def region(geneid, genomeid): """ Queries for the instances of geneid in genomeid. """ results = sparql.find_regions(geneid, genomeid) return Response.default(results)
def gene(geneid): """ Returns the metadata of a particular gene in json format. """ return Response.default(sparql.get_gene(geneid))
def regions(genomeid): """ Returns all the genes inside a particular genome """ return Response.default(sparql.find_alleles(genomeid))
def vfs(): """ General query that returns all virulence factors. """ return Response.default(sparql.get_all_genes("vf"))
def amrs(): """ General query that returns all antimicrobial resistance genes. """ return Response.default(sparql.get_all_genes("amr"))
def region(geneid, genomeid): """ Queries for the instances of geneid in genomeid. """ results = (sparql.find_regions(geneid, genomeid)) return Response.default(results)
def genes(): """ General query that returns all genes and their metadata. """ return Response.default(sparql.get_all_genes())
def amrs(): """ General query that returns all antimicrobial resistance genes. """ return Response.default(sparql.get_all_genes('amr'))
def vfs(): """ General query that returns all virulence factors. """ return Response.default(sparql.get_all_genes('vf'))