def prepare(root,config): enable_ahmed = tools.to_bool(tools.setDefaultConfigOption(config,'AHMED','enable_ahmed','false')) if enable_ahmed: if not config.has_option('AHMED','file_name'): raise Exception('Need to give full path of tar.gz archived file with AHMED 1.0 release') ahmed_fname=config.get('AHMED','file_name') ahmed_fname=tools.normalizePath(config,ahmed_fname) config.set('AHMED','with_ahmed','ON') prefix=config.get('Main','prefix') dep_build_dir = config.get('Main','dependency_build_dir') arch = config.get('Main','architecture') if arch == 'ia32': config.set('AHMED','enable64','OFF') else: config.set('AHMED','enable64','ON') ahmed_full_dir=dep_build_dir+"/ahmed" tools.checkDeleteDirectory(ahmed_full_dir) if sys.platform.startswith('darwin'): config.set('AHMED','lib',prefix+"/bempp/lib/libAHMED.dylib") elif sys.platform.startswith('linux'): config.set('AHMED','lib',prefix+"/bempp/lib/libAHMED.so") else: raise Exception("Platform not supported") config.set('AHMED','include_dir',prefix+"/bempp/include/AHMED") if not os.path.isfile(ahmed_fname): raise Exception("File '"+ahmed_fname+"' does not exist") print "Extracting AHMED" tools.extract_file(ahmed_fname,dep_build_dir) os.rename(dep_build_dir+"/AHMED_1.0",ahmed_full_dir) shutil.copy(root+"/installer/build_scripts/posix/ahmed_build.sh",ahmed_full_dir+"/ahmed_build.sh") print "Patching AHMED" cwd=os.getcwd() os.chdir(ahmed_full_dir) for s in ("ahmed_cmake.patch", "ahmed_addGeHGeH_single_precision.patch", "ahmed_changelog_H.h.patch", "ahmed_pass_clusters_to_aca_matgen_apprx.h.patch", "ahmed_generic_aca_apprx.h.patch", "ahmed_check_error_apprx.h.patch", "ahmed_bbx_apprx.h.patch", "ahmed_pass_clusters_to_aca_matgen_ACA.h.patch", "ahmed_frobenius_norm_ACA.h.patch", "ahmed_zero_pu_pv_ACA.h.patch", "ahmed_retry_if_zero_and_orig_cross_ACA.h.patch", "ahmed_changelog_ACA.h.patch", "ahmed_permuted_indices_bemcluster.h.patch", "ahmed_changelog_bemcluster.h.patch", "ahmed_omp.patch", "ahmed_basmod_h.patch", "ahmed_mblock.patch"): py_patch.fromfile(root+"/installer/patches/"+s).apply() shutil.copy(root+"/installer/patches/ahmed_bbx_bbxbemcluster.h", "./Include/bbxbemcluster.h") shutil.copy(root+"/installer/patches/ahmed_bbx_bbxbemblcluster.h", "./Include/bbxbemblcluster.h") os.chdir(cwd) tools.setCompilerOptions(config,'AHMED') else: config.set('AHMED','with_ahmed','OFF')
def get_mkl_dirs_and_libs_redistributable(config, lib_dir, extension): mkl_tarball = config.get('MKL','tarball') mkl_tarball = tools.normalizePath(config,mkl_tarball) print 'Extracting MKL redistributables' tools.extract_file(mkl_tarball,lib_dir) mkl_dirs = [lib_dir] mkl_libs = config.get('MKL','lib').split(";") mkl_libs = [s.strip() for s in mkl_libs] return mkl_dirs,mkl_libs
def get_mkl_dirs_and_libs_redistributable(config, lib_dir, extension): mkl_tarball = config.get('MKL', 'tarball') mkl_tarball = tools.normalizePath(config, mkl_tarball) print 'Extracting MKL redistributables' tools.extract_file(mkl_tarball, lib_dir) mkl_dirs = [lib_dir] mkl_libs = config.get('MKL', 'lib').split(";") mkl_libs = [s.strip() for s in mkl_libs] return mkl_dirs, mkl_libs
def prepare(root, config): enable_ahmed = tools.to_bool( tools.setDefaultConfigOption(config, 'AHMED', 'enable_ahmed', 'false')) if enable_ahmed: if not config.has_option('AHMED', 'file_name'): raise Exception( 'Need to give full path of tar.gz archived file with AHMED 1.0 release' ) ahmed_fname = config.get('AHMED', 'file_name') ahmed_fname = tools.normalizePath(config, ahmed_fname) config.set('AHMED', 'with_ahmed', 'ON') prefix = config.get('Main', 'prefix') dep_build_dir = config.get('Main', 'dependency_build_dir') arch = config.get('Main', 'architecture') if arch == 'ia32': config.set('AHMED', 'enable64', 'OFF') else: config.set('AHMED', 'enable64', 'ON') ahmed_full_dir = dep_build_dir + "/ahmed" tools.checkDeleteDirectory(ahmed_full_dir) if sys.platform.startswith('darwin'): config.set('AHMED', 'lib', prefix + "/bempp/lib/libAHMED.dylib") elif sys.platform.startswith('linux'): config.set('AHMED', 'lib', prefix + "/bempp/lib/libAHMED.so") else: raise Exception("Platform not supported") config.set('AHMED', 'include_dir', prefix + "/bempp/include/AHMED") if not os.path.isfile(ahmed_fname): raise Exception("File '" + ahmed_fname + "' does not exist") print "Extracting AHMED" tools.extract_file(ahmed_fname, dep_build_dir) os.rename(dep_build_dir + "/AHMED_1.0", ahmed_full_dir) shutil.copy(root + "/installer/build_scripts/posix/ahmed_build.sh", ahmed_full_dir + "/ahmed_build.sh") print "Patching AHMED" cwd = os.getcwd() os.chdir(ahmed_full_dir) for s in ("ahmed_cmake.patch", "ahmed_addGeHGeH_single_precision.patch", "ahmed_pass_clusters_to_aca_matgen_apprx.h.patch", "ahmed_generic_aca_apprx.h.patch", "ahmed_check_error_apprx.h.patch", "ahmed_pass_clusters_to_aca_matgen_ACA.h.patch", "ahmed_frobenius_norm_ACA.h.patch", "ahmed_zero_pu_pv_ACA.h.patch", "ahmed_retry_if_zero_and_orig_cross_ACA.h.patch", "ahmed_permuted_indices_bemcluster.h.patch"): py_patch.fromfile(root + "/installer/patches/" + s).apply() os.chdir(cwd) tools.setCompilerOptions(config, 'AHMED') else: config.set('AHMED', 'with_ahmed', 'OFF')
def prepare(root,config): # Test whether the main options are present if not config.has_option('Main','prefix'): raise Exception('prefix not defined') setDefaultConfigOption(config,'Main','cc','gcc') setDefaultConfigOption(config,'Main','cxx','g++') setDefaultConfigOption(config,'Main','architecture','intel64') setDefaultConfigOption(config,'Main','flags',"") setDefaultConfigOption(config,'Main','libs',"") setDefaultConfigOption(config,'Main','cflags',"") setDefaultConfigOption(config,'Main','cxxflags',"") setDefaultConfigOption(config,'Main','root_dir',root) setDefaultConfigOption(config,'Main','build_jobs',"1") # Retrieve path to configuration file optfile = config.get('Main','optfile') # Retrieve build directory setDefaultConfigOption(config,'Main','build_dir',root+'/build') build_dir = normalizePath(config, config.get('Main','build_dir')) # Set build directories for BEM++ and its dependencies config.set('Main','build_dir',build_dir) config.set('Bempp','build_dir',build_dir+'/bempp') config.set('Main','dependency_build_dir',build_dir+'/contrib') # Set config.set('Main','dependency_download_dir',root+'/installer/files') # Set default MKL/libs option setDefaultConfigOption(config,'MKL','lib',"-lmkl_rt") # Set default MPI options setDefaultConfigOption(config,'MPI','enable_mpi','false') setDefaultConfigOption(config,'MPI','mpi_cxx_libs','') setDefaultConfigOption(config,'MPI','mpi_include_dir','') enable_mpi = to_bool(config.get('MPI','enable_mpi')) if enable_mpi: mpi_include_dir = config.get('MPI','mpi_include_dir') cflags = config.get('Main','cflags') cxxflags = config.get('Main','cxxflags') config.set('Main','with_mpi','ON') if len(mpi_include_dir)>0: config.set('Main','cflags',cflags+" -I"+mpi_include_dir) config.set('Main','cxxflags',cxxflags+" -I"+mpi_include_dir) else: config.set('MPI','with_mpi','OFF') # Set empty BLAS/Lapack options if none exist setDefaultConfigOption(config,'BLAS','lib',"") setDefaultConfigOption(config,'LAPACK','lib',"") # Add the correct architecture parameters cflags = config.get('Main','cflags') cxxflags = config.get('Main','cxxflags') arch = config.get('Main','architecture') if not arch in ['ia32','ia64','intel64']: raise Exception("Architecture '"+arch+"' is not supported. " "Supported architectures: ia32, ia64, intel64.") if sys.platform.startswith('darwin'): if arch=='intel64': param = '-arch x86_64' else: param = '-arch i386' config.set('Main','cflags',cflags+" "+param) config.set('Main','cxxflags',cxxflags+" "+param) setDefaultConfigOption(config,'Main','optflags','-O3 -march=core2') elif sys.platform.startswith('linux'): if arch=='intel64' or arch=='ia64': param = '-m64' else: param = '-m32' config.set('Main','cflags',cflags+" "+param) config.set('Main','cxxflags',cxxflags+" "+param) setDefaultConfigOption(config,'Main','optflags','-O3 -march=native') else: raise Exception("Platform '"+sys.platform+"' is not supported") # Add the correct Python options import numpy (py_exe,py_lib,py_include) = pythonInfo(config) setDefaultConfigOption(config,'Python','exe',py_exe) setDefaultConfigOption(config,'Python','lib',py_lib) setDefaultConfigOption(config,'Python','include_dir',py_include) setDefaultConfigOption(config,'Python','numpy_include_dir',numpy.get_include()) # Check for OS X Mavericks have_mavericks = False plat = platform.system() if plat == 'Darwin': have_mavericks = True if platform.mac_ver()[0]=='10.9' else False # Add the CMake configuration if config.has_option('CMake','exe'): cmake_executable = tools.which(config.get('CMake','exe')) if cmake_executable is None: raise Exception("CMake command specified in [CMake] section not found.") tools.setDefaultConfigOption(config,'CMake','exe',cmake_executable,overwrite=True) else: # CMake must have been or will be downloaded by the bootstrap mechanism cmake_executable = prefix+'/bempp/bin/cmake' if os.path.isfile(cmake_executable): tools.setDefaultConfigOption(config,'CMake','exe',cmake_executable,overwrite=True)
", ".join(library_names) + " (particular BEM++ dependencies)") (options,args) = parser.parse_args() root=module_path() config=ConfigParser() if len(args) != 1: parser.error("Configuration file not specified") optfile = args[0] optfile_generated = root+"/"+os.path.basename(optfile)+".generated" try: optfileobj = open(optfile) config.readfp(optfileobj) optfileobj.close() optfile_full = os.path.abspath(os.path.expanduser(optfile)) tools.setDefaultConfigOption(config,'Main','optfile', optfile_full,overwrite=True) prefix = normalizePath(config, config.get('Main','prefix')) tools.setDefaultConfigOption(config,'Main','prefix',prefix, overwrite=True) except Exception, e: print ("Parsing of configuration file '" + optfile + "' failed with error message:\n" + str(e)) sys.exit(1) try: prepare(root,config) if options.resume_update: # Must be the first "if": the intention is that if this option # is present, the update procedure is resumed and all other work # modes are ignored. config = ConfigParser() if not os.path.exists(optfile_generated): print ("You must first successfully run bempp_setup.py "
def prepare(root, config): # Test whether the main options are present if not config.has_option('Main', 'prefix'): raise Exception('prefix not defined') setDefaultConfigOption(config, 'Main', 'cc', 'gcc') setDefaultConfigOption(config, 'Main', 'cxx', 'g++') setDefaultConfigOption(config, 'Main', 'architecture', 'intel64') setDefaultConfigOption(config, 'Main', 'flags', "") setDefaultConfigOption(config, 'Main', 'libs', "") setDefaultConfigOption(config, 'Main', 'cflags', "") setDefaultConfigOption(config, 'Main', 'cxxflags', "") setDefaultConfigOption(config, 'Main', 'root_dir', root) setDefaultConfigOption(config, 'Main', 'build_jobs', "1") # Retrieve path to configuration file optfile = config.get('Main', 'optfile') # Retrieve build directory setDefaultConfigOption(config, 'Main', 'build_dir', root + '/build') build_dir = normalizePath(config, config.get('Main', 'build_dir')) # Set build directories for BEM++ and its dependencies config.set('Main', 'build_dir', build_dir) config.set('Bempp', 'build_dir', build_dir + '/bempp') config.set('Main', 'dependency_build_dir', build_dir + '/contrib') # Set config.set('Main', 'dependency_download_dir', root + '/installer/files') # Set default MKL/libs option setDefaultConfigOption(config, 'MKL', 'lib', "-lmkl_rt") # Set default MPI options setDefaultConfigOption(config, 'MPI', 'enable_mpi', 'false') setDefaultConfigOption(config, 'MPI', 'mpi_cxx_libs', '') setDefaultConfigOption(config, 'MPI', 'mpi_include_dir', '') enable_mpi = to_bool(config.get('MPI', 'enable_mpi')) if enable_mpi: mpi_include_dir = config.get('MPI', 'mpi_include_dir') cflags = config.get('Main', 'cflags') cxxflags = config.get('Main', 'cxxflags') config.set('Main', 'with_mpi', 'ON') config.set('Main', 'cflags', cflags + " -I" + mpi_include_dir) config.set('Main', 'cxxflags', cxxflags + " -I" + mpi_include_dir) else: config.set('MPI', 'with_mpi', 'OFF') # Set empty BLAS/Lapack options if none exist setDefaultConfigOption(config, 'BLAS', 'lib', "") setDefaultConfigOption(config, 'LAPACK', 'lib', "") # Add the correct architecture parameters cflags = config.get('Main', 'cflags') cxxflags = config.get('Main', 'cxxflags') arch = config.get('Main', 'architecture') if not arch in ['ia32', 'ia64', 'intel64']: raise Exception("Architecture '" + arch + "' is not supported. " "Supported architectures: ia32, ia64, intel64.") if sys.platform.startswith('darwin'): if arch == 'intel64': param = '-arch x86_64' else: param = '-arch i386' config.set('Main', 'cflags', cflags + " " + param) config.set('Main', 'cxxflags', cxxflags + " " + param) setDefaultConfigOption(config, 'Main', 'optflags', '-O3 -march=core2') elif sys.platform.startswith('linux'): if arch == 'intel64' or arch == 'ia64': param = '-m64' else: param = '-m32' config.set('Main', 'cflags', cflags + " " + param) config.set('Main', 'cxxflags', cxxflags + " " + param) setDefaultConfigOption(config, 'Main', 'optflags', '-O3 -march=native') else: raise Exception("Platform '" + sys.platform + "' is not supported") # Add the correct Python options import numpy (py_exe, py_lib, py_include) = pythonInfo(config) setDefaultConfigOption(config, 'Python', 'exe', py_exe) setDefaultConfigOption(config, 'Python', 'lib', py_lib) setDefaultConfigOption(config, 'Python', 'include_dir', py_include) setDefaultConfigOption(config, 'Python', 'numpy_include_dir', numpy.get_include()) # Add the CMake configuration prefix = config.get('Main', 'prefix') setDefaultConfigOption(config, "CMake", "exe", prefix + "/bempp/bin/cmake", overwrite=True)
config = ConfigParser() if len(args) != 1: parser.error("Configuration file not specified") optfile = args[0] optfile_generated = root + "/" + os.path.basename(optfile) + ".generated" try: optfileobj = open(optfile) config.readfp(optfileobj) optfileobj.close() optfile_full = os.path.abspath(os.path.expanduser(optfile)) tools.setDefaultConfigOption(config, 'Main', 'optfile', optfile_full, overwrite=True) prefix = normalizePath(config, config.get('Main', 'prefix')) tools.setDefaultConfigOption(config, 'Main', 'prefix', prefix, overwrite=True) except Exception, e: print("Parsing of configuration file '" + optfile + "' failed with error message:\n" + str(e)) sys.exit(1) try: prepare(root, config) if options.resume_update: # Must be the first "if": the intention is that if this option # is present, the update procedure is resumed and all other work # modes are ignored.
def prepare(root,config): # Test whether the main options are present if not config.has_option('Main','prefix'): raise Exception('prefix not defined') setDefaultConfigOption(config,'Main','cc','gcc') setDefaultConfigOption(config,'Main','cxx','g++') setDefaultConfigOption(config,'Main','architecture','intel64') setDefaultConfigOption(config,'Main','flags',"") setDefaultConfigOption(config,'Main','libs',"") setDefaultConfigOption(config,'Main','cflags',"") setDefaultConfigOption(config,'Main','cxxflags',"") setDefaultConfigOption(config,'Main','root_dir',root) setDefaultConfigOption(config,'Main','build_jobs',"1") # Retrieve path to configuration file optfile = config.get('Main','optfile') # Retrieve build directory setDefaultConfigOption(config,'Main','build_dir',root+'/build') build_dir = normalizePath(config, config.get('Main','build_dir')) # Set build directories for BEM++ and its dependencies config.set('Main','build_dir',build_dir) config.set('Bempp','build_dir',build_dir+'/bempp') config.set('Main','dependency_build_dir',build_dir+'/contrib') # Set config.set('Main','dependency_download_dir',root+'/installer/files') # Set default MKL/libs option setDefaultConfigOption(config,'MKL','lib',"-lmkl_rt") # Set default MPI options setDefaultConfigOption(config,'MPI','enable_mpi','false') setDefaultConfigOption(config,'MPI','mpi_cxx_libs','') setDefaultConfigOption(config,'MPI','mpi_include_dir','') enable_mpi = to_bool(config.get('MPI','enable_mpi')) if enable_mpi: mpi_include_dir = config.get('MPI','mpi_include_dir') cflags = config.get('Main','cflags') cxxflags = config.get('Main','cxxflags') config.set('Main','with_mpi','ON') if len(mpi_include_dir)>0: config.set('Main','cflags',cflags+" -I"+mpi_include_dir) config.set('Main','cxxflags',cxxflags+" -I"+mpi_include_dir) else: config.set('MPI','with_mpi','OFF') # Set empty BLAS/Lapack options if none exist setDefaultConfigOption(config,'BLAS','lib',"") setDefaultConfigOption(config,'LAPACK','lib',"") # Add the correct architecture parameters cflags = config.get('Main','cflags') cxxflags = config.get('Main','cxxflags') arch = config.get('Main','architecture') if not arch in ['ia32','ia64','intel64']: raise Exception("Architecture '"+arch+"' is not supported. " "Supported architectures: ia32, ia64, intel64.") if sys.platform.startswith('darwin'): if arch=='intel64': param = '-arch x86_64' else: param = '-arch i386' config.set('Main','cflags',cflags+" "+param) config.set('Main','cxxflags',cxxflags+" "+param) setDefaultConfigOption(config,'Main','optflags','-O3 -march=core2') elif sys.platform.startswith('linux'): if arch=='intel64' or arch=='ia64': param = '-m64' else: param = '-m32' config.set('Main','cflags',cflags+" "+param) config.set('Main','cxxflags',cxxflags+" "+param) setDefaultConfigOption(config,'Main','optflags','-O3 -march=native') else: raise Exception("Platform '"+sys.platform+"' is not supported") # Add the correct Python options import numpy (py_exe,py_lib,py_include) = pythonInfo(config) setDefaultConfigOption(config,'Python','exe',py_exe) setDefaultConfigOption(config,'Python','lib',py_lib) setDefaultConfigOption(config,'Python','include_dir',py_include) setDefaultConfigOption(config,'Python','numpy_include_dir',numpy.get_include()) # Add the CMake configuration prefix = config.get('Main','prefix') setDefaultConfigOption(config,"CMake","exe",prefix+"/bempp/bin/cmake",overwrite=True)