def run_unafold_bad_permissions_test():
# If we do not have permissions to write to the UNAfold
# directory, we need to trhow a runtimeError
temp_dir = tempfile.mkdtemp()
subprocess.call(["chmod", "a-w", temp_dir])
try:
weboutput.run_unafold(temp_dir, "ATTA")
finally:
shutil.rmtree(temp_dir)
def run_unafold_missing_binary_test():
# Verify that we throw a runtime error if unafold.pl
# binary is missing.
bad_command = "/tmp/does_not_exist"
temp_dir = tempfile.mkdtemp()
try:
weboutput.run_unafold(os.path.join("/tmp", "ATTAA"), "ATTAA", bad_command )
finally:
shutil.rmtree(temp_dir)
def run_unafold_missing_unafolddir_test():
# If we call unafold and temp_directory
# does not exist, then it should throw a
# RuntimeError
temp_dir = "/tmp/does_not_exist"
weboutput.run_unafold(temp_dir, "ATATA")
