def test_multisurf_Multiplexer():
""" Test MultiSURF on 6-bit Multiplexer """
#New parameters
options['algorithm'] = 'multisurf'
Scores = MS.runMultiSURF(header, x, y, attr, var, distArray, options)
print("MultiSURF + 6-bit Multiplexer ")
print(str(Scores))
#Check that score list is not empty
assert Scores != None
#Check that a score for all features is output
assert len(Scores) == 6 #6-bit Multiplexer problem
#Check that all scores fall between -1 and 1
assert max(Scores) <= 1 and min(Scores) >= -1
#Check that the address bits (indexed as features 0 and 1) have the top scores as expected.
indexTopScore = Scores.index(max(Scores))
assert indexTopScore == 0 or indexTopScore == 1
Scores.pop(indexTopScore)
indexTopScore = Scores.index(max(Scores))
assert indexTopScore == 0
def test_multisurfstar_GWAS_Sim():
""" Test MultiSURF* on GWAS_Sim """
#New parameters
options['algorithm'] = 'multisurfstar'
Scores = MS.runMultiSURF(header, x, y, attr, var, distArray, options)
print("MultiSURF* + GWAS_Sim ")
print(str(Scores))
#Check that score list is not empty
assert Scores != None
#Check that a score for all features is output
assert len(Scores) == 20 #GWAS simulated dataset
#Check that all scores fall between -1 and 1
assert max(Scores) <= 1 and min(Scores) >= -1
#Check that the address bits (indexed as features 0 and 1) have the top scores as expected.
indexTopScore = Scores.index(max(Scores))
assert indexTopScore == 18 or indexTopScore == 19
Scores.pop(indexTopScore)
indexTopScore = Scores.index(max(Scores))
assert indexTopScore == 18
def test_multisurf_GWAS_Sim():
""" Test MultiSURF on GWAS_Sim Multiclass"""
#New parameters
options['algorithm'] = 'multisurf'
Scores = MS.runMultiSURF(header, x, y, attr, var, distArray, options)
print("MultiSURF + GWAS_Sim MC")
print(str(Scores))
#Check that score list is not empty
assert Scores != None
#Check that a score for all features is output
assert len(Scores) == 20 #GWAS simulated dataset
#Check that all scores fall between -1 and 1
assert max(Scores) <= 1 and min(Scores) >= -1
#Check that the address bits (indexed as features 0 and 1) have the top scores as expected.
indexTopScore = Scores.index(max(Scores))
assert indexTopScore ==18 or indexTopScore == 19
Scores.pop(indexTopScore)
indexTopScore = Scores.index(max(Scores))
assert indexTopScore == 18
def test_multisurf_Multiplexer():
""" Test MultiSURF on 6-bit Multiplexer """
#New parameters
options['algorithm'] = 'multisurf'
Scores = MS.runMultiSURF(header, x, y, attr, var, distArray, options)
print("MultiSURF + 6-bit Multiplexer ")
print(str(Scores))
#Check that score list is not empty
assert Scores != None
#Check that a score for all features is output
assert len(Scores) == 6 #6-bit Multiplexer problem
#Check that all scores fall between -1 and 1
assert max(Scores) <= 1 and min(Scores) >= -1
#Check that the address bits (indexed as features 0 and 1) have the top scores as expected.
indexTopScore = Scores.index(max(Scores))
assert indexTopScore == 0 or indexTopScore == 1
Scores.pop(indexTopScore)
indexTopScore = Scores.index(max(Scores))
assert indexTopScore == 0
