def compress(taxid=9606, target='../gpickle'):
if not os.path.exists(target):
os.mkdir(target)
source = os.path.join(global_settings.pickle_folder, f'taxid{taxid}')
for pf in os.listdir(source):
p = ProteinCore().load(file=os.path.join(source, pf))
p.gdump(file=os.path.join(target, os.path.splitext(pf)[0] + '.gzp'))
def compress(
taxid=9606,
target='/home/matteo/Coding/Michelanglo/MichelaNGLo-human-protein-data/gpickle'
):
if not os.path.exists(target):
os.mkdir(target)
source = os.path.join(global_settings.pickle_folder, f'taxid{taxid}')
for pf in os.listdir(source):
p = ProteinCore().load(file=os.path.join(source, pf))
p.gdump(file=os.path.join(target, os.path.splitext(pf)[0] + '.gzp'))