def geneCalc(dict_information, gene):
#Lo primero de todo_ es sacar la secuencia
sequence = dict_information['seq']
#Una vez tenemos la secuencia...
correct_dna = Seq.is_valid_sequence_2(sequence)
if correct_dna: # Same as : if correct_dna == True:
argument_object = Seq(sequence)
a, g, c, t = argument_object.count_bases(
) # De esta manera solo se ejecuta el bucle una vez cuando hacemos luego el print
percent = f"""
A: {a} ({calculate_percentaje(a, sequence)} %)
C: {c} ({calculate_percentaje(c, sequence)} %)
G: {g} ({calculate_percentaje(g, sequence)} %)
T: {t} ({calculate_percentaje(t, sequence)} %)""" #MANDAMOS EL CÓDIGO SÓLO UNA VEZ, PORQUE SI NO, ConnectionResetError: [WinError 10054]
length = len(sequence)
context = {'percent': percent, 'length': length}
return context
else:
percent = 'The percentages can not be calculated. Introduce a correct sequence. '
length = len(sequence)
context = {'percent': percent, 'length': length}
return context
def info(cs, argument):
print_colored('INFO', 'yellow')
print('Sequence:', argument)
correct_dna = Seq.is_valid_sequence_2(argument)
if correct_dna: # Same as : if correct_dna == True:
argument_object = Seq(argument)
a, g, c, t = argument_object.count_bases(
) # De esta manera solo se ejecuta el bucle una vez cuando hacemos luego el print
response = f""" Sequence: {argument}
Total length: {len(argument)}
A: {a} {calculate_percentaje(a, argument)} %
C: {c} {calculate_percentaje(c, argument)} %
G: {g} {calculate_percentaje(g, argument)} %
T: {t} {calculate_percentaje(t, argument)} %""" #MANDAMOS EL CÓDIGO SÓLO UNA VEZ, PORQUE SI NO, ConnectionResetError: [WinError 10054]
print(response)
cs.send(response.encode())
else:
print('The seq_dna is not correct. Please introduce another one.')
def info(
sequence, operation
): #Esto es lo que se envía desde el server: contents = su.info(sequence, operation)
correct_dna = Seq.is_valid_sequence_2(sequence)
if correct_dna: # Same as : if correct_dna == True:
argument_object = Seq(sequence)
a, g, c, t = argument_object.count_bases(
) # De esta manera solo se ejecuta el bucle una vez cuando hacemos luego el print
result = f""" Sequence: {sequence}
Total length: {len(sequence)}
A: {a} ({calculate_percentaje(a, sequence)} %)
C: {c} ({calculate_percentaje(c, sequence)} %)
G: {g} ({calculate_percentaje(g, sequence)} %)
T: {t} ({calculate_percentaje(t, sequence)} %)""" #MANDAMOS EL CÓDIGO SÓLO UNA VEZ, PORQUE SI NO, ConnectionResetError: [WinError 10054]
context = {
'sequence': sequence,
'operation': operation,
'result': result
}
contents = read_template_html_file('./html/operation.html').render(
context=context)
return contents
else:
result = 'The result can not be calculated. Introduce a correct sequence. '
context = {
'sequence': sequence,
'operation': operation,
'result': result
}
contents = read_template_html_file('./html/operation.html').render(
context=context)
return contents
