'default': True,
#'useDefault': True,
'label': 'Merge all subpopulations',
'description': '''Merge all subpopulations''',
'allowedTypes': [BooleanType],
},
{
'longarg': 'filename=',
'label': 'Filename to save population',
'default': 'init.pop',
'useDefault': False,
'description': '''Name of the population or an absolute path to
a file. This parameter will be ignored if an empty string or None
is given.''',
'allowedTypes': [StringType],
'validate': simuOpt.valueNotEqual('')
}
]
if __name__ == '__main__':
import logging
logging.basicConfig(level=logging.DEBUG)
logger = logging.getLogger()
pars = simuOpt.Params(options,
'This script chooses specified markers from one or more HapMap\n'
'populations and saves them in simuPOP format.\n',
__doc__)
if not pars.getParam():
sys.exit(1)
names = []
if pars.markerList != '':
