Beispiel #1
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 def testMapSplicedRead4(self):
     self.assertEqual(hw.mapSplicedRead("GTGGCCGGTAAACATAGATGTCTGGGGAACTTACCCTAAC", reads.lacDNA, 15), [417, 437, 9042, 9062] )
Beispiel #2
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 def testMapSplicedRead2(self):
     self.assertEqual(hw.mapSplicedRead("AACC", "GGAAGGCC",2), [2, 4, 6, 8])
Beispiel #3
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 def testMapSplicedRead3(self):
     self.assertEqual(hw.mapSplicedRead("CCAA", "GGAAGGCC",2), 'NOT FOUND')
Beispiel #4
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 def testMapSplicedRead1(self):
     self.assertEqual(hw.mapSplicedRead("ATT", "ATAT", 3), 'NOT FOUND')
Beispiel #5
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 def testMapSplicedRead4(self):
     self.assertEqual(
         hw.mapSplicedRead("GTGGCCGGTAAACATAGATGTCTGGGGAACTTACCCTAAC",
                           reads.lacDNA, 15), [417, 437, 9042, 9062])
Beispiel #6
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 def testMapSplicedRead3(self):
     self.assertEqual(hw.mapSplicedRead("CCAA", "GGAAGGCC", 2), 'NOT FOUND')
Beispiel #7
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 def testMapSplicedRead2(self):
     self.assertEqual(hw.mapSplicedRead("AACC", "GGAAGGCC", 2),
                      [2, 4, 6, 8])
Beispiel #8
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 def testMapSplicedRead1(self):
     self.assertEqual(hw.mapSplicedRead("ATT", "ATAT", 3), 'NOT FOUND')