#name_path = sys.argv[2]
#read nodes
(nodes, taxes_ids) = read_nodes()
#get nodes by input rank
filtered_nodes_dic = filter_by_rank(nodes, taxes_ids, rank)
filtered_nodes_dic = nodes
#group id
#nodes_dic[group_id].rank
#for each node find its lineage
find_lineages(filtered_nodes_dic, taxes_ids)
lineages = []
for id, node in nodes.items():
lineages.append(node.lineage)
#print (str(node))
tree = csv_to_weightless_newick(lineages)
t = Tree(tree + ";", format=8)
print(t)
for node in t.traverse("postorder"):
print(node.name)
print(t.get_node_by_name("12"))
