def test_GetParticipantIDs():
kwargs = {
Constants.NIDM_PROJECT_NAME: "FBIRN_PhaseII",
Constants.NIDM_PROJECT_IDENTIFIER: 9610,
Constants.NIDM_PROJECT_DESCRIPTION: "Test investigation"
}
project = Project(uuid="_123456", attributes=kwargs)
session = Session(uuid="_13579", project=project)
acq = Acquisition(uuid="_15793", session=session)
acq2 = Acquisition(uuid="_15795", session=session)
person = acq.add_person(attributes=({Constants.NIDM_SUBJECTID: "9999"}))
acq.add_qualified_association(person=person,
role=Constants.NIDM_PARTICIPANT)
person2 = acq2.add_person(attributes=({Constants.NIDM_SUBJECTID: "8888"}))
acq2.add_qualified_association(person=person2,
role=Constants.NIDM_PARTICIPANT)
#save a turtle file
with open("test.ttl", 'w') as f:
f.write(project.serializeTurtle())
participant_list = Query.GetParticipantIDs(["test.ttl"])
remove("test.ttl")
assert (participant_list['ID'].str.contains('9999').any())
assert (participant_list['ID'].str.contains('8888').any())
def setup():
global cmu_test_project_uuid, cmu_test_subject_uuid
projects = Query.GetProjectsUUID(ABIDE_FILES)
for p in projects:
proj_info = nidm.experiment.Navigate.GetProjectAttributes(
ABIDE_FILES, p)
if 'dctypes:title' in proj_info.keys(
) and proj_info['dctypes:title'] == 'ABIDE CMU_a Site':
cmu_test_project_uuid = p
break
subjects = Query.GetParticipantIDs(ABIDE_FILES)
cmu_test_subject_uuid = subjects['uuid'][0]