def calculateGCContent(infiles, outfile):
'''
calculate the GC content across foreground and
background sets
'''
PipelineTransfacMatch.calculateCpGComposition(
infiles[0], infiles[1], outfile)
def calculateGCContent(infiles, outfile):
'''
calculate the GC content across foreground and
background sets
'''
PipelineTransfacMatch.calculateCpGComposition(infiles[0], infiles[1],
outfile)
def calculateCpGcomposition(infiles, outfile):
'''
calculate the GC content for the CpG matched data
Should be the same as the CpG content of the foreground
set
'''
PipelineTransfacMatch.calculateCpGComposition(infiles[0], infiles[1], outfile)
def calculateCpGcomposition(infiles, outfile):
'''
calculate the GC content for the CpG matched data
Should be the same as the CpG content of the foreground
set
'''
PipelineTransfacMatch.calculateCpGComposition(infiles[0], infiles[1],
outfile)