def op_command(ip, command, username, password, port=22):
""" Purpose: For the -c flag, this function is called. It will connect to a device, run the single specified command, and return the output.
Paramiko is used instead of ncclient so we can pipe the command output just like on the CLI.
Parameters:
ip - String containing the IP of the remote device, used for logging purposes.
host_name - The device host-name for output purposes.
commands - String containing the command to be sent to the device.
username - Username used to log into the device
password - Password is needed because we are using paramiko for this.
"""
ssh = paramiko.SSHClient()
ssh.set_missing_host_key_policy(paramiko.AutoAddPolicy())
device = ' -> Command: %s\n' % (command)
command = command.strip() + ' | no-more\n'
output = ''
try:
ssh.connect(ip, port=port, username=username, password=password)
stdin, stdout, stderr = ssh.exec_command(command=command, timeout=900)
stdin.close()
# read normal output
while not stdout.channel.exit_status_ready():
output += stdout.read()
stdout.close()
# read errors
while not stderr.channel.exit_status_ready():
output += stderr.read()
stderr.close()
output = '%s\n%s' % (device, output)
return output
except paramiko.AuthenticationException:
output = '*' * 45 + '\n\nBad username or password for device: %s\n' % ip
return output
def inetd_sockets(max_socks):
"""
"""
sock = fromfd(stdin.fileno())
stdin.close()
stdout.close()
stderr.close()
return sock
def return_response(self):
""" Return request result back to SwiftHLM Proxy Middleware (STATUS)
or to Asynchronous Distributor (MIGRATION or RECAL) """
self.logger.debug('Return response to Dispatcher')
self.logger.debug("Response: %s", json.dumps(self.response_out))
stdout.write(json.dumps(self.response_out))
stdout.flush()
stdout.close()
self.logger.debug('Exiting Handler')
def write(data, filename=None):
"""Write data to file if filename is given, to stdout otherwise"""
if filename is not None:
output = open(filename, "w")
else:
from sys import stdout as output
output.write(result)
if filename is not None:
output.close()
def main():
line = stdin.readline()
while (len(line) != 0):
queries = [int(x) for x in line.split()]
for v in queries:
stdout.write(str(ans(v)))
stdout.write("\n")
line = stdin.readline()
stdout.close()
stdin.close()
def main(*test_args):
args = parse_args()
stats = StatsGithub(args.repo['owner'],
args.repo['name'],
args.branch,
since=args.since,
until=args.until,
token=args.token)
parameters = [
f"{'Repository:':<32}\n", f"{'- host':<32} {args.repo['host']}\n",
f"{'- owner':<32} {args.repo['owner']}\n",
f"{'- name':<32} {args.repo['name']}\n",
f"{'- branch':<32} {args.branch}\n"
]
if args.since or args.until:
parameters.append(f"{'Period:':<32}\n")
if args.since:
parameters.append(
f"{'- since:':<32} {args.since.strftime('%Y-%m-%d')}\n")
if args.until:
parameters.append(
f"{'- until:':<32} {args.until.strftime('%Y-%m-%d')}\n")
stdout.writelines(parameters)
try:
opened, closed, oldest = stats.issues()
stdout.writelines([
f"{'Issues:':<32}\n", f"{'- opened':<32} {opened}\n",
f"{'- closed':<32} {closed}\n", f"{'- oldest':<32} {oldest}\n"
])
opened, closed, oldest = stats.pull_requests()
stdout.writelines([
f"{'Pull requests:':<32}\n", f"{'- opened':<32} {opened}\n",
f"{'- closed':<32} {closed}\n", f"{'- oldest':<32} {oldest}\n"
])
contributions = stats.contributions()
lines = [f"{'Contributors:':<32}\n"]
if contributions:
for username, commits in contributions:
lines.append(f"{'- ' + username:<32} {commits:<8}\n")
stdout.writelines(lines)
stdout.close()
except RateLimitExceededException:
err = "Количество неавторизованных запросов к GitHub API исчерпано. "
if not args.token:
err += "Для увеличения лимита авторизуйтесь с помощью токена."
stderr.write(err)
def main():
global stdin, stdout
cond = type(stdin) == str and type(stdin) == str
if cond: # use file instead of standard
stdin = open(stdin, "rt")
stdout = open(stdout, "wt")
if METHO == 1: # method
func1()
else:
func2()
stdin.close()
stdout.close()
def main():
T = int(stdin.readline())
case = 1
while T > 0:
arr = [int(x) for x in stdin.readline().split()]
arr = sorted(arr)
stdout.write("Case " + str(case) + ": " + str(arr[1]) + "\n")
case += 1
T -= 1
stdout.close()
def main():
T = int(stdin.readline())
while T > 0:
word = stdin.readline().strip()
if len(word) == 5:
stdout.write("3\n")
else:
if ('o' in word and 'n' in word) or ('o' in word and 'e' in word) or ('n' in word and 'e' in word):
stdout.write("1\n")
else:
stdout.write("2\n")
T -= 1
stdout.close()
def main():
global ELEMS, ACUMS, ANS, N, KEYS
setrecursionlimit(50000)
line = stdin.readline()
while len(line) != 0:
ELEMS = [0 for i in range(20)]
ACUMS = [0 for i in range(20)]
ANS = list()
KEYS = {}
N = 0
elems = [int(x) for x in line.split()]
t = elems[0]
N = elems[1]
if N == 0:
break
for i in range(0, N):
ELEMS[i] = elems[i + 2]
for i in range(N - 1, -1, -1):
if i + 1 == N:
ACUMS[i] = ELEMS[i]
else:
ACUMS[i] = ELEMS[i] + ACUMS[i + 1]
writer.write("Sums of " + str(t) + ":\n")
solve(0, "", t)
if len(ANS) > 0:
for s in ANS:
writer.write(s + "\n")
else:
writer.write("NONE\n")
ANS = list()
KEYS = {}
line = stdin.readline()
stdin.close()
writer.close()
def main():
line = stdin.readline()
while (len(line) != 0):
n, w, d, wscoins = [int(x) for x in line.split()]
# n * (n + 1) / 2
summ = w * ((n - 1) * (n) / 2)
# Esto deberia ser cierto si esta la basket en el N
# Pero curiosamente en el input no es asi, esta malo..
if summ == wscoins:
stdout.write(str(n) + "\n")
else:
lo = 1
hi = n
found = False
while lo + 1 != hi:
mid = (lo + hi) >> 1
tmp = summ - (mid * w) + mid * (w - d)
if tmp < wscoins:
hi = mid
elif tmp > wscoins:
lo = mid
else:
stdout.write(str(mid) + "\n")
found = True
break
# Ojo en Busqueda binaria siempre probar con lo al final
# Porque lo al final no se computa
if not found:
# Pruebe con el mismo lo, ya que que si lo + 1 == hi falta probar el mismo lo
tmp = summ - (lo * w) + lo * (w - d)
if tmp == wscoins:
stdout.write(str(lo) + "\n")
else:
# Si no, es n el resultado final
stdout.write(str(n) + "\n")
line = stdin.readline()
stdout.close()
stdin.close()
def wrapper(*args, **kwargs):
try:
return f(*args, **kwargs)
except SystemExit:
raise
except:
print_exc()
exit(1)
finally:
try:
stdout.flush()
finally:
try:
stdout.close()
finally:
try:
stderr.flush()
finally:
stderr.close()
def wrapper(*args, **kwargs):
try:
return f(*args, **kwargs)
except SystemExit:
raise
except:
print_exc()
exit(1)
finally:
try:
stdout.flush()
finally:
try:
stdout.close()
finally:
try:
stderr.flush()
finally:
stderr.close()
def main():
global G, S, P, C, TOTAL_COMPONENTS, PREORDER
sys.setrecursionlimit(50000)
line = stdin.readline()
while (len(line) != 0):
N, M = [int(x) for x in line.split()]
TOTAL_COMPONENTS = 0
for i in range(1, N + 1):
G[i] = list()
PREORDER[i] = -1
for i in range(M):
line = stdin.readline().split()
if line[0] == "1":
u = int(line[1])
v = int(line[2])
G[u].append(v)
else:
k = int(line[0])
for i in range(1, k):
u = int(line[i])
v = int(line[i + 1])
G[u].append(v)
G[v].append(u)
for i in range(1, N + 1):
if PREORDER[i] == -1:
gabow(i)
# If there are more than 1 components then clearly the graph is not strongly connected
if TOTAL_COMPONENTS != 1:
stdout.write("NO\n")
else:
stdout.write("YES\n")
line = stdin.readline()
stdout.close()
def main():
line = stdin.readline()
while (len(line) != 0):
R, C = [int(x) for x in line.split()]
A = [0 for i in range((R * C))]
offset = 0
rowIdx = 0
for i in range(R):
line = stdin.readline().split()
for e in line:
x = int(e)
if x == R * C:
rowIdx = (i + 1)
A[offset] = float('inf')
else:
A[offset] = x
offset += 1
count = 0
for i in range(len(A)):
# Empty square
if A[i] == float('inf'):
continue
for j in range(i + 1, len(A)):
# Notice nothing is greater than inf so it wont do anything harmful
if A[i] > A[j]:
count += 1
tot = count + rowIdx
if tot % 2 == 0:
stdout.write("Y\n")
else:
stdout.write("N\n")
line = stdin.readline()
stdout.close()
stdin.close()
def evol_search(query, **kwargs):
import prody
from os.path import join, split
pfam_results = prody.searchPfam(query, **kwargs)
if pfam_results is None:
return
outname = kwargs.get('outname', None)
delimiter = kwargs.get('delimiter', '\t')
if outname:
folder, outname = split(outname)
filepath = join(prody.utilities.makePath(folder), outname)
out = open(filepath, 'wb')
else:
from sys import stdout as out
title = delimiter.join(['acc', 'id', 'type', 'e-value']) + '\n'
out.write(title)
for key in pfam_results:
val = pfam_results[key]
evalue = ''
for i, location in enumerate(val.get('locations', [])):
temp = location.get('evalue', None)
if temp:
if i == 0:
evalue = float(temp)
else:
if float(temp) < evalue:
evalue = float(temp)
output = delimiter.join([
val.get('accession', ' '),
val.get('id', ' '),
val.get('type', ' '),
str(evalue)
]) + '\n'
out.write(output)
if outname:
prody.LOGGER.info('Search results written in {0}.'.format(filepath))
out.close()
def main():
text = stdin.readline().strip()
case = 1
while text != "#":
language = "UNKNOWN"
if text == "HELLO":
language = "ENGLISH"
elif text == "HOLA":
language = "SPANISH"
elif text == "HALLO":
language = "GERMAN"
elif text == "BONJOUR":
language = "FRENCH"
elif text == "CIAO":
language = "ITALIAN"
elif text == "ZDRAVSTVUJTE":
language = "RUSSIAN"
stdout.write("Case " + str(case) + ": " + language + "\n")
case += 1
text = stdin.readline().strip()
stdout.close()
def evol_search(query, **kwargs):
import prody
from os.path import join, split
pfam_results = prody.searchPfam(query, **kwargs)
if pfam_results is None:
return
outname = kwargs.get('outname', None)
delimiter = kwargs.get('delimiter', '\t')
if outname:
folder, outname = split(outname)
filepath = join(prody.utilities.makePath(folder), outname)
out = open(filepath, 'wb')
else:
from sys import stdout as out
title = delimiter.join(['acc', 'id', 'type', 'e-value']) + '\n'
out.write(title)
for key in pfam_results:
val = pfam_results[key]
evalue = ''
for i, location in enumerate(val.get('locations', [])):
temp = location.get('evalue', None)
if temp:
if i==0:
evalue = float(temp)
else:
if float(temp) < evalue:
evalue = float(temp)
output = delimiter.join([val.get('accession', ' '),
val.get('id', ' '),
val.get('type', ' '),
str(evalue)]) + '\n'
out.write(output)
if outname:
prody.LOGGER.info('Search results written in {0}.'.format(filepath))
out.close()
def evol_search(query, **kwargs):
import prody
from os.path import join, split
pfam_results = prody.searchPfam(query, **kwargs)
if pfam_results is None:
return
outname = kwargs.get("outname", None)
delimiter = kwargs.get("delimiter", "\t")
if outname:
folder, outname = split(outname)
filepath = join(prody.utilities.makePath(folder), outname)
out = open(filepath, "wb")
else:
from sys import stdout as out
title = delimiter.join(["acc", "id", "type", "e-value"]) + "\n"
out.write(title)
for key in pfam_results:
val = pfam_results[key]
evalue = ""
for i, location in enumerate(val.get("locations", [])):
temp = location.get("evalue", None)
if temp:
if i == 0:
evalue = float(temp)
else:
if float(temp) < evalue:
evalue = float(temp)
output = (
delimiter.join([val.get("accession", " "), val.get("id", " "), val.get("type", " "), str(evalue)])
+ "\n"
)
out.write(output)
if outname:
prody.LOGGER.info("Search results written in {0}.".format(filepath))
out.close()
from sys import argv, stdout, stdin, stderr
import theano
import time
from ape.timings.computation.run import debugprint, collect_inputs, comptime_run
mode = theano.compile.mode.get_default_mode()
mode = mode.excluding('gpu')
def time_computation(inputs, outputs, numeric_inputs, niter):
f = theano.function(inputs, outputs, mode=mode)
starttime = time.time()
debugprint("Computing")
for n in xrange(niter):
outputs = f(*numeric_inputs)
endtime = time.time()
duration = endtime - starttime
return duration / niter
if __name__ == '__main__':
known_shapes, niter, fgraphs = collect_inputs(argv, stdin)
results = comptime_run(known_shapes, niter, fgraphs, time_computation)
stdout.write(str(results))
stdout.close()
num_to_name = {p[0]: p[1] for p in people}
for p in people:
output_lines.append("NODE\t%s\t%s" % (p[1], ','.join(p[2:])))
# parse contacts
if args.contacts.lower().endswith('.gz'):
lines = gopen(args.contacts).read().decode().splitlines()
else:
lines = open(args.contacts).readlines()
for l in lines:
if l[0] == '\t':
continue
s, e, u, v = [x.strip() for x in l.split('\t')[1:5]]
output_lines.append("EDGE\t%s\t%s\t%s,%s\tu" %
(num_to_name[u], num_to_name[v], s, e))
# write to output
if args.output.lower().endswith('.gz'):
f = gopen(args.output, 'wb', 9)
f.write('\n'.join(output_lines).encode())
f.write(b'\n')
f.close()
else:
if args.output.lower() == 'stdout':
from sys import stdout as f
else:
f = open(args.output, 'w')
f.write('\n'.join(output_lines))
f.write('\n')
f.close()
stdin = open('A-large-practice.in', 'r')
#stdout = open('A-small.out', 'w')
stdout = open('A-large.out', 'w')
T = int(stdin.readline().strip())
for t in range(0, T):
(A, N) = [int(x) for x in stdin.readline().strip().split()]
m = [int(x) for x in stdin.readline().strip().split()]
ans = N
op = 0
m.sort()
while A > 1 and len(m) > 0:
while A <= m[0]:
A += A - 1
op += 1
A += m[0]
m[0:1] = []
ans = min(ans, op + len(m))
stdout.write('Case #{0}: {1}\n'.format(t+1, ans))
stdin.close()
stdout.close()
def enablePrint() -> None:
global stdout
stdout.close()
stdout = __stdout__
help="Output File (FASTA format)")
args = parser.parse_args()
if args.input == 'stdin':
from sys import stdin as infile
else:
infile = open(args.input)
if args.output == 'stdout':
from sys import stdout as outfile
else:
outfile = open(args.output, 'w')
# create mask regions
mask = False
for line in infile:
chrom, pos, depth = line.strip().split('\t')
chrom = chrom.strip()
pos = int(pos)
depth = int(depth)
if depth < args.min_depth:
if not mask: # starting a mask region
mask = True
outfile.write('%s\t%d\t' % (chrom, pos))
else:
if mask: # ending a mask region
mask = False
outfile.write('%d\n' % (pos - 1))
if mask: # close trailing mask region
mask = False
outfile.write('%d\n' % pos)
outfile.close()
