def test_assemble(self):
from assembler import Assembler
assbl = Assembler(sequences, identifiers)
assbl._find_matching_pairs = MagicMock(return_value=(map_top_bottom,
map_bottom_top))
assbl._determine_order = MagicMock(return_value=order)
self.assertEqual(assbl.assemble(), assembled_seq)
def test_find_matching_pairs(self):
from assembler import Assembler
assbl = Assembler(sequences)
a, b, c, d = assbl._find_matching_pairs()
self.assertEqual(c, top_ranges_dict)
self.assertEqual(d, bottom_ranges_dict)
self.assertEqual(a, top_seq_dict)
self.assertEqual(b, bottom_seq_dict)
def test_assemble(self):
from assembler import Assembler
assbl = Assembler(sequences)
assbl._find_matching_pairs = MagicMock(return_value=(top_seq_dict, bottom_seq_dict, top_ranges_dict, bottom_ranges_dict))
assbl._determine_order = MagicMock(return_value=order)
self.assertEqual(assbl.assemble(), assembled_seq)
