def test_pooled_caller(self):
peak_caller = idr.spp_peak_caller(spp_path)
control_replicates = idr.tagalign_split(self.control, nfiles=2)
experimental_replicates = idr.tagalign_split(self.experimental,
nfiles=2)
peaks = idr.call_peaks_on_pooled_replicates(control_replicates,
experimental_replicates,
peak_caller)
self.assertTrue(idr.file_exists(peaks))
self.assertTrue(idr.is_peak_file(peaks))
def test_spp_caller(self):
peak_caller = idr.spp_peak_caller(spp_path, cores=1)
peaks = peak_caller(self.control, self.experimental)
self.assertTrue(idr.file_exists(peaks))
self.assertTrue(idr.is_peak_file(peaks))