def main(): # Reading Harts Essential Genes if not os.path.isfile('./pickled/essential_nonessential_genes.p'): rd.ReadEssential_NonEssential_Genes() print('Finished Reading Harts Essentiality Genes') essential_genes, nonessential_genes = pickle.load( open("./pickled/essential_nonessential_genes.p", "rb")) if not os.path.isfile('./input/GBM-lib1_l2fc.csv'): rd.ProcessTKODataForDESEQ() # RunAlgorithms('Simulation', 'All') # rd.ProcessTKODataForDESEQ() with open(ff_name, "a") as ff: print('#################################', file=ff) filenames = [ 'HCT116_1-lib1', 'HCT116_2-lib1', 'DLD1-lib1', 'HeLa-lib1', 'RPE1-lib1', 'GBM-lib1' ] # RunAlgorithms(filenames[1], 'All') for i in range(len(filenames)): with open(ff_name, "a") as ff: print(filenames[i], file=ff) RunAlgorithms(filenames[i], 'All') return ()