def test_node_scontrol():
"""Node: Compare scontrol values to PySlurm values."""
all_node_ids = pyslurm.node().ids()
test_node = all_node_ids[-1]
test_node_info = pyslurm.node().find_id(test_node)
assert_equals(test_node, test_node_info["name"])
sctl_dict = scontrol_show('node', test_node)
assert_equals(test_node_info["alloc_mem"], int(sctl_dict["AllocMem"]))
assert_equals(test_node_info["boards"], int(sctl_dict["Boards"]))
assert_equals(test_node_info["alloc_cpus"], int(sctl_dict["CPUAlloc"]))
assert_equals(test_node_info["cpus"], int(sctl_dict["CPUTot"]))
assert_equals(test_node_info["cores"], int(sctl_dict["CoresPerSocket"]))
assert_equals(test_node_info["energy"]["current_watts"], int(sctl_dict["CurrentWatts"]))
assert_equals(test_node_info["name"], sctl_dict["NodeName"])
assert_equals(test_node_info["node_addr"], sctl_dict["NodeAddr"])
assert_equals(test_node_info["node_hostname"], sctl_dict["NodeHostName"])
assert_equals(test_node_info["partitions"], sctl_dict["Partitions"].split(","))
assert_equals(test_node_info["real_memory"], int(sctl_dict["RealMemory"]))
assert_equals(test_node_info["sockets"], int(sctl_dict["Sockets"]))
assert_equals(test_node_info["state"], sctl_dict["State"])
assert_equals(test_node_info["threads"], int(sctl_dict["ThreadsPerCore"]))
assert_equals(test_node_info["tmp_disk"], int(sctl_dict["TmpDisk"]))
assert_equals(test_node_info["weight"], int(sctl_dict["Weight"]))
def test_node_scontrol():
"""Node: Compare scontrol values to PySlurm values."""
all_node_ids = pyslurm.node().ids()
test_node = all_node_ids[-1]
test_node_info = pyslurm.node().find_id(test_node)
assert_equals(test_node, test_node_info["name"])
sctl = subprocess.Popen(["scontrol", "-d", "show", "node", test_node],
stdout=subprocess.PIPE).communicate()
sctl_stdout = sctl[0].strip().decode("UTF-8").split()
sctl_dict = dict((value.split("=")[0], value.split("=")[1])
for value in sctl_stdout)
assert_equals(test_node_info["alloc_mem"], int(sctl_dict["AllocMem"]))
assert_equals(test_node_info["boards"], int(sctl_dict["Boards"]))
assert_equals(test_node_info["alloc_cpus"], int(sctl_dict["CPUAlloc"]))
assert_equals(test_node_info["err_cpus"], int(sctl_dict["CPUErr"]))
assert_equals(test_node_info["cpus"], int(sctl_dict["CPUTot"]))
assert_equals(test_node_info["energy"]["consumed_energy"], int(sctl_dict["ConsumedJoules"]))
assert_equals(test_node_info["cores"], int(sctl_dict["CoresPerSocket"]))
assert_equals(test_node_info["energy"]["current_watts"], int(sctl_dict["CurrentWatts"]))
assert_equals(test_node_info["name"], sctl_dict["NodeName"])
assert_equals(test_node_info["node_addr"], sctl_dict["NodeAddr"])
assert_equals(test_node_info["node_hostname"], sctl_dict["NodeHostName"])
assert_equals(test_node_info["partitions"], sctl_dict["Partitions"].split(","))
assert_equals(test_node_info["real_memory"], int(sctl_dict["RealMemory"]))
assert_equals(test_node_info["sockets"], int(sctl_dict["Sockets"]))
assert_equals(test_node_info["state"], sctl_dict["State"])
assert_equals(test_node_info["threads"], int(sctl_dict["ThreadsPerCore"]))
assert_equals(test_node_info["tmp_disk"], int(sctl_dict["TmpDisk"]))
assert_equals(test_node_info["weight"], int(sctl_dict["Weight"]))
def test_node_scontrol():
"""Node: Compare scontrol values to PySlurm values."""
all_node_ids = pyslurm.node().ids()
test_node = all_node_ids[0]
test_node_info = pyslurm.node().find_id(test_node)
assert_equals(test_node, test_node_info["name"])
sctl = subprocess.Popen(["scontrol", "-d", "show", "node", test_node],
stdout=subprocess.PIPE).communicate()
sctl_stdout = sctl[0].strip().decode("UTF-8").split()
sctl_dict = dict((value.split("=")[0], value.split("=")[1])
for value in sctl_stdout)
assert_equals(test_node_info["alloc_mem"], int(sctl_dict["AllocMem"]))
assert_equals(test_node_info["boards"], int(sctl_dict["Boards"]))
assert_equals(test_node_info["alloc_cpus"], int(sctl_dict["CPUAlloc"]))
assert_equals(test_node_info["err_cpus"], int(sctl_dict["CPUErr"]))
assert_equals(test_node_info["cpus"], int(sctl_dict["CPUTot"]))
assert_equals(test_node_info["energy"]["consumed_energy"], int(sctl_dict["ConsumedJoules"]))
assert_equals(test_node_info["cores"], int(sctl_dict["CoresPerSocket"]))
assert_equals(test_node_info["energy"]["current_watts"], int(sctl_dict["CurrentWatts"]))
assert_equals(test_node_info["name"], sctl_dict["NodeName"])
assert_equals(test_node_info["node_addr"], sctl_dict["NodeAddr"])
assert_equals(test_node_info["node_hostname"], sctl_dict["NodeHostName"])
assert_equals(test_node_info["real_memory"], int(sctl_dict["RealMemory"]))
assert_equals(test_node_info["sockets"], int(sctl_dict["Sockets"]))
assert_equals(test_node_info["state"], sctl_dict["State"])
assert_equals(test_node_info["threads"], int(sctl_dict["ThreadsPerCore"]))
assert_equals(test_node_info["tmp_disk"], int(sctl_dict["TmpDisk"]))
assert_equals(test_node_info["weight"], int(sctl_dict["Weight"]))
def test_node_update():
"""Node: Test node().update()."""
node_test_before = pyslurm.node().find_id("c10")
assert_equals(node_test_before["state"], "IDLE")
node_test_update = {
"node_names": "c10",
"node_state": pyslurm.NODE_STATE_DRAIN,
"reason": "unit testing"
}
rc = pyslurm.node().update(node_test_update)
assert_equals(rc, 0)
node_test_during = pyslurm.node().find_id("c10")
assert_equals(node_test_during["state"], "IDLE+DRAIN")
node_test_update = {
"node_names": "c10",
"node_state": pyslurm.NODE_RESUME
}
rc = pyslurm.node().update(node_test_update)
assert_equals(rc, 0)
node_test_after = pyslurm.node().find_id("c10")
assert_equals(node_test_after["state"], "IDLE")
def is_node(n):
try:
pyslurm.node().find_id(n)
except IndexError:
return False
return True
def test_node_update():
"""Node: Test node().update()."""
node_test_before = pyslurm.node().find_id("c10")
assert_equals(node_test_before["state"], "IDLE")
node_test_update = {
"node_names": "c10",
"node_state": pyslurm.NODE_STATE_DRAIN,
"reason": "unit testing"
}
rc = pyslurm.node().update(node_test_update)
assert_equals(rc, 0)
node_test_during = pyslurm.node().find_id("c10")
assert_equals(node_test_during["state"], "IDLE+DRAIN")
node_test_update = {
"node_names": "c10",
"node_state": pyslurm.NODE_RESUME
}
rc = pyslurm.node().update(node_test_update)
assert_equals(rc, 0)
node_test_after = pyslurm.node().find_id("c10")
assert_equals(node_test_after["state"], "IDLE")
def test_gres_used_parser():
"""Node: Test node().parse_gres()."""
assert_equals(
pyslurm.node().parse_gres("gpu:p100:2(IDX:1,3),lscratch:0"),
["gpu:p100:2(IDX:1,3)", "lscratch:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:0,hbm:0"),
["gpu:0", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:0(IDX:N/A),hbm:0"),
["gpu:p100:0(IDX:N/A)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:1(IDX:0),hbm:0"),
["gpu:p100:1(IDX:0)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:1(IDX:1),hbm:0"),
["gpu:p100:1(IDX:1)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:2(IDX:0-1),hbm:0"),
["gpu:p100:2(IDX:0-1)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("hbm:0"),
["hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("lscratch:0,hbm:0"),
["lscratch:0", "hbm:0"]
)
def test_gres_used_parser():
"""Node: Test node().parse_gres()."""
assert_equals(
pyslurm.node().parse_gres("gpu:p100:2(IDX:1,3),lscratch:0"),
["gpu:p100:2(IDX:1,3)", "lscratch:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:0,hbm:0"),
["gpu:0", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:0(IDX:N/A),hbm:0"),
["gpu:p100:0(IDX:N/A)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:1(IDX:0),hbm:0"),
["gpu:p100:1(IDX:0)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:1(IDX:1),hbm:0"),
["gpu:p100:1(IDX:1)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("gpu:p100:2(IDX:0-1),hbm:0"),
["gpu:p100:2(IDX:0-1)", "hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("hbm:0"),
["hbm:0"]
)
assert_equals(
pyslurm.node().parse_gres("lscratch:0,hbm:0"),
["lscratch:0", "hbm:0"]
)
def get_available_nodes(self,slices_size=1):
""" Returns a list of currently available nodes by slice of slices_size
ex: for slices of size 4 ['cn[100-103]','cn[109,150-152]']
:param slices_size: slices size
:param type: int
:returns: list of nodes_id
:rtype: str """
node_list=[]
a = pyslurm.node()
node_dict = a.get()
node_count=0
nodeset = NodeSet()
if len(node_dict) > 0:
for key, value in sorted(node_dict.iteritems()):
if value['state']=='IDLE':
nodetype=value
nodeset.update(key)
node_count+=1
if node_count==slices_size:
node_list.append(str(nodeset))
nodeset=NodeSet()
slice_str=None
node_count=0
return node_list
def get_available_nodes(self, slices_size=1):
""" Returns a list of currently available nodes by slice of slices_size
ex: for slices of size 4 ['cn[100-103]','cn[109,150-152]']
:param slices_size: slices size
:param type: int
:returns: list of nodes_id
:rtype: str """
node_list = []
a = pyslurm.node()
node_dict = a.get()
node_count = 0
nodeset = NodeSet()
if len(node_dict) > 0:
for key, value in sorted(node_dict.iteritems()):
if value['state'] == 'IDLE':
nodetype = value
nodeset.update(key)
node_count += 1
if node_count == slices_size:
node_list.append(str(nodeset))
nodeset = NodeSet()
slice_str = None
node_count = 0
return node_list
def collect(self):
# Metric declarations
NODES_CPUS = GaugeMetricFamily('slurm_nodes_cpus', 'Numbers of CPUs on nodes in the cluster grouped by {}'.format(', '.join(self.labels)), labels=self.labels)
NODES_CPUS_ALLOC = GaugeMetricFamily('slurm_nodes_cpus_alloc', 'Numbers of CPUs allocated on nodes in the cluster grouped by {}'.format(', '.join(self.labels)), labels=self.labels)
NODES_CPU_LOAD = GaugeMetricFamily('slurm_nodes_cpu_load', 'CPU loads on nodes in the cluster grouped by {}'.format(', '.join(self.labels)), labels=self.labels)
NODES_MEM_TOTAL = GaugeMetricFamily('slurm_nodes_mem_total', 'Total amounts of memory available on nodes in the cluster grouped by {}'.format(', '.join(self.labels)), labels=self.labels, unit='bytes')
NODES_MEM_FREE = GaugeMetricFamily('slurm_nodes_mem_free', 'Amounts of free memory allocated on nodes in the cluster grouped by {}'.format(', '.join(self.labels)), labels=self.labels, unit='bytes')
NODES_MEM_ALLOC = GaugeMetricFamily('slurm_nodes_mem_alloc', 'Amounts of memory allocated on nodes in the cluster grouped by {}'.format(', '.join(self.labels)), labels=self.labels, unit='bytes')
# Load node info from Slurm
nodes = pyslurm.node().get()
cluster = pyslurm.config().get()['cluster_name']
for node in nodes.keys():
for partition in nodes[node]['partitions']:
labels_ = [cluster, partition] + [str(nodes[node][prop]) for prop in self.props]
if 'METRIC_VALUE_NULL' in os.environ and os.environ['METRIC_VALUE_NULL'].lower() == 'include':
NODES_CPUS.add_metric(labels_, nodes[node]['cpus'])
NODES_CPUS_ALLOC.add_metric(labels_, nodes[node]['alloc_cpus'])
NODES_CPU_LOAD.add_metric(labels_, nodes[node]['cpu_load']/100.0)
NODES_MEM_TOTAL.add_metric(labels_, nodes[node]['real_memory']*1000**2) # MB to Bytes
NODES_MEM_ALLOC.add_metric(labels_, nodes[node]['alloc_mem']*1000**2) # MB to Bytes
NODES_MEM_FREE.add_metric(labels_, nodes[node]['free_mem']*2**20) # MiB to Bytes
else:
NODES_CPUS.add_metric(labels_, nodes[node]['cpus']) if nodes[node]['cpus'] else None
NODES_CPUS_ALLOC.add_metric(labels_, nodes[node]['alloc_cpus']) if nodes[node]['alloc_cpus'] else None
NODES_CPU_LOAD.add_metric(labels_, nodes[node]['cpu_load']/100.0) if nodes[node]['cpu_load'] else None
NODES_MEM_TOTAL.add_metric(labels_, nodes[node]['real_memory']*1000**2) if nodes[node]['real_memory'] else None
NODES_MEM_ALLOC.add_metric(labels_, nodes[node]['alloc_mem']*1000**2) if nodes[node]['alloc_mem'] else None
NODES_MEM_FREE.add_metric(labels_, nodes[node]['free_mem']*2**20) if nodes[node]['free_mem'] else None
yield NODES_CPUS
yield NODES_CPUS_ALLOC
yield NODES_CPU_LOAD
yield NODES_MEM_TOTAL
yield NODES_MEM_FREE
yield NODES_MEM_ALLOC
def retrieveInfluxPoints (self):
global ignore_count
#self.pyslurmQueryTime= datetime.now().timestamp()
#pdb.set_trace()
rp_points = DDict(list) #{'autogen':[point...]}
self.nodeData = pyslurm.node().get()
#autogen.cpu_info: time, hostname, total_socket, total_thread, total_cores, cpu_model, is_vm
#hostinfo_msgs = self.consume_hostinfo_msgs()
#hostinfo = self.process_list(hostinfo_msgs, self.hostinfo2point)
#rp_points['autogen'] = hostinfo
#logger.debug("MQTTReader generate {} hostinfo points".format(len(hostinfo)))
#autogen.cpu_load: time, hostname, proc_*, load_*, cpu_*, mem_*, net_*, disk_*
hostperf_msgs = self.consume_hostperf_msgs()
hostperf = self.process_list(hostperf_msgs, self.hostperf2point)
rp_points['autogen'] = hostperf
logger.debug("MQTTReader generate {} hostperf points".format(len(hostperf)))
#autogen.cpu_proc_info, job_proc_mon
hostproc_msgs = self.consume_hostproc_msgs()
ignore_count = 0
self.process_list_add(rp_points, hostproc_msgs, self.hostproc2point)
logger.debug("MQTTReader generate {} {} points after adding hostproc, ignore {} points".format(len(rp_points['autogen']), len(rp_points['one_month']), ignore_count))
#points = hostinfo + hostperf + hostproc
if self.cpu_up_ts_count > 0:
with open (self.TS_FNAME, 'w') as f:
json.dump(self.cpu_up_ts, f)
self.cpu_up_ts_count = 0
self.node2tsPidsCache.writeFile () #save intermediate data structure, node2
return rp_points
def test_node_scontrol():
all_node_ids = pyslurm.node().ids()
test_node = all_node_ids[0]
assert type(test_node) is StringType
test_node_info = pyslurm.node().find_id(test_node)
assert test_node == test_node_info["name"]
scontrol = subprocess.Popen(["scontrol", "-d", "show", "node", test_node],
stdout=subprocess.PIPE).communicate()
scontrol_stdout = scontrol[0].strip().split()
scontrol_dict = {
value.split("=")[0]: value.split("=")[1]
for value in scontrol_stdout
}
assert test_node_info["alloc_mem"] == int(scontrol_dict["AllocMem"])
assert test_node_info["arch"] == scontrol_dict["Arch"]
assert test_node_info["boards"] == int(scontrol_dict["Boards"])
#BootTime=2016-01-12T23:56:26
assert test_node_info["alloc_cpus"] == int(scontrol_dict["CPUAlloc"])
assert test_node_info["err_cpus"] == int(scontrol_dict["CPUErr"])
assert test_node_info["cpus"] == int(scontrol_dict["CPUTot"])
#CPULoad=0.01
#CapWatts=n/a
assert test_node_info["energy"]["consumed_energy"] == int(
scontrol_dict["ConsumedJoules"])
assert test_node_info["cores"] == int(scontrol_dict["CoresPerSocket"])
assert test_node_info["energy"]["current_watts"] == int(
scontrol_dict["CurrentWatts"])
# TODO: skipping some
assert test_node_info["features"] == scontrol_dict["Features"]
assert test_node_info["free_mem"] == int(scontrol_dict["FreeMem"])
# TODO: skipping some
assert test_node_info["name"] == scontrol_dict["NodeName"]
assert test_node_info["node_addr"] == scontrol_dict["NodeAddr"]
assert test_node_info["node_hostname"] == scontrol_dict["NodeHostName"]
assert test_node_info["os"] == scontrol_dict["OS"]
assert test_node_info["real_memory"] == int(scontrol_dict["RealMemory"])
assert test_node_info["sockets"] == int(scontrol_dict["Sockets"])
assert test_node_info["state"] == scontrol_dict["State"]
assert test_node_info["threads"] == int(scontrol_dict["ThreadsPerCore"])
assert test_node_info["tmp_disk"] == int(scontrol_dict["TmpDisk"])
assert test_node_info["version"] == scontrol_dict["Version"]
assert test_node_info["weight"] == int(scontrol_dict["Weight"])
def __init__(self):
self.noFarm = ['slurmweb', 'huematrix']
self.nodeInformations = {}
self.__hosts = hostlist()
self.__node = node()
self.SearchNodes()
self.nodes = sorted(self.nodeInformations.keys())
self.state = ''
self.node = ''
def get_cluster():
nodes = pyslurm.node().get()
cluster = {}
cluster['name'] = pyslurm.config().get()['cluster_name']
cluster['nodes'] = len(nodes.keys())
cluster['cores'] = 0
for nodename, node in nodes.iteritems():
cluster['cores'] += node['cpus']
return jsonify(cluster)
def getJobAllocGPU(job, node_dict=None):
if not node_dict:
node_dict = pyslurm.node().get()
if not job['cpus_allocated']:
return None
node_list = [node_dict[node] for node in job['cpus_allocated']]
gpus_allocated = MyTool.getGPUAlloc_layout(node_list,
job['gres_detail'])
return gpus_allocated
def get(id, limit=100):
node_o = pyslurm.node()
try:
this_node = node_o.get_node(str(id))
except Exception as e:
resp = {"code": 500, "message": str(e)}
return resp, 500
if len(this_node.values()) < 1:
return NoContent, 204
return dict(this_node[str(id)]), 200
def update_nodes_from_tests(prefix,
test_type,
fail_nodes=None,
error_nodes=None,
down=False):
fail_nodes_path = os.path.join(prefix, test_type, 'fail_nodes')
try:
fail_nodes_ = set(bench.util.read_node_list(fail_nodes_path))
except IOError as ex:
logger.info('unable to read {0}'.format(fail_nodes_path))
logger.debug(ex, exc_info=True)
fail_nodes_ = set()
error_nodes_path = os.path.join(prefix, test_type, 'error_nodes')
try:
error_nodes_ = set(bench.util.read_node_list(error_nodes_path))
except IOError as ex:
logger.info('unable to read {0}'.format(error_nodes_path))
logger.debug(ex, exc_info=True)
error_nodes_ = set()
# by default, reserve fail_nodes and error_nodes
if not (fail_nodes or error_nodes):
nodes_to_update = fail_nodes_ | error_nodes_
else:
nodes_to_update = set()
if fail_nodes:
nodes_to_update |= fail_nodes_
if error_nodes:
nodes_to_update |= error_nodes_
if down:
node_state = pyslurm.NODE_STATE_DOWN
node_state_s = 'DOWN'
else:
node_state = pyslurm.NODE_STATE_DRAIN
node_state_s = 'DRAINED'
pyslurm_node = pyslurm.node()
for node in sorted(nodes_to_update):
current_node_state = pyslurm_node.find_id(node)['node_state']
if current_node_state.startswith(node_state_s):
continue
node_update = {
'node_names': node,
'node_state': node_state,
'reason': 'bench:{0}'.format(test_type),
}
rc = pyslurm_node.update(node_update)
if rc != 0:
logger.error('unable to update node {0}: {1}'.format(
node, pyslurm.slurm_strerror(pyslurm.slurm_get_errno())))
else:
logger.info('{0} set to {1}'.format(node, node_state_s))
def update_nodes_from_tests (prefix, test_type, fail_nodes=None,
error_nodes=None, down=False):
fail_nodes_path = os.path.join(prefix, test_type, 'fail_nodes')
try:
fail_nodes_ = set(bench.util.read_node_list(fail_nodes_path))
except IOError as ex:
logger.info('unable to read {0}'.format(fail_nodes_path))
logger.debug(ex, exc_info=True)
fail_nodes_ = set()
error_nodes_path = os.path.join(prefix, test_type, 'error_nodes')
try:
error_nodes_ = set(bench.util.read_node_list(error_nodes_path))
except IOError as ex:
logger.info('unable to read {0}'.format(error_nodes_path))
logger.debug(ex, exc_info=True)
error_nodes_ = set()
# by default, reserve fail_nodes and error_nodes
if not (fail_nodes or error_nodes):
nodes_to_update = fail_nodes_ | error_nodes_
else:
nodes_to_update = set()
if fail_nodes:
nodes_to_update |= fail_nodes_
if error_nodes:
nodes_to_update |= error_nodes_
if down:
node_state = pyslurm.NODE_STATE_DOWN
node_state_s = 'DOWN'
else:
node_state = pyslurm.NODE_STATE_DRAIN
node_state_s = 'DRAINED'
pyslurm_node = pyslurm.node()
for node in sorted(nodes_to_update):
current_node_state = pyslurm_node.find_id(node)['node_state']
if current_node_state.startswith(node_state_s):
continue
node_update = {
'node_names': node,
'node_state': node_state,
'reason': 'bench:{0}'.format(test_type),
}
rc = pyslurm_node.update(node_update)
if rc != 0:
logger.error('unable to update node {0}: {1}'.format(
node,
pyslurm.slurm_strerror(pyslurm.slurm_get_errno())
))
else:
logger.info('{0} set to {1}'.format(
node, node_state_s))
def get_core_counts():
data = dict()
n = pyslurm.node()
nodes = n.get()
data['total'] = [0, 0, 0]
for id, node in nodes.iteritems():
data[id] = [
node['alloc_cpus'], node['cpus'] - node['alloc_cpus'], node['cpus']
]
data['total'] = [x + y for x, y in zip(data['total'], data[id])]
return data
def run(self):
#pdb.set_trace()
while True:
curr_ts = time.time()
slurmJobs = pyslurm.job().get()
slurmNodes = pyslurm.node().get()
msgs = self.source.retrieveMsgs()
if msgs:
self.dealData(curr_ts, slurmJobs, slurmNodes, msgs)
time.sleep(self.INTERVAL)
def pre_update(self):
# Ganglia
self.ganglia_data = ganglia.Stats(do_cpus=True).all
# Slurm
self.pyslurm_node = pyslurm.node().get()
self.pyslurm_job = pyslurm.job().get()
# Influx
self.update_mem_data()
self.prune_mem_max()
def test_node_scontrol():
all_node_ids = pyslurm.node().ids()
test_node = all_node_ids[0]
assert type(test_node) is StringType
test_node_info = pyslurm.node().find_id(test_node)
assert test_node == test_node_info["name"]
scontrol = subprocess.Popen(["scontrol", "-d", "show", "node", test_node],
stdout=subprocess.PIPE).communicate()
scontrol_stdout = scontrol[0].strip().split()
scontrol_dict = {value.split("=")[0]: value.split("=")[1]
for value in scontrol_stdout}
assert test_node_info["alloc_mem"] == int(scontrol_dict["AllocMem"])
assert test_node_info["arch"] == scontrol_dict["Arch"]
assert test_node_info["boards"] == int(scontrol_dict["Boards"])
#BootTime=2016-01-12T23:56:26
assert test_node_info["alloc_cpus"] == int(scontrol_dict["CPUAlloc"])
assert test_node_info["err_cpus"] == int(scontrol_dict["CPUErr"])
assert test_node_info["cpus"] == int(scontrol_dict["CPUTot"])
#CPULoad=0.01
#CapWatts=n/a
assert test_node_info["energy"]["consumed_energy"] == int(scontrol_dict["ConsumedJoules"])
assert test_node_info["cores"] == int(scontrol_dict["CoresPerSocket"])
assert test_node_info["energy"]["current_watts"] == int(scontrol_dict["CurrentWatts"])
# TODO: skipping some
assert test_node_info["features"] == scontrol_dict["Features"]
assert test_node_info["free_mem"] == int(scontrol_dict["FreeMem"])
# TODO: skipping some
assert test_node_info["name"] == scontrol_dict["NodeName"]
assert test_node_info["node_addr"] == scontrol_dict["NodeAddr"]
assert test_node_info["node_hostname"] == scontrol_dict["NodeHostName"]
assert test_node_info["os"] == scontrol_dict["OS"]
assert test_node_info["real_memory"] == int(scontrol_dict["RealMemory"])
assert test_node_info["sockets"] == int(scontrol_dict["Sockets"])
assert test_node_info["state"] == scontrol_dict["State"]
assert test_node_info["threads"] == int(scontrol_dict["ThreadsPerCore"])
assert test_node_info["tmp_disk"] == int(scontrol_dict["TmpDisk"])
assert test_node_info["version"] == scontrol_dict["Version"]
assert test_node_info["weight"] == int(scontrol_dict["Weight"])
def sinfo():
# Partition and node lists are required
# to compute sinfo informations
partitions = pyslurm.partition().get()
nodes = pyslurm.node().get()
# Retreiving the state of each nodes
nodes_state = dict(
(node.lower(), attributes['state'].lower())
for node, attributes in nodes.iteritems()
)
# For all partitions, retrieving the states of each nodes
sinfo_data = {}
for name, attr in partitions.iteritems():
for node in list(NodeSet(attr['nodes'])):
key = (name, nodes_state[node])
if key not in sinfo_data.keys():
sinfo_data[key] = []
sinfo_data[key].append(node)
# Preparing the response
resp = []
for k, nodes in sinfo_data.iteritems():
name, state = k
partition = partitions[name]
avail = partition['state'].lower()
min_nodes = partition['min_nodes']
max_nodes = partition['max_nodes']
total_nodes = partition['total_nodes']
job_size = "{0}-{1}".format(min_nodes, max_nodes)
job_size = job_size.replace('UNLIMITED', 'infinite')
time_limit = partition['max_time_str'].replace('UNLIMITED', 'infinite')
# Creating the nodeset
nodeset = NodeSet()
map(nodeset.update, nodes)
resp.append({
'name': name,
'avail': avail,
'job_size': job_size,
'time_limit': time_limit,
'nodes': total_nodes,
'state': state,
'nodelist': str(nodeset),
})
# Jsonify can not works on list, thus using json.dumps
# And making sure headers are properly set
return make_response(json.dumps(resp), mimetype='application/json')
def sinfo():
# Partition and node lists are required
# to compute sinfo informations
partitions = get_from_cache(pyslurm.partition().get, 'get_partitions')
nodes = get_from_cache(pyslurm.node().get, 'get_nodes')
# Retreiving the state of each nodes
nodes_state = dict(
(node.lower(), attributes['state'].lower())
for node, attributes in nodes.iteritems()
)
# For all partitions, retrieving the states of each nodes
sinfo_data = {}
for name, attr in partitions.iteritems():
for node in list(NodeSet(attr['nodes'])):
key = (name, nodes_state[node])
if key not in sinfo_data.keys():
sinfo_data[key] = []
sinfo_data[key].append(node)
# Preparing the response
resp = []
for k, nodes in sinfo_data.iteritems():
name, state = k
partition = partitions[name]
avail = partition['state'].lower()
min_nodes = partition['min_nodes']
max_nodes = partition['max_nodes']
total_nodes = partition['total_nodes']
job_size = "{0}-{1}".format(min_nodes, max_nodes)
job_size = job_size.replace('UNLIMITED', 'infinite')
time_limit = partition['max_time_str'].replace('UNLIMITED', 'infinite')
# Creating the nodeset
nodeset = NodeSet()
map(nodeset.update, nodes)
resp.append({
'name': name,
'avail': avail,
'job_size': job_size,
'time_limit': time_limit,
'nodes': total_nodes,
'state': state,
'nodelist': str(nodeset),
})
# Jsonify can not works on list, thus using json.dumps
# And making sure headers are properly set
return make_response(json.dumps(resp), mimetype='application/json')
def get_cluster():
if mocking:
return mock('cluster.json')
nodes = pyslurm.node().get()
cluster = {}
cluster['name'] = pyslurm.config().get()['cluster_name']
cluster['nodes'] = len(nodes.keys())
cluster['cores'] = 0
for nodename, node in nodes.iteritems():
cluster['cores'] += node['cpus']
return cluster
def get_cluster():
if mocking:
return mock('cluster.json')
nodes = pyslurm.node().get()
cluster = {}
cluster['name'] = pyslurm.config().get()['cluster_name']
cluster['nodes'] = len(nodes.keys())
cluster['cores'] = 0
for nodename, node in nodes.iteritems():
cluster['cores'] += node['cpus']
return cluster
def test_node_update():
"""Node: Test node().update()."""
time.sleep(3)
test_node = pyslurm.node().ids()[-1]
node_test_before = pyslurm.node().find_id(test_node)
assert node_test_before["state"] == "IDLE"
node_test_update = {
"node_names": "c10",
"node_state": pyslurm.NODE_STATE_DRAIN,
"reason": "unit testing",
}
rc = pyslurm.node().update(node_test_update)
assert rc == 0
node_test_during = pyslurm.node().find_id("c10")
assert node_test_during["state"] == "IDLE+DRAIN"
node_test_update = {"node_names": "c10", "node_state": pyslurm.NODE_RESUME}
rc = pyslurm.node().update(node_test_update)
assert rc == 0
node_test_after = pyslurm.node().find_id("c10")
assert node_test_after["state"] == "IDLE"
def nodes(ids=None):
"""
Either return all nodes or a set of nodes from SLURM.
"""
nodes = pyslurm.node().get()
if ids is None:
return nodes
else:
nodes_dict = {}
if not isinstance(ids, list): ids = [ids]
for idx in ids:
nodes_dict[idx] = nodes[idx]
return nodes_dict
def search(limit=100):
nodes = []
node_o = pyslurm.node()
try:
all_nodes = node_o.get()
except Exception as e:
resp = {"code": 500, "message": str(e)}
return resp, 500
if len(all_nodes.values()) < 1:
return NoContent, 204
for node in all_nodes.values():
nodes.append(node)
return nodes[0:limit], 200
def _set_node_state(self, state, reason=None):
"""Set the node state to the provided argument."""
node_dict = {
'node_names': self.name,
'node_state': state,
}
if reason:
node_dict['reason'] = reason
rc = pyslurm.node().update(node_dict)
if rc == -1:
return False
return True
def main():
"""
Do some stuff, eventually printing output to stdout...
"""
# Parse command-line arguments
arguments = parse_arguments()
# Logging setup
if arguments.debug:
logging.basicConfig(level=logging.DEBUG)
else:
logging.basicConfig(level=logging.WARNING)
Nodes = pyslurm.node()
node_dict = Nodes.get()
Jobs = pyslurm.job()
job_dict = Jobs.get()
#print(job_dict)
if len(node_dict) > 0 and len(job_dict) > 0:
nt = get_nodetag(node_dict, job_dict, arguments)
pc = get_pending(job_dict)
if arguments.csv:
print_csv(arguments.csv_header_suppress, nt, pc)
else:
js = get_aggregated_jobs(job_dict, arguments)
print_usage(js)
else:
print "No Nodes and/or no Jobs found !"
sys.exit()
node_reservations = get_node_reservations()
jobs = get_jobs(all_jobs=arguments.all_jobs)
cred_totals, public_cores, public_nodes, public_nodes_free = get_counts(
node_reservations, jobs)
if arguments.free_cores:
print_free_cores(cred_totals, public_cores)
elif arguments.csv:
print_csv(arguments.csv_header_suppress, cred_totals, public_cores,
public_nodes, public_nodes_free)
else:
print_output(cred_totals, public_cores, public_nodes,
public_nodes_free)
def main():
"""
Do some stuff, eventually printing output to stdout...
"""
# Parse command-line arguments
arguments = parse_arguments()
# Logging setup
if arguments.debug:
logging.basicConfig(level=logging.DEBUG)
else:
logging.basicConfig(level=logging.WARNING)
Nodes = pyslurm.node()
node_dict = Nodes.get()
Jobs = pyslurm.job()
job_dict = Jobs.get()
#print(job_dict)
if len(node_dict) > 0 and len(job_dict) > 0:
nt = get_nodetag(node_dict, job_dict, arguments)
pc = get_pending(job_dict)
if arguments.csv:
print_csv(arguments.csv_header_suppress, nt, pc)
else:
js=get_aggregated_jobs(job_dict, arguments)
print_usage(js)
else:
print "No Nodes and/or no Jobs found !"
sys.exit()
node_reservations = get_node_reservations()
jobs = get_jobs(all_jobs=arguments.all_jobs)
cred_totals, public_cores, public_nodes, public_nodes_free = get_counts(node_reservations, jobs)
if arguments.free_cores:
print_free_cores(cred_totals, public_cores)
elif arguments.csv:
print_csv(arguments.csv_header_suppress, cred_totals, public_cores, public_nodes, public_nodes_free)
else:
print_output(cred_totals, public_cores, public_nodes, public_nodes_free)
def get_cluster():
nodes = pyslurm.node().get()
cluster = {}
cluster['name'] = pyslurm.config().get()['cluster_name']
cluster['nodes'] = len(nodes.keys())
cluster['cores'] = 0
for nodename, node in nodes.iteritems():
cluster['cores'] += node['cpus']
resp = jsonify({
'authentication': {
'enabled': auth_enabled,
'guest': guests_allowed
},
'data': cluster
})
return resp
def getUserAllocGPU(uid, node_dict=None):
if not node_dict:
node_dict = pyslurm.node().get()
rlt = {}
rlt_jobs = []
jobs = PyslurmQuery.getUserCurrJobs(uid)
if jobs:
for job in jobs:
job_gpus = PyslurmQuery.getJobAllocGPU(job, node_dict)
if job_gpus: # job has gpu
rlt_jobs.append(job)
for node, gpu_ids in job_gpus.items():
if node in rlt:
rlt[node].extend(gpu_ids)
else:
rlt[node] = gpu_ids
return rlt, rlt_jobs
def get_cluster():
nodes = pyslurm.node().get()
cluster = {}
cluster['name'] = pyslurm.config().get()['cluster_name']
cluster['nodes'] = len(nodes.keys())
cluster['cores'] = 0
for nodename, node in nodes.iteritems():
cluster['cores'] += node['cpus']
resp = jsonify({
'authentication': {
'enabled': auth_enabled,
'guest': guests_allowed
},
'data': cluster
})
return resp
def index_view(request):
data = pyslurm.job().get()
jobs = list(data.values())
table = QueueTable(jobs, user_logged_in=get_current_user_id(request.user))
table.order_by = '-submit_time'
stats = {}
nodes = pyslurm.node().get()
stats["cpus_util"] = nodes["gpu-server"]["alloc_cpus"] #FIXME
stats["cpus_total"] = nodes["gpu-server"]["cpus"] #FIXME
stats["ram_util"] = nodes["gpu-server"]["alloc_mem"] #FIXME
stats["ram_total"] = nodes["gpu-server"]["real_memory"] #FIXME
stats["gpus_util"] = nodes["gpu-server"]["gres_used"] #FIXME
stats["gpus_total"] = nodes["gpu-server"]["gres"] #FIXME
return render(request, 'job_submission/job_queue.html', {'table': table, 'stats': stats})
def run(self):
#pdb.set_trace()
logger.info("Start running PyslurmReader ...")
while True:
# pyslurm query
ts = int(datetime.now().timestamp())
job_dict = pyslurm.job().get()
node_dict= pyslurm.node().get()
part_dict= pyslurm.partition().get()
qos_dict = pyslurm.qos().get()
#res_dict = pyslurm.reservation().get()
res_dict = {} #TODO: pyslurm reservation coredump ERROR
#js_dict = pyslurm.jobstep().get()
#convert to points
points = []
for jid,job in job_dict.items():
self.slurmJob2point(ts, job, points)
finishJob = [jid for jid in self.sav_job_dict.keys() if jid not in job_dict.keys()]
#logger.debug ("PyslurmReader::run: Finish jobs {}".format(finishJob))
for jid in finishJob:
del self.sav_job_dict[jid]
for node in node_dict.values():
self.slurmNode2point(ts, node, points)
if json.dumps(part_dict) != json.dumps(self.sav_part_dict):
for pname, part in part_dict.items():
self.slurmPartition2point(ts, pname, part, points)
self.sav_part_dict = part_dict
if json.dumps(qos_dict) != json.dumps(self.sav_qos_dict):
for qname, qos in qos_dict.items():
self.slurmQOS2point(ts, qname, qos, points)
self.sav_qos_dict = qos_dict
if res_dict and (json.dumps(res_dict) != json.dumps(self.sav_res_dict)):
for rname, res in res_dict.items():
self.slurmReservation2point(ts, rname, res, points)
self.sav_res_dict = res_dict
with self.lock:
self.points.extend(points)
time.sleep (PyslurmReader.INTERVAL)
def get_jobs_by_nodes():
jobs = pyslurm.job().get()
nodes = pyslurm.node().get()
returned_nodes = {}
for node_id, node in nodes.iteritems():
returned_jobs = {}
# filter jobs by node
for jobid, job in jobs.iteritems():
nodes_list = job['cpus_allocated'].keys()
if node_id in nodes_list:
returned_jobs[jobid] = job
returned_nodes[node_id] = returned_jobs
return returned_nodes
def get_jobs_by_nodes():
jobs = get_from_cache(pyslurm.job().get, 'get_jobs')
nodes = get_from_cache(pyslurm.node().get, 'get_nodes')
returned_nodes = {}
for node_id, node in nodes.iteritems():
returned_jobs = {}
# filter jobs by node
for jobid, job in jobs.iteritems():
nodes_list = job['cpus_allocated'].keys()
if node_id in nodes_list:
returned_jobs[jobid] = job
returned_nodes[node_id] = filter_entities('jobs', returned_jobs)
return returned_nodes
def get_jobs_by_nodes():
jobs = pyslurm.job().get()
nodes = pyslurm.node().get()
returned_nodes = {}
for node_id, node in nodes.iteritems():
returned_jobs = {}
# filter jobs by node
for jobid, job in jobs.iteritems():
nodes_list = job['cpus_allocated'].keys()
if node_id in nodes_list:
returned_jobs[jobid] = job
returned_nodes[node_id] = returned_jobs
return returned_nodes
def display_nodes_from_github():
try:
Nodes = pyslurm.node()
node_dict = Nodes.get()
if len(node_dict) > 0:
display(node_dict)
print()
print("Node IDs - {0}".format(Nodes.ids()))
else:
print("No Nodes found !")
except ValueError as e:
print("Error - {0}".format(e.args[0]))
def test_node_count():
all_nodes = pyslurm.node().get()
all_node_ids = pyslurm.node().ids()
assert len(all_nodes) == len(all_node_ids)
def get_nodes():
if mocking:
return mock('nodes.json')
nodes = pyslurm.node().get()
return nodes
Valid States :
NODE_RESUME
NODE_STATE_DRAIN
NODE_STATE_COMPLETING
NODE_STATE_NO_RESPOND
NODE_STATE_POWER_SAVE
NODE_STATE_FAIL
NODE_STATE_POWER_UP
Some states are not valid on a Blue Gene
"""
from __future__ import print_function
import pyslurm
Node_dict = {
'node_names': 'bps000',
'node_state': pyslurm.NODE_STATE_DRAIN,
'reason': 'API test'
}
try:
a = pyslurm.node()
rc = a.update(Node_dict)
except ValueError as e:
print("Node Update error - {0}".format(e.args[0]))
else:
print("Node {0} successfully updated".format(Node_dict["node_names"]))
def test_node_ids():
"""Node: Test node().ids() return type."""
all_node_ids = pyslurm.node().ids()
assert_true(isinstance(all_node_ids, list))
def get_nodes():
nodes = pyslurm.node().get()
return nodes
def test_node_count():
"""Node: Test node count."""
all_nodes = pyslurm.node().get()
all_node_ids = pyslurm.node().ids()
assert_equals(len(all_nodes), len(all_node_ids))
print("Total Configured CPUs : {0:>8}".format(
metrics["total_cpus_config"]))
print("Cluster CPU Utilization : {0:>7}%".format(
metrics["total_cpus_alloc"] * 100 / metrics["total_cpus_avail"]))
print()
# MEMORY
print("Total Allocated Memory : {0:>8}".format(
human_readable(metrics["total_memory_alloc"] * 1024 * 1024)))
print("Total Eligible Memory : {0:>8}".format(
human_readable(metrics["total_memory_avail"] * 1024 * 1024)))
print("Total Configured Memory : {0:>8}".format(
human_readable(metrics["total_memory_config"] * 1024 * 1024)))
print("Cluster Memory Utilization : {0:>7}%".format(
metrics["total_memory_alloc"] * 100 / metrics["total_memory_avail"]))
print()
if __name__ == "__main__":
try:
# Make sure pyslurm works, or else exit here
pyslurmnode = pyslurm.node()
# Get all node info
nodes = pyslurmnode.get()
except ValueError as e:
print('Query failed - {0}').format(e)
sys.exit(1)
metrics = get_util(nodes)
display_metrics(metrics)
def get_nodes():
nodes = pyslurm.node().get()
return jsonify(nodes)
def test_node_ids():
all_node_ids = pyslurm.node().ids()
assert type(all_node_ids) is ListType
def test_node_get():
all_nodes = pyslurm.node().get()
assert type(all_nodes) is DictType
ddate = pyslurm.epoch2date(ddate)
print("\t{0:<17} : {1}".format(part_key, ddate))
elif ('reason_uid' in part_key and value['reason'] is None):
print("\t{0:<17} : ".format(part_key))
else:
print("\t{0:<17} : {1}".format(part_key, value[part_key]))
print('{0:*^80}'.format(''))
if __name__ == "__main__":
import pyslurm
try:
Nodes = pyslurm.node()
node_dict = Nodes.get()
if len(node_dict) > 0:
display(node_dict)
print()
print("Node IDs - {0}".format(Nodes.ids()))
else:
print("No Nodes found !")
except ValueError as e:
print("Error - {0}".format(e.args[0]))
def test_node_get():
"""Node: Test node().get() return type."""
all_nodes = pyslurm.node().get()
assert_true(isinstance(all_nodes, dict))