def testCactus_RandomAlignmentsOnly(self): """Build mafs from cactusDisks containing no trees, faces or reference. """ runWorkflow_multipleExamples( getCactusInputs_random, #Just for the alignments. testNumber=TestStatus.getTestSetup(), makeMAFs=True, buildAvgs=False, buildReference=False)
def testCactus_Random(self): runWorkflow_multipleExamples(getCactusInputs_random, testNumber=TestStatus.getTestSetup(), makeCactusTreeStats=True)
def testCactus_Random(self): runWorkflow_multipleExamples(getCactusInputs_random, testNumber=TestStatus.getTestSetup(), buildCactusPDF=True, buildAdjacencyPDF=True)
def testCactus_Random(self): """Build mafs from cactusDisks containing trees, face and an reference (the output will include the MAFS ordered by reference) """ runWorkflow_multipleExamples(getCactusInputs_random, testNumber=TestStatus.getTestSetup(), makeMAFs=True)
def testCactus_Random(self): runWorkflow_multipleExamples(getCactusInputs_random, testNumber=TestStatus.getTestSetup(), buildCactusPDF=True, buildAdjacencyPDF=True)
def testCactus_Random(self): runWorkflow_multipleExamples(getCactusInputs_random, testNumber=TestStatus.getTestSetup(), makeCactusTreeStats=True)
def testCactus_Random(self): """Build mafs from cactusDisks containing trees, face and an reference (the output will include the MAFS ordered by reference) """ runWorkflow_multipleExamples(getCactusInputs_random, testNumber=TestStatus.getTestSetup(), makeMAFs=True)
def testCactus_RandomAlignmentsOnly(self): """Build mafs from cactusDisks containing no trees, faces or reference. """ runWorkflow_multipleExamples(getCactusInputs_random, #Just for the alignments. testNumber=TestStatus.getTestSetup(), makeMAFs=True,buildAvgs=False, buildReference=False)