def region(geneid, genomeid):
"""
Queries for the instances of geneid in genomeid.
"""
results = sparql.find_regions(geneid, genomeid)
return Response.default(results)
def gene(geneid):
"""
Returns the metadata of a particular gene in json format.
"""
return Response.default(sparql.get_gene(geneid))
def regions(genomeid):
"""
Returns all the genes inside a particular genome
"""
return Response.default(sparql.find_alleles(genomeid))
def vfs():
"""
General query that returns all virulence factors.
"""
return Response.default(sparql.get_all_genes("vf"))
def amrs():
"""
General query that returns all antimicrobial resistance genes.
"""
return Response.default(sparql.get_all_genes("amr"))
def region(geneid, genomeid):
"""
Queries for the instances of geneid in genomeid.
"""
results = (sparql.find_regions(geneid, genomeid))
return Response.default(results)
def genes():
"""
General query that returns all genes and their metadata.
"""
return Response.default(sparql.get_all_genes())
def regions(genomeid):
"""
Returns all the genes inside a particular genome
"""
return Response.default(sparql.find_alleles(genomeid))
def gene(geneid):
"""
Returns the metadata of a particular gene in json format.
"""
return Response.default(sparql.get_gene(geneid))
def amrs():
"""
General query that returns all antimicrobial resistance genes.
"""
return Response.default(sparql.get_all_genes('amr'))
def vfs():
"""
General query that returns all virulence factors.
"""
return Response.default(sparql.get_all_genes('vf'))
def genes():
"""
General query that returns all genes and their metadata.
"""
return Response.default(sparql.get_all_genes())
