def conn(self):
"""Return a new user in a read-annotate group."""
group = self.new_group(perms='rwra--')
user = self.new_client_and_user(group=group)
gateway = BlitzGateway(client_obj=user[0])
# Refresh the session context
gateway.getEventContext()
return gateway
def get_connection(user, group_id=None):
"""Get a BlitzGateway connection for the given user's client."""
connection = BlitzGateway(client_obj=user[0])
# Refresh the session context
connection.getEventContext()
if group_id is not None:
connection.SERVICE_OPTS.setOmeroGroup(group_id)
return connection
print " Full Name:", user.getFullName()
print "Member of:"
for g in conn.getGroupsMemberOf():
print " ID:", g.getName(), " Name:", g.getId()
group = conn.getGroupFromContext()
print "Current group: ", group.getName()
print "Other Members of current group:"
for exp in conn.listColleagues():
print " ID:", exp.getId(), exp.getOmeName(), " Name:", exp.getFullName()
print "Owner of:"
for g in conn.listOwnedGroups():
print " ID:", g.getName(), " Name:", g.getId()
# New in OMERO 5
print "Admins:"
for exp in conn.getAdministrators():
print " ID:", exp.getId(), exp.getOmeName(), " Name:", exp.getFullName()
# The 'context' of our current session
ctx = conn.getEventContext()
# print ctx # for more info
# Close connection:
# =================================================================
# When you are done, close the session to free up server resources.
conn._closeSession()
user = conn.getUser()
print "Current user:"******" ID:", user.getId()
print " Username:"******" Full Name:", user.getFullName()
print "Member of:"
for g in conn.getGroupsMemberOf():
print " ID:", g.getName(), " Name:", g.getId()
group = conn.getGroupFromContext()
print "Current group: ", group.getName()
print "Other Members of current group:"
for exp in conn.listColleagues():
print " ID:", exp.getId(), exp.getOmeName(
), " Name:", exp.getFullName()
print "Owner of:"
for g in conn.listOwnedGroups():
print " ID:", g.getName(), " Name:", g.getId()
# The 'context' of our current session
ctx = conn.getEventContext()
# print ctx # for more info
# Close connection:
# =================================================================
# When you're done, close the session to free up server resources.
conn._closeSession()
print("""%s%s:%s Name:"%s" (owner=%s)""" %
(" " * indent, obj.OMERO_CLASS, obj.getId(), obj.getName(),
obj.getOwnerOmeName()))
# List all Projects owned by the user currently logged in
# =======================================================
# By default this returns Projects from all owners across
# all groups. We can filter by group and owner using the
# optional opts dict (new in 5.3.0)
# We also order by name and use 'limit' and 'offset',
# to load the first 5 Projects
print("\nList Projects:")
print("=" * 50)
my_exp_id = conn.getUser().getId()
default_group_id = conn.getEventContext().groupId
for project in conn.getObjects("Project",
opts={
'owner': my_exp_id,
'group': default_group_id,
'order_by': 'lower(obj.name)',
'limit': 5,
'offset': 0
}):
print_obj(project)
assert project.getDetails().getOwner().id == my_exp_id
# We can get Datasets with listChildren, since we have the Project already.
# Or conn.getObjects("Dataset", opts={'project', id}) if we have Project ID
for dataset in project.listChildren():
print_obj(dataset, 2)
for image in dataset.listChildren():
