def install_data_rsync(config_source):
"""Install data using pre-existing genomes from Galaxy rsync servers.
"""
_check_version()
genomes, genome_indexes, config = _get_genomes(config_source)
genome_indexes += [x for x in DEFAULT_GENOME_INDEXES if x not in genome_indexes]
genome_dir = _make_genome_dir()
galaxy.rsync_genomes(genome_dir, genomes, genome_indexes)
def install_data_rsync(config_source):
"""Install data using pre-existing genomes from Galaxy rsync servers.
"""
_check_version()
genomes, genome_indexes, config = _get_genomes(config_source)
genome_indexes += [x for x in DEFAULT_GENOME_INDEXES if x not in genome_indexes]
genome_dir = _make_genome_dir()
galaxy.rsync_genomes(genome_dir, genomes, genome_indexes)
def install_data_rsync(config_source):
"""Install data using pre-existing genomes from Galaxy rsync servers.
"""
_check_version()
genomes, genome_indexes, config = _get_genomes(config_source)
genome_indexes += [x for x in DEFAULT_GENOME_INDEXES if x not in genome_indexes]
# Galaxy stores FASTAs in ucsc format and generates on the fly
if "ucsc" not in genome_indexes:
genome_indexes.append("ucsc")
genome_dir = _make_genome_dir()
galaxy.rsync_genomes(genome_dir, genomes, genome_indexes)
def install_data_rsync(config_source):
"""Install data using pre-existing genomes from Galaxy rsync servers.
"""
_check_version()
genomes, genome_indexes, config = _get_genomes(config_source)
genome_indexes += [x for x in DEFAULT_GENOME_INDEXES if x not in genome_indexes]
# Galaxy stores FASTAs in ucsc format and generates on the fly
if "ucsc" not in genome_indexes:
genome_indexes.append("ucsc")
genome_dir = _make_genome_dir()
galaxy.rsync_genomes(genome_dir, genomes, genome_indexes)
