def misc_operator_with_arrays_and_products_factory(n):
if n == 0:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 10, 4, 3, n)
op = ComponentProjection(np.random.randint(0, 100, 10), U.space)
return op, _, U, V, sp, rp
elif n == 1:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 0, 4, 3, n)
op = ComponentProjection([], U.space)
return op, _, U, V, sp, rp
elif n == 2:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 3, 4, 3, n)
op = ComponentProjection([3, 3, 3], U.space)
return op, _, U, V, sp, rp
elif n == 3:
from pymor.operators.constructions import AdjointOperator
op, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 20, 4, 3, n)
op = AdjointOperator(op, with_apply_inverse=True)
return op, _, V, U, rp, sp
elif n == 4:
from pymor.operators.constructions import AdjointOperator
op, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 20, 4, 3, n)
op = AdjointOperator(op, with_apply_inverse=False)
return op, _, V, U, rp, sp
elif 5 <= n <= 7:
from pymor.operators.constructions import SelectionOperator
from pymor.parameters.functionals import ProjectionParameterFunctional
op0, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(30, 30, 4, 3, n)
op1 = NumpyMatrixOperator(np.random.random((30, 30)))
op2 = NumpyMatrixOperator(np.random.random((30, 30)))
op = SelectionOperator([op0, op1, op2], ProjectionParameterFunctional('x', ()), [0.3, 0.6])
return op, op.parse_parameter((n-5)/2), V, U, rp, sp
elif n == 8:
from pymor.operators.block import BlockDiagonalOperator
op0, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(20, 20, 4, 3, n+1)
op2, _, U2, V2, sp2, rp2 = numpy_matrix_operator_with_arrays_and_products_factory(30, 30, 4, 3, n+2)
op = BlockDiagonalOperator([op0, op1, op2])
sp = BlockDiagonalOperator([sp0, sp1, sp2])
rp = BlockDiagonalOperator([rp0, rp1, rp2])
U = op.source.make_array([U0, U1, U2])
V = op.range.make_array([V0, V1, V2])
return op, _, U, V, sp, rp
elif n == 9:
from pymor.operators.block import BlockDiagonalOperator, BlockOperator
op0, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(20, 20, 4, 3, n+1)
op2, _, U2, V2, sp2, rp2 = numpy_matrix_operator_with_arrays_and_products_factory(20, 10, 4, 3, n+2)
op = BlockOperator([[op0, op2],
[None, op1]])
sp = BlockDiagonalOperator([sp0, sp1])
rp = BlockDiagonalOperator([rp0, rp1])
U = op.source.make_array([U0, U1])
V = op.range.make_array([V0, V1])
return op, None, U, V, sp, rp
else:
assert False
def jacobian(self, U, mu=None):
mu = self.parse_parameter(mu)
if len(self.interpolation_dofs) == 0:
if self.source.type == self.range.type == NumpyVectorArray:
return NumpyMatrixOperator(np.zeros((0, self.source.dim)), name=self.name + '_jacobian')
else:
return ZeroOperator(self.source, self.range, name=self.name + '_jacobian')
elif hasattr(self, 'operator'):
return EmpiricalInterpolatedOperator(self.operator.jacobian(U, mu=mu), self.interpolation_dofs,
self.collateral_basis, self.triangular, self.name + '_jacobian')
else:
U_components = NumpyVectorArray(U.components(self.source_dofs), copy=False)
JU = self.restricted_operator.jacobian(U_components, mu=mu) \
.apply(NumpyVectorArray(np.eye(len(self.source_dofs)), copy=False))
try:
if self.triangular:
interpolation_coefficients = solve_triangular(self.interpolation_matrix, JU.data.T,
lower=True, unit_diagonal=True).T
else:
interpolation_coefficients = np.linalg.solve(self.interpolation_matrix, JU._array.T).T
except ValueError: # this exception occurs when AU contains NaNs ...
interpolation_coefficients = np.empty((len(JU), len(self.collateral_basis))) + np.nan
J = self.collateral_basis.lincomb(interpolation_coefficients)
if isinstance(J, NumpyVectorArray):
J = NumpyMatrixOperator(J.data.T)
else:
J = VectorArrayOperator(J, copy=False)
return Concatenation(J, ComponentProjection(self.source_dofs, self.source), name=self.name + '_jacobian')
def jacobian(self, U, mu=None):
mu = self.parse_parameter(mu)
options = self.solver_options.get('jacobian') if self.solver_options else None
if len(self.interpolation_dofs) == 0:
if isinstance(self.source, NumpyVectorSpace) and isinstance(self.range, NumpyVectorSpace):
return NumpyMatrixOperator(np.zeros((self.range.dim, self.source.dim)), solver_options=options,
source_id=self.source.id, range_id=self.range.id,
name=self.name + '_jacobian')
else:
return ZeroOperator(self.range, self.source, name=self.name + '_jacobian')
elif hasattr(self, 'operator'):
return EmpiricalInterpolatedOperator(self.operator.jacobian(U, mu=mu), self.interpolation_dofs,
self.collateral_basis, self.triangular,
solver_options=options, name=self.name + '_jacobian')
else:
restricted_source = self.restricted_operator.source
U_dofs = restricted_source.make_array(U.dofs(self.source_dofs))
JU = self.restricted_operator.jacobian(U_dofs, mu=mu) \
.apply(restricted_source.make_array(np.eye(len(self.source_dofs))))
try:
if self.triangular:
interpolation_coefficients = solve_triangular(self.interpolation_matrix, JU.to_numpy().T,
lower=True, unit_diagonal=True).T
else:
interpolation_coefficients = solve(self.interpolation_matrix, JU.to_numpy().T).T
except ValueError: # this exception occurs when AU contains NaNs ...
interpolation_coefficients = np.empty((len(JU), len(self.collateral_basis))) + np.nan
J = self.collateral_basis.lincomb(interpolation_coefficients)
if isinstance(J.space, NumpyVectorSpace):
J = NumpyMatrixOperator(J.to_numpy().T, range_id=self.range.id)
else:
J = VectorArrayOperator(J)
return Concatenation([J, ComponentProjection(self.source_dofs, self.source)],
solver_options=options, name=self.name + '_jacobian')
def test_to_matrix_ComponentProjection():
dofs = np.array([0, 1, 2, 4, 8])
n = 10
A = np.zeros((len(dofs), n))
A[range(len(dofs)), dofs] = 1
source = NumpyVectorSpace(n)
Aop = ComponentProjection(dofs, source)
assert_type_and_allclose(A, Aop, 'sparse')
def restricted(self, dofs):
source_dofs = np.setdiff1d(np.union1d(self.grid.neighbours(0, 0)[dofs].ravel(), dofs),
np.array([-1], dtype=np.int32),
assume_unique=True)
sub_grid = SubGrid(self.grid, entities=source_dofs)
sub_boundary_info = SubGridBoundaryInfo(sub_grid, self.grid, self.boundary_info)
op = self.with_(grid=sub_grid, boundary_info=sub_boundary_info, name='{}_restricted'.format(self.name))
sub_grid_indices = sub_grid.indices_from_parent_indices(dofs, codim=0)
proj = ComponentProjection(sub_grid_indices, op.range)
return Concatenation(proj, op), sub_grid.parent_indices(0)
def restricted(self, dofs):
source_dofs = np.setdiff1d(np.union1d(self.grid.neighbours(0, 0)[dofs].ravel(), dofs),
np.array([-1], dtype=np.int32),
assume_unique=True)
sub_grid = SubGrid(self.grid, source_dofs)
sub_boundary_info = make_sub_grid_boundary_info(sub_grid, self.grid, self.boundary_info)
op = self.with_(grid=sub_grid, boundary_info=sub_boundary_info, space_id=None,
name=f'{self.name}_restricted')
sub_grid_indices = sub_grid.indices_from_parent_indices(dofs, codim=0)
proj = ComponentProjection(sub_grid_indices, op.range)
return proj @ op, sub_grid.parent_indices(0)
def misc_operator_with_arrays_and_products_factory(n):
if n == 0:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(
100, 10, 4, 3, n)
op = ComponentProjection(np.random.randint(0, 100, 10), U.space)
return op, _, U, V, sp, rp
elif n == 1:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(
100, 0, 4, 3, n)
op = ComponentProjection([], U.space)
return op, _, U, V, sp, rp
elif n == 2:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(
100, 3, 4, 3, n)
op = ComponentProjection([3, 3, 3], U.space)
return op, _, U, V, sp, rp
elif n == 3:
from pymor.operators.constructions import AdjointOperator
op, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(
100, 20, 4, 3, n)
op = AdjointOperator(op, with_apply_inverse=True)
return op, _, V, U, rp, sp
elif n == 4:
from pymor.operators.constructions import AdjointOperator
op, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(
100, 20, 4, 3, n)
op = AdjointOperator(op, with_apply_inverse=False)
return op, _, V, U, rp, sp
elif 5 <= n <= 7:
from pymor.operators.constructions import SelectionOperator
from pymor.parameters.functionals import ProjectionParameterFunctional
op0, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(
30, 30, 4, 3, n)
op1 = NumpyMatrixOperator(np.random.random((30, 30)))
op2 = NumpyMatrixOperator(np.random.random((30, 30)))
op = SelectionOperator([op0, op1, op2],
ProjectionParameterFunctional('x'), [0.3, 0.6])
return op, op.parameters.parse((n - 5) / 2), V, U, rp, sp
elif n == 8:
from pymor.operators.block import BlockDiagonalOperator
op0, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(
10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(
20, 20, 4, 3, n + 1)
op2, _, U2, V2, sp2, rp2 = numpy_matrix_operator_with_arrays_and_products_factory(
30, 30, 4, 3, n + 2)
op = BlockDiagonalOperator([op0, op1, op2])
sp = BlockDiagonalOperator([sp0, sp1, sp2])
rp = BlockDiagonalOperator([rp0, rp1, rp2])
U = op.source.make_array([U0, U1, U2])
V = op.range.make_array([V0, V1, V2])
return op, _, U, V, sp, rp
elif n == 9:
from pymor.operators.block import BlockDiagonalOperator, BlockOperator
from pymor.parameters.functionals import ProjectionParameterFunctional
op0a, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(
10, 10, 4, 3, n)
op0b, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
10, 10, 4, 3, n)
op0c, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(
20, 20, 4, 3, n + 1)
op2a, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
20, 10, 4, 3, n + 2)
op2b, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
20, 10, 4, 3, n + 2)
op0 = (op0a * ProjectionParameterFunctional('p', 3, 0) +
op0b * ProjectionParameterFunctional('p', 3, 1) +
op0c * ProjectionParameterFunctional('p', 3, 1))
op2 = (op2a * ProjectionParameterFunctional('p', 3, 0) +
op2b * ProjectionParameterFunctional('q', 1))
op = BlockOperator([[op0, op2], [None, op1]])
mu = op.parameters.parse({'p': [1, 2, 3], 'q': 4})
sp = BlockDiagonalOperator([sp0, sp1])
rp = BlockDiagonalOperator([rp0, rp1])
U = op.source.make_array([U0, U1])
V = op.range.make_array([V0, V1])
return op, mu, U, V, sp, rp
elif n == 10:
from pymor.operators.block import BlockDiagonalOperator, BlockColumnOperator
from pymor.parameters.functionals import ProjectionParameterFunctional
op0, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(
10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(
20, 20, 4, 3, n + 1)
op2a, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
20, 10, 4, 3, n + 2)
op2b, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
20, 10, 4, 3, n + 2)
op2 = (op2a * ProjectionParameterFunctional('p', 3, 0) +
op2b * ProjectionParameterFunctional('q', 1))
op = BlockColumnOperator([op2, op1])
mu = op.parameters.parse({'p': [1, 2, 3], 'q': 4})
sp = sp1
rp = BlockDiagonalOperator([rp0, rp1])
U = U1
V = op.range.make_array([V0, V1])
return op, mu, U, V, sp, rp
elif n == 11:
from pymor.operators.block import BlockDiagonalOperator, BlockRowOperator
from pymor.parameters.functionals import ProjectionParameterFunctional
op0, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(
10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(
20, 20, 4, 3, n + 1)
op2a, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
20, 10, 4, 3, n + 2)
op2b, _, _, _, _, _ = numpy_matrix_operator_with_arrays_and_products_factory(
20, 10, 4, 3, n + 2)
op2 = (op2a * ProjectionParameterFunctional('p', 3, 0) +
op2b * ProjectionParameterFunctional('q', 1))
op = BlockRowOperator([op0, op2])
mu = op.parameters.parse({'p': [1, 2, 3], 'q': 4})
sp = BlockDiagonalOperator([sp0, sp1])
rp = rp0
U = op.source.make_array([U0, U1])
V = V0
return op, mu, U, V, sp, rp
else:
assert False
def misc_operator_with_arrays_and_products_factory(n):
if n == 0:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 10, 4, 3, n)
op = ComponentProjection(np.random.randint(0, 100, 10), U.space)
return op, _, U, V, sp, rp
elif n == 1:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 0, 4, 3, n)
op = ComponentProjection([], U.space)
return op, _, U, V, sp, rp
elif n == 2:
from pymor.operators.constructions import ComponentProjection
_, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 3, 4, 3, n)
op = ComponentProjection([3, 3, 3], U.space)
return op, _, U, V, sp, rp
elif n == 3:
from pymor.operators.constructions import AdjointOperator
op, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 20, 4, 3, n)
op = AdjointOperator(op, with_apply_inverse=True)
return op, _, V, U, rp, sp
elif n == 4:
from pymor.operators.constructions import AdjointOperator
op, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(100, 20, 4, 3, n)
op = AdjointOperator(op, with_apply_inverse=False)
return op, _, V, U, rp, sp
elif 5 <= n <= 7:
from pymor.operators.constructions import SelectionOperator
from pymor.parameters.functionals import ProjectionParameterFunctional
op0, _, U, V, sp, rp = numpy_matrix_operator_with_arrays_and_products_factory(30, 30, 4, 3, n)
op1 = NumpyMatrixOperator(np.random.random((30, 30)))
op2 = NumpyMatrixOperator(np.random.random((30, 30)))
op = SelectionOperator([op0, op1, op2], ProjectionParameterFunctional('x', ()), [0.3, 0.6])
return op, op.parse_parameter((n-5)/2), V, U, rp, sp
elif n == 8:
from pymor.operators.block import BlockDiagonalOperator
from pymor.vectorarrays.block import BlockVectorArray
op0, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(20, 20, 4, 3, n+1)
op2, _, U2, V2, sp2, rp2 = numpy_matrix_operator_with_arrays_and_products_factory(30, 30, 4, 3, n+2)
op = BlockDiagonalOperator([op0, op1, op2])
sp = BlockDiagonalOperator([sp0, sp1, sp2])
rp = BlockDiagonalOperator([rp0, rp1, rp2])
U = BlockVectorArray([U0, U1, U2])
V = BlockVectorArray([V0, V1, V2])
return op, _, U, V, sp, rp
elif n == 9:
from pymor.operators.block import BlockDiagonalOperator, BlockOperator
from pymor.vectorarrays.block import BlockVectorArray
op0, _, U0, V0, sp0, rp0 = numpy_matrix_operator_with_arrays_and_products_factory(10, 10, 4, 3, n)
op1, _, U1, V1, sp1, rp1 = numpy_matrix_operator_with_arrays_and_products_factory(20, 20, 4, 3, n+1)
op2, _, U2, V2, sp2, rp2 = numpy_matrix_operator_with_arrays_and_products_factory(20, 10, 4, 3, n+2)
op = BlockOperator([[op0, op2],
[None, op1]])
sp = BlockDiagonalOperator([sp0, sp1])
rp = BlockDiagonalOperator([rp0, rp1])
U = BlockVectorArray([U0, U1])
V = BlockVectorArray([V0, V1])
return op, None, U, V, sp, rp
else:
assert False