximumFractionDigits(2)
self.result = JFormattedTextField(nf)
def __init__(self, menuHandles, manager, isDominant, systemPanel, isTemporal=False):
self.systemPanel = systemPanel
self.knownPops = 0
self.ignoreChanges = True
JPanel()
self.menuHandles = menuHandles
self.isDominant = isDominant
self.isTemporal = isTemporal
if isDominant:
self.setLayout(GridLayout(8, 2))
else:
self.setLayout(GridLayout(5, 2))
if isTemporal:
self.add(JLabel("Ne"))
ne = JFormattedTextField(NumberFormat.getNumberInstance(Locale.US))
ne.addPropertyChangeListener(self)
self.ne = ne
self.add(ne)
else:
self.add(JLabel("Attempted Fst"))
fst = JFormattedTextField(NumberFormat.getNumberInstance(Locale.US))
fst.addPropertyChangeListener(self)
self.fst = fst
self.add(fst)
self.add(JLabel("Expected total pops"))
pops = JFormattedTextField(NumberFormat.getIntegerInstance(Locale.US))
pops.addPropertyChangeListener(self)
# self.pops = JComboBox(['1', '2', '4', '8', '12', '16'])
self.pops = pops
self.add(self.pops)
if not isDominant and not isTemporal:
self.add(JLabel("Mutation model"))
self.mut = JComboBox(["Infinite Alleles", "Stepwise"])
self.mut.addItemListener(self)
self.add(self.mut)
self.add(JLabel("Subsample size"))
sampleSize = JFormattedTextField(NumberFormat.getIntegerInstance(Locale.US))
sampleSize.addPropertyChangeListener(self)
self.sampleSize = sampleSize
self.add(self.sampleSize)
if isDominant:
self.add(JLabel("Theta"))
theta = JFormattedTextField(NumberFormat.getNumberInstance(Locale.US))
theta.addPropertyChangeListener(self)
self.theta = theta
self.add(theta)
theta.setValue(0.1)
self.add(JLabel("Beta-a"))
beta1 = JFormattedTextField(NumberFormat.getNumberInstance(Locale.US))
beta1.addPropertyChangeListener(self)
self.beta1 = beta1
self.add(beta1)
beta1.setValue(0.25)
self.add(JLabel("Beta-b"))
beta2 = JFormattedTextField(NumberFormat.getNumberInstance(Locale.US))
beta2.addPropertyChangeListener(self)
self.beta2 = beta2
self.add(beta2)
beta2.setValue(0.25)
self.add(JLabel("Critical frequency"))
crit = JFormattedTextField(NumberFormat.getNumberInstance(Locale.US))
crit.addPropertyChangeListener(self)
self.crit = crit
self.add(crit)
crit.setValue(0.99)
run = JButton("Run!")
run.addActionListener(manager)
run.setActionCommand("RunFDist")
self.run = run
self.add(run)
cancel = JButton("Stop")
cancel.addActionListener(manager)
cancel.setActionCommand("CancelFDist")
self.cancel = cancel
def init_components(self):
self.panel0 = JPanel()
self.rbgPanel0 = ButtonGroup()
self.gbPanel0 = GridBagLayout()
self.gbcPanel0 = GridBagConstraints()
self.panel0.setLayout(self.gbPanel0)
self.host_L = JLabel("Host:")
self.host_L.setEnabled(True)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 1
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.host_L, self.gbcPanel0)
self.panel0.add(self.host_L)
self.port_L = JLabel("Port:")
self.port_L.setEnabled(True)
self.gbcPanel0.gridx = 1
self.gbcPanel0.gridy = 1
self.gbcPanel0.gridwidth = 2
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.port_L, self.gbcPanel0)
self.panel0.add(self.port_L)
self.host_TF = JTextField(10)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 2
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.host_TF, self.gbcPanel0)
self.panel0.add(self.host_TF)
format = NumberFormat.getInstance()
format.setGroupingUsed(False)
port_formatter = NumberFormatter(format)
port_formatter.setValueClass(Integer)
port_formatter.setAllowsInvalid(False)
port_formatter.setMinimum(Integer(0))
port_formatter.setMaximum(Integer(65535))
self.port_TF = JFormattedTextField(port_formatter)
self.gbcPanel0.gridx = 1
self.gbcPanel0.gridy = 2
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.port_TF, self.gbcPanel0)
self.panel0.add(self.port_TF)
self.blank_1_L = JLabel(" ")
self.blank_1_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 3
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_1_L, self.gbcPanel0)
self.panel0.add(self.blank_1_L)
self.image_formats_L = JLabel("Format of images (separator \";\"):")
self.port_L.setEnabled(True)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 4
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.image_formats_L, self.gbcPanel0)
self.panel0.add(self.image_formats_L)
self.image_formats_TF = JTextField(10)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 5
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.image_formats_TF, self.gbcPanel0)
self.panel0.add(self.image_formats_TF)
self.blank_2_L = JLabel(" ")
self.blank_2_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 6
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_2_L, self.gbcPanel0)
self.panel0.add(self.blank_2_L)
self.min_probability_L = JLabel("Confidence minimum (%):")
self.port_L.setEnabled(True)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 7
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.min_probability_L, self.gbcPanel0)
self.panel0.add(self.min_probability_L)
min_probabilty_formatter = NumberFormatter(format)
min_probabilty_formatter.setValueClass(Integer)
min_probabilty_formatter.setAllowsInvalid(False)
min_probabilty_formatter.setMinimum(Integer(0))
min_probabilty_formatter.setMaximum(Integer(100))
self.min_probability_TF = JFormattedTextField(min_probabilty_formatter)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 8
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.min_probability_TF, self.gbcPanel0)
self.panel0.add(self.min_probability_TF)
self.blank_3_L = JLabel(" ")
self.blank_3_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 9
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_3_L, self.gbcPanel0)
self.panel0.add(self.blank_3_L)
self.min_file_size_L = JLabel("Minimum file size (KB):")
self.min_file_size_L.setEnabled(True)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 10
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.min_file_size_L, self.gbcPanel0)
self.panel0.add(self.min_file_size_L)
min_file_size_formatter = NumberFormatter(format)
min_file_size_formatter.setValueClass(Integer)
min_file_size_formatter.setAllowsInvalid(False)
min_file_size_formatter.setMinimum(Integer(0))
self.min_file_size_TF = JFormattedTextField(min_file_size_formatter)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 11
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.min_file_size_TF, self.gbcPanel0)
self.panel0.add(self.min_file_size_TF)
self.blank_4_L = JLabel(" ")
self.blank_4_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 12
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_4_L, self.gbcPanel0)
self.panel0.add(self.blank_4_L)
self.detectable_obejcts_BTN = \
JButton("List of Objects to Detect", actionPerformed=self.show_detectable_objects_dialog)
# self.save_Settings_BTN.setPreferredSize(Dimension(1, 20))
self.rbgPanel0.add(self.detectable_obejcts_BTN)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 13
self.gbPanel0.setConstraints(self.detectable_obejcts_BTN,
self.gbcPanel0)
self.panel0.add(self.detectable_obejcts_BTN)
self.blank_5_L = JLabel(" ")
self.blank_5_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 14
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_5_L, self.gbcPanel0)
self.panel0.add(self.blank_5_L)
self.error_message = JLabel("", JLabel.CENTER)
self.error_message.setForeground(Color.red)
self.error_message.setEnabled(True)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 15
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.error_message, self.gbcPanel0)
self.panel0.add(self.error_message)
self.message = JLabel("", JLabel.CENTER)
self.message.setEnabled(True)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 16
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.message, self.gbcPanel0)
self.panel0.add(self.message)
self.save_settings_BTN = JButton("Save Settings",
actionPerformed=self.save_settings)
# self.save_Settings_BTN.setPreferredSize(Dimension(1, 20))
self.rbgPanel0.add(self.save_settings_BTN)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 17
self.gbPanel0.setConstraints(self.save_settings_BTN, self.gbcPanel0)
self.panel0.add(self.save_settings_BTN)
self.blank_6_L = JLabel(" ")
self.blank_6_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 18
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_6_L, self.gbcPanel0)
self.panel0.add(self.blank_6_L)
self.blank_7_L = JLabel(" ")
self.blank_7_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 19
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_7_L, self.gbcPanel0)
self.panel0.add(self.blank_7_L)
self.check_server_connection_BTN = \
JButton("Check server connection", actionPerformed=self.check_server_connection)
# self.save_Settings_BTN.setPreferredSize(Dimension(1, 20))
self.rbgPanel0.add(self.check_server_connection_BTN)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 20
self.gbPanel0.setConstraints(self.check_server_connection_BTN,
self.gbcPanel0)
self.panel0.add(self.check_server_connection_BTN)
self.blank_8_L = JLabel(" ")
self.blank_8_L.setEnabled(True)
self.gbcPanel0.gridx = 2
self.gbcPanel0.gridy = 21
self.gbcPanel0.gridwidth = 1
self.gbcPanel0.gridheight = 1
self.gbcPanel0.fill = GridBagConstraints.BOTH
self.gbcPanel0.weightx = 1
self.gbcPanel0.weighty = 0
self.gbcPanel0.anchor = GridBagConstraints.NORTH
self.gbPanel0.setConstraints(self.blank_8_L, self.gbcPanel0)
self.panel0.add(self.blank_8_L)
self.text_editor_BTN = \
JButton("Open config file", actionPerformed=self.open_text_editor)
# self.save_Settings_BTN.setPreferredSize(Dimension(1, 20))
self.rbgPanel0.add(self.text_editor_BTN)
self.gbcPanel0.gridx = 0
self.gbcPanel0.gridy = 22
self.gbPanel0.setConstraints(self.text_editor_BTN, self.gbcPanel0)
self.panel0.add(self.text_editor_BTN)
self.add(self.panel0)
def __init__(self,
menuHandles,
manager,
isDominant,
systemPanel,
isTemporal=False):
self.systemPanel = systemPanel
self.knownPops = 0
self.ignoreChanges = True
JPanel()
self.menuHandles = menuHandles
self.isDominant = isDominant
self.isTemporal = isTemporal
if isDominant:
self.setLayout(GridLayout(8, 2))
else:
self.setLayout(GridLayout(5, 2))
if isTemporal:
self.add(JLabel('Ne'))
ne = JFormattedTextField(NumberFormat.getNumberInstance(Locale.US))
ne.addPropertyChangeListener(self)
self.ne = ne
self.add(ne)
self.add(JLabel('Expected total samples'))
else:
self.add(JLabel('Attempted Fst'))
fst = JFormattedTextField(NumberFormat.getNumberInstance(
Locale.US))
fst.addPropertyChangeListener(self)
self.fst = fst
self.add(fst)
self.add(JLabel('Expected total pops'))
pops = JFormattedTextField(NumberFormat.getIntegerInstance(Locale.US))
pops.addPropertyChangeListener(self)
# self.pops = JComboBox(['1', '2', '4', '8', '12', '16'])
self.pops = pops
self.add(self.pops)
if not isDominant and not isTemporal:
self.add(JLabel('Mutation model'))
self.mut = JComboBox(['Infinite Alleles', 'Stepwise'])
self.mut.addItemListener(self)
self.add(self.mut)
else:
self.mut = None
self.add(JLabel('Subsample size'))
sampleSize = JFormattedTextField(
NumberFormat.getIntegerInstance(Locale.US))
sampleSize.addPropertyChangeListener(self)
self.sampleSize = sampleSize
self.add(self.sampleSize)
if isDominant:
self.add(JLabel('Theta'))
theta = JFormattedTextField(
NumberFormat.getNumberInstance(Locale.US))
theta.addPropertyChangeListener(self)
self.theta = theta
self.add(theta)
theta.setValue(0.1)
self.add(JLabel('Beta-a'))
beta1 = JFormattedTextField(
NumberFormat.getNumberInstance(Locale.US))
beta1.addPropertyChangeListener(self)
self.beta1 = beta1
self.add(beta1)
beta1.setValue(0.25)
self.add(JLabel('Beta-b'))
beta2 = JFormattedTextField(
NumberFormat.getNumberInstance(Locale.US))
beta2.addPropertyChangeListener(self)
self.beta2 = beta2
self.add(beta2)
beta2.setValue(0.25)
self.add(JLabel('Critical frequency'))
crit = JFormattedTextField(
NumberFormat.getNumberInstance(Locale.US))
crit.addPropertyChangeListener(self)
self.crit = crit
self.add(crit)
crit.setValue(0.99)
run = JButton('Run!')
run.addActionListener(manager)
run.setActionCommand('RunFDist')
self.run = run
self.add(run)
def run( self ) :
#---------------------------------------------------------------------------
# Name: label()
# Role: Instantiate a Right aligned label with the specified text
#---------------------------------------------------------------------------
def label( text ) :
return JLabel(
text + ' ',
horizontalAlignment = SwingConstants.RIGHT
)
frame = JFrame(
'PropertyListener',
layout = BorderLayout(),
locationRelativeTo = None,
size = ( 400, 300 ),
defaultCloseOperation = JFrame.EXIT_ON_CLOSE
)
pane = JPanel( layout = GridLayout( 0, 2 ) )
pane.add( label( 'Number:' ) )
pane.add(
JFormattedTextField(
NumberFormat.getNumberInstance(),
value = 12345.67890,
columns = 10,
propertyChange = self.changed
)
)
pane.add( label( 'Currency:' ) )
pane.add(
JFormattedTextField(
NumberFormat.getCurrencyInstance(),
value = 12345.67890,
columns = 10,
propertyChange = self.changed
)
)
frame.add(
JSplitPane(
JSplitPane.HORIZONTAL_SPLIT,
pane,
JButton(
'Clear',
actionPerformed = self.clear
),
),
BorderLayout.NORTH
)
self.textArea = JTextArea(
rows = 10,
columns = 40,
editable = 0,
focusable = 0,
font = Font( 'Courier' , Font.BOLD, 12 )
)
frame.add(
JScrollPane( self.textArea ),
BorderLayout.CENTER
)
frame.setVisible( 1 )