def testCactus_RandomAlignmentsOnly(self):
"""Build mafs from cactusDisks containing no trees, faces or reference.
"""
runWorkflow_multipleExamples(
getCactusInputs_random, #Just for the alignments.
testNumber=TestStatus.getTestSetup(),
makeMAFs=True,
buildAvgs=False,
buildReference=False)
def testCactus_Random(self):
runWorkflow_multipleExamples(getCactusInputs_random,
testNumber=TestStatus.getTestSetup(),
makeCactusTreeStats=True)
def testCactus_Random(self):
runWorkflow_multipleExamples(getCactusInputs_random,
testNumber=TestStatus.getTestSetup(),
buildCactusPDF=True,
buildAdjacencyPDF=True)
def testCactus_Random(self):
"""Build mafs from cactusDisks containing trees, face and an reference (the output will include the MAFS ordered by reference)
"""
runWorkflow_multipleExamples(getCactusInputs_random,
testNumber=TestStatus.getTestSetup(),
makeMAFs=True)
def testCactus_Random(self):
runWorkflow_multipleExamples(getCactusInputs_random,
testNumber=TestStatus.getTestSetup(),
buildCactusPDF=True,
buildAdjacencyPDF=True)
def testCactus_Random(self):
runWorkflow_multipleExamples(getCactusInputs_random,
testNumber=TestStatus.getTestSetup(),
makeCactusTreeStats=True)
def testCactus_Random(self):
"""Build mafs from cactusDisks containing trees, face and an reference (the output will include the MAFS ordered by reference)
"""
runWorkflow_multipleExamples(getCactusInputs_random,
testNumber=TestStatus.getTestSetup(),
makeMAFs=True)
def testCactus_RandomAlignmentsOnly(self):
"""Build mafs from cactusDisks containing no trees, faces or reference.
"""
runWorkflow_multipleExamples(getCactusInputs_random, #Just for the alignments.
testNumber=TestStatus.getTestSetup(),
makeMAFs=True,buildAvgs=False, buildReference=False)
