Python collapse示例

示例#1

def coding_mutations_collapse(grouping="",
                              subgrouping="",
                              verbose=False,
                              type="mean",
                              header=True,
                              test=False,
                              expected=None):

    outfile = "coding_mutations"
    return rf.collapse(outfile,
                       outfile,
                       grouping=grouping,
                       subgrouping=subgrouping,
                       verbose=verbose,
                       type=type,
                       header=header,
                       test=test,
                       expected=expected)  ## the double outfile is correct. :P

示例#2

def degenerate_mutations_collapse(grouping="",
                                  subgrouping="",
                                  verbose=False,
                                  type="mean",
                                  header=True,
                                  test=False,
                                  expected=None):

    outfile = "degenerate_mutations"
    return rf.collapse(outfile,
                       outfile,
                       grouping=grouping,
                       subgrouping=subgrouping,
                       verbose=verbose,
                       type=type,
                       header=header,
                       test=test,
                       expected=expected)

示例#3

文件： fitness.py 项目： voidptr/ce_rapid_adaptation_data

def collapse(grouping="",
             subgrouping="",
             verbose=False,
             type="mean",
             test=False,
             expected=None,
             passoptions=""):

    outfile = "fitness"
    return rf.collapse(
        outfile,
        outfile,
        grouping=grouping,
        subgrouping=subgrouping,
        verbose=verbose,
        type=type,
        test=test,
        expected=expected,
        passoptions=passoptions)  ## the double outfile is correct. :P

示例#4

文件： mutations.py 项目： voidptr/research_scripts

def noncoding_mutations_collapse( grouping="", subgrouping="", verbose=False, type="mean", header=True, test=False, expected=None ): 

    outfile = "noncoding_mutations"
    return rf.collapse( outfile, outfile, grouping=grouping, subgrouping=subgrouping, verbose=verbose, type=type, header=header, test=test, expected=expected )

示例#5

文件： fitness.py 项目： voidptr/research_scripts

def collapse( grouping="", subgrouping="", verbose=False, type="mean", test=False, expected=None, passoptions="" ): 

    outfile = "fitness"
    return rf.collapse( outfile, outfile, grouping=grouping, subgrouping=subgrouping, verbose=verbose, type=type, test=test, expected=expected, passoptions=passoptions )  ## the double outfile is correct. :P